Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p14350 Brassica napus
A05p35010 Brassica napus
A06p13120 Brassica napus
A08p31060 Brassica napus
A09p60500 Brassica napus
A10p12300 Brassica napus
Aa31LG3G10890 Aethionema arabicum
Aa31LG4G2600 Aethionema arabicum
Aa31LG8G1640 Aethionema arabicum
Actinidia05091 Actinidia chinensis
Actinidia12336 Actinidia chinensis
Actinidia20601 Actinidia chinensis
Ah.06g190820 Amaranthus hybridus
AL1G29440 Arabidopsis lyrata
AL3G26720 Arabidopsis lyrata
AL8G30450 Arabidopsis lyrata
Aqoxy1G02113 Aquilegia oxysepala
Aqoxy7G00906 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60CVB0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NCE19X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U21G6C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WWQ11A Arachis hypogaea
AT1G17200 Arabidopsis thaliana
AT3G14380 Arabidopsis thaliana
AT5G54980 Arabidopsis thaliana
ATR0006G070 Amborella trichopoda
ATR0794G005 Amborella trichopoda
Atru.chr2.1824 Acer truncatum
Atru.chr2.3449 Acer truncatum
AUR62015787 Chenopodium quinoa
AUR62019445 Chenopodium quinoa
AUR62039186 Chenopodium quinoa
BcaB01g04339 Brassica carinata
BcaB03g13013 Brassica carinata
BcaB06g25390 Brassica carinata
BcaB07g34042 Brassica carinata
BcaB08g35863 Brassica carinata
BcaC01g06333 Brassica carinata
BcaC01g06334 Brassica carinata
BcaC04g20280 Brassica carinata
BcaC05g25657 Brassica carinata
BcaC05g29088 Brassica carinata
BcaC07g38834 Brassica carinata
BcaC07g41408 Brassica carinata
BcaC07g41432 Brassica carinata
BolC3t14093H Brassica oleracea
BolC5t30269H Brassica oleracea
BolC5t33973H Brassica oleracea
BolC8t49401H Brassica oleracea
BolC8t51948H Brassica oleracea
BolC9t57427H Brassica oleracea
BraA03t10732Z Brassica rapa
BraA05t22315Z Brassica rapa
BraA06t24470Z Brassica rapa
BraA08t35034Z Brassica rapa
BraA09t41421Z Brassica rapa
BraA10t43324Z Brassica rapa
C03p16730 Brassica napus
C05p15620 Brassica napus
C05p52960 Brassica napus
C08p17750 Brassica napus
C08p43990 Brassica napus
C09p45550 Brassica napus
CANSAT11G1809 Cannabis sativa
CANSAT35G0030 Cannabis sativa
CARHR017780 Cardamine hirsuta
CARHR089400 Cardamine hirsuta
CARHR268320 Cardamine hirsuta
Carub.0001s1695 Capsella rubella
Carub.0003s1409 Capsella rubella
Carub.0008s1527 Capsella rubella
Ca_05752_v3 Cicer arietinum L.
Ca_08866_v3 Cicer arietinum L.
Ca_29735_v3 Cicer arietinum L.
Cc05_g09960 Coffea canephora
Cc05_g13900 Coffea canephora
CDE04G2121 Ceratophyllum demersum
CDE06G1188 Ceratophyllum demersum
CDE11G0801 Ceratophyllum demersum
Cfa007733 Carpinus fangiana
Cfa007735 Carpinus fangiana
Ciclev10009601m.g Citrus clementina
Ciclev10022266m.g Citrus clementina
CiPaw.03G079800 Carya illinoinensis
CiPaw.04G050500 Carya illinoinensis
CiPaw.11G190900 Carya illinoinensis
CiPaw.12G130700 Carya illinoinensis
ClCG07G010640 Citrullus lanatus
ClCG10G005310 Citrullus lanatus
COL.COLO4_09668 Corchorus olitorius
COL.COLO4_17388 Corchorus olitorius
Cpa.g.sc12.294 Carica papaya
Cpa.g.sc25.209 Carica papaya
CsaV3_3G005020 Cucumis sativus L.
CsaV3_4G007660 Cucumis sativus L.
