Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22280 Brassica napus
A07p43900 Brassica napus
A07p43910 Brassica napus
Aa31LG4G2320 Aethionema arabicum
Aa31LG4G2330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1354 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2647 Anthoceros agrestis
Actinidia07509 Actinidia chinensis
Actinidia12591 Actinidia chinensis
Actinidia12600 Actinidia chinensis
Actinidia37023 Actinidia chinensis
Ah.04g164060 Amaranthus hybridus
AL2G39030 Arabidopsis lyrata
AL2G39060 Arabidopsis lyrata
Aqoxy1G01922 Aquilegia oxysepala
Aqoxy1G01990 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4IG6PJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.69X35Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EQXZ2A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9SFGX Arachis hypogaea
AT1G78630 Arabidopsis thaliana
AT1G78650 Arabidopsis thaliana
ATR0012G041 Amborella trichopoda
ATR0800G053 Amborella trichopoda
Atru.chr10.1169 Acer truncatum
Atru.chr2.2011 Acer truncatum
Atru.chr2.2062 Acer truncatum
AUR62019605 Chenopodium quinoa
AUR62019642 Chenopodium quinoa
AUR62037577 Chenopodium quinoa
AUR62039507 Chenopodium quinoa
AUR62039587 Chenopodium quinoa
BcaB05g25148 Brassica carinata
BcaB05g25149 Brassica carinata
BcaC03g15828 Brassica carinata
BcaC08g47422 Brassica carinata
BcaC08g47423 Brassica carinata
BcaC08g47424 Brassica carinata
BcaC08g47426 Brassica carinata
BolC6t40272H Brassica oleracea
BraA02t07233Z Brassica rapa
BraA07t31897Z Brassica rapa
C02p35700 Brassica napus
C03p92730 Brassica napus
C06p52530 Brassica napus
CAN.G375.47 Capsicum annuum
CAN.G443.1 Capsicum annuum
CAN.G904.34 Capsicum annuum
CANSAT35G1635 Cannabis sativa
CANSAT56G0836 Cannabis sativa
CARHR072150 Cardamine hirsuta
CARHR072180 Cardamine hirsuta
Carub.0002s2548 Capsella rubella
Carub.0002s2550 Capsella rubella
Ca_03951_v3 Cicer arietinum L.
Ca_07451_v3 Cicer arietinum L.
CBR_g36415 Chara braunii
CBR_g88534 Chara braunii
Cc05_g10750 Coffea canephora
Cc05_g10930 Coffea canephora
CDE04G3284 Ceratophyllum demersum
CDE10G1050 Ceratophyllum demersum
CDE10G1087 Ceratophyllum demersum
Cfa019511 Carpinus fangiana
Cfa019543 Carpinus fangiana
Ciclev10019497m.g Citrus clementina
Ciclev10021899m.g Citrus clementina
CiPaw.12G110400 Carya illinoinensis
CiPaw.12G112400 Carya illinoinensis
ClCG11G017210 Citrullus lanatus
ClCG11G017390 Citrullus lanatus
COL.COLO4_17511 Corchorus olitorius
Cpa.g.sc77.52 Carica papaya
Cpa.g.sc77.57 Carica papaya
Cre03.g202250 Chlamydomonas reinhardtii
Cre06.g264350 Chlamydomonas reinhardtii
CsaV3_4G032830 Cucumis sativus L.
CsaV3_4G033030 Cucumis sativus L.
CSS0001384 Camellia sinensis var. sinensis
CSS0019439 Camellia sinensis var. sinensis
DCAR_013269 Daucus carota
DCAR_019610 Daucus carota
DCAR_019612 Daucus carota
DCAR_032089 Daucus carota
Dinv13366 Davidia involucrata
Dinv18382 Davidia involucrata
Dinv26710 Davidia involucrata
Duzib213G0380 Durio zibethinus
ECA236G2857 Erigeron canadensis
ECA240G3886 Erigeron canadensis
EL10Ac4g08382 Beta vulgaris
EL10Ac4g08413 Beta vulgaris
Eucgr.F01252 Eucalyptus grandis
Eucgr.F01259 Eucalyptus grandis
Eucgr.F01264 Eucalyptus grandis
Eucgr.F01317 Eucalyptus grandis
Eucgr.F01365 Eucalyptus grandis
FAN11G3657 Fragaria x ananassa
FAN16G1664 Fragaria x ananassa
FAN16G1979 Fragaria x ananassa
FAN21G2329 Fragaria x ananassa
FAN25G2808 Fragaria x ananassa
FvH4_3g17780 Fragaria vesca
FvH4_3g18120 Fragaria vesca
Glyma.12G231200 Glycine max
Glyma.13G268300 Glycine max
Glyma.15G209000 Glycine max
Gohir.A01G048100 Gossypium hirsutum
Gohir.A01G051000 Gossypium hirsutum
Gohir.A01G051100 Gossypium hirsutum
Gohir.A02G070000 Gossypium hirsutum
Gohir.A04G043100 Gossypium hirsutum
Gohir.A05G263900 Gossypium hirsutum
Gohir.A11G265333 Gossypium hirsutum
Gohir.A13G150900 Gossypium hirsutum
Gohir.D01G038800 Gossypium hirsutum
Gohir.D01G040900 Gossypium hirsutum
Gohir.D05G340400 Gossypium hirsutum
Gohir.D13G155000 Gossypium hirsutum
Gorai.002G048000 Gossypium raimondii
Gorai.002G051000 Gossypium raimondii
Gorai.009G366800 Gossypium raimondii
Gorai.013G175400 Gossypium raimondii
GSVIVG01014101001 Vitis vinifera
GSVIVG01014168001 Vitis vinifera
HanXRQChr03g0060471 Helianthus annuus
HanXRQChr13g0389701 Helianthus annuus
HanXRQChr14g0429531 Helianthus annuus
HanXRQChr15g0495181 Helianthus annuus
Haze_09242 Corylus avellana
Haze_09304 Corylus avellana
Hma1.2p1_0050F.1_g028830 Hydrangea macrophylla
Hma1.2p1_0081F.1_g042300 Hydrangea macrophylla
HPP92_005570 Vanilla planifolia
HPP92_024061 Vanilla planifolia
Hund10438 Selenicereus undatus
Hund10543 Selenicereus undatus
Lalb_Chr01g0006901 Lupinus albus
Lalb_Chr20g0109181 Lupinus albus
Lalb_Chr25g0285731 Lupinus albus
Lj1A825T64 Lonicera japonica
Lj3g0015531 Lotus japonicus
Lj3g0025969 Lotus japonicus
Lj8C147T4 Lonicera japonica
Lsat_1_v5_gn_7_102200 Lactuca sativa
Lsat_1_v5_gn_9_100460 Lactuca sativa
Manes.03G099700 Manihot esculenta
Manes.15G097600 Manihot esculenta
Mapoly0006s0176 Marchantia polymorpha
Mapoly0011s0137 Marchantia polymorpha
MBI06_g08526_MAGBIO Magnolia biondii
MBI06_g08527_MAGBIO Magnolia biondii
MCO07G320 Micromonas commoda
MCO14