CSS0000059 Camellia sinensis var. sinensis
CSS0006609 Camellia sinensis var. sinensis
CSS0043656 Camellia sinensis var. sinensis
DCAR_013809 Daucus carota
DCAR_017558 Daucus carota
DCAR_019647 Daucus carota
DCAR_022569 Daucus carota
Dinv21342 Davidia involucrata
Dinv26634 Davidia involucrata
Duzib213G0138 Durio zibethinus
Duzib268G0621 Durio zibethinus
ECA236G2193 Erigeron canadensis
ECA246G0720 Erigeron canadensis
EL10Ac4g07795 Beta vulgaris
EL10Ac4g08532 Beta vulgaris
Eucgr.F00751 Eucalyptus grandis
Eucgr.F03189 Eucalyptus grandis
FAN08G3406 Fragaria x ananassa
FAN13G0338 Fragaria x ananassa
FAN16G1564 Fragaria x ananassa
FAN18G2236 Fragaria x ananassa
FAN21G3514 Fragaria x ananassa
FAN25G0141 Fragaria x ananassa
FvH4_3g22910 Fragaria vesca
FvH4_5g24950 Fragaria vesca
Glyma.01G077100 Glycine max
Glyma.11G208600 Glycine max
Glyma.14G208900 Glycine max
Glyma.18G045300 Glycine max
Gohir.A01G040500 Gossypium hirsutum
Gohir.A04G014200 Gossypium hirsutum
Gohir.D01G028100 Gossypium hirsutum
Gohir.D05G372100 Gossypium hirsutum
Gorai.002G037500 Gossypium raimondii
Gorai.009G440300 Gossypium raimondii
GSVIVG01010256001 Vitis vinifera
GSVIVG01037665001 Vitis vinifera
HanXRQChr05g0159531 Helianthus annuus
HanXRQChr11g0330051 Helianthus annuus
HanXRQChr15g0492391 Helianthus annuus
Haze_14346 Corylus avellana
Hma1.2p1_0854F.1_g228830 Hydrangea macrophylla
HPP92_013038 Vanilla planifolia
HPP92_017593 Vanilla planifolia
Hund01986 Selenicereus undatus
Hund02297 Selenicereus undatus
Lalb_Chr04g0251551 Lupinus albus
Lalb_Chr15g0085341 Lupinus albus
Lalb_Chr19g0127441 Lupinus albus
Lj1g0027370 Lotus japonicus
Lj6g0007059 Lotus japonicus
Lj8A170T79 Lonicera japonica
Lj8C140T3 Lonicera japonica
LjContig00141g0008303 Lotus japonicus
Lsat_1_v5_gn_2_30500 Lactuca sativa
Lsat_1_v5_gn_4_50060 Lactuca sativa
Lsat_1_v5_gn_5_171181 Lactuca sativa
Lsat_1_v5_gn_5_3861 Lactuca sativa
Lsat_1_v5_gn_7_99420 Lactuca sativa
Manes.03G090700 Manihot esculenta
Manes.03G130600 Manihot esculenta
Manes.15G101200 Manihot esculenta
MBI02_g05874_MAGBIO Magnolia biondii
MBI02_g28410_MAGBIO Magnolia biondii
MBI13_g05968_MAGBIO Magnolia biondii
MD03G1199400 Malus domestica
MD06G1011400 Malus domestica
MD11G1216200 Malus domestica
MD11G1216300 Malus domestica
Medtr0160s0040 Medicago truncatula
Medtr3g064310 Medicago truncatula
Medtr5g076480 Medicago truncatula
MELO3C016174.2 Cucumis melo
MELO3C025364.2 Cucumis melo
Migut.H01821 Erythranthe guttata
Migut.H02055 Erythranthe guttata
Migut.M01749 Erythranthe guttata
MSTRG.14263 Avicennia marina
MSTRG.14436 Avicennia marina
MSTRG.6927 Avicennia marina
Nitab4.5_0000168g0140 Nicotiana tabacum
Nitab4.5_0000923g0230 Nicotiana tabacum
Nitab4.5_0001612g0150 Nicotiana tabacum
Nitab4.5_0002209g0090 Nicotiana tabacum
Nitab4.5_0004166g0060 Nicotiana tabacum
Nitab4.5_0012771g0010 Nicotiana tabacum
Nn002s41371 Nelumbo nucifera
Nn1g07143 Nelumbo nucifera
Nn2g11844 Nelumbo nucifera
Nn3g17448 Nelumbo nucifera
Oeu012704.1 Olea europaea
Oeu034033.1 Olea europaea
Oeu058438.1 Olea europaea
Oeu059244.1 Olea europaea
Os02g0219900 Oryza sativa ssp. japonica
Os04g0281900 Oryza sativa ssp. japonica
Peaxi162Scf00111g00526 Petunia axillaris
Peaxi162Scf00660g00038 Petunia axillaris
PGR031G2898 Punica granatum
PGR083G1862 Punica granatum
PGSC0003DMG400021246 Solanum tuberosum
PGSC0003DMG400027868 Solanum tuberosum
PGSC0003DMG400031087 Solanum tuberosum
Phvul.006G085522 Phaseolus vulgaris
Phvul.006G085600 Phaseolus vulgaris
Phvul.008G144000 Phaseolus vulgaris
Phvul.008G242000 Phaseolus vulgaris
Potri.001G436400 Populus trichocarpa
Potri.008G052451 Populus trichocarpa
Potri.010G208300 Populus trichocarpa
Potri.011G140200 Populus trichocarpa
Pp3c7_10840 Physcomitrium patens
Prupe.4G215200 Prunus persica
Prupe.5G013700 Prunus persica
Psat0s140g0040 Pisum sativum
Psat2g044080 Pisum sativum
Psat3g159280 Pisum sativum
PSO063G4850 Papaver somniferum
PSO063G5128 Papaver somniferum
PSO210G5772 Papaver somniferum
PSO541G0772 Papaver somniferum
PSO541G3037 Papaver somniferum
PSO541G6174 Papaver somniferum
PSO675G7145 Papaver somniferum
PSO782G4744 Papaver somniferum
QL02p063963 Quercus lobata
QL07p008221 Quercus lobata
RcHm_v2.0_Chr5g0040241 Rosa chinensis
RcHm_v2.0_Chr7g0215251 Rosa chinensis
Rhsim06G0183200 Rhododendron simsii
Rhsim06G0218300 Rhododendron simsii
Sabra10G0161000 Salix brachista
Sabra11G0126300 Salix brachista
SalBow7G1952 Salvia bowleyana
SalBow7G3076 Salvia bowleyana
Sc03g0007850 Simmondsia chinensis
Sc16g0005950 Simmondsia chinensis
Sed0013637 Sechium edule
Sed0024598 Sechium edule
SEGI_07260 Sequoiadendron giganteum
SEGI_26504 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02145 Striga asiatica
SMO367G0421 Selaginella moellendorffii
Solyc07g056040.3 Solanum lycopersicum
Solyc10g007660.3 Solanum lycopersicum
Solyc12g005070.2 Solanum lycopersicum
Sopen07g029390 Solanum pennellii
Sopen10g003570 Solanum pennellii
Sopen12g001070 Solanum pennellii
Sp1g15340 Schrenkiella parvula
Sp3g12670 Schrenkiella parvula
Sp6g16930 Schrenkiella parvula
TAR626G0125 Trochodendron aralioides
TAR629G0846 Trochodendron aralioides
THA.LOC104808074 Tarenaya hassleriana
THA.LOC104811612 Tarenaya hassleriana
THA.LOC104813973 Tarenaya hassleriana
Thecc.07G034500 Theobroma cacao
Thecc.07G148900 Theobroma cacao
Thhalv10008792m.g Eutrema salsugineum
Thhalv10014758m.g Eutrema salsugineum
Thhalv10021621m.g Eutrema salsugineum
TPR.G35761 Trifolium pratense
TPR.G37302 Trifolium pratense
TPR.G37303 Trifolium pratense
TPR.G37309 Trifolium pratense
TPR.G39100 Trifolium pratense
TPR.G40028 Trifolium pratense
TWI38G1248 Tripterygium wilfordii
TWI39G1036 Tripterygium wilfordii
unitig_37.g12552 Utricularia gibba
unitig_746.g26691 Utricularia gibba
vmacro02229 Vaccinium macrocarpon
vmacro12031 Vaccinium macrocarpon
VMungo0540G0958 Vigna mungo
VMungo0647G1093 Vigna mungo
VMungo1383G0877 Vigna mungo
Zm00001eb087050 Zea mays
Zm00001eb240120 Zea mays
Zm00001eb420360 Zea mays

User provided reference genes

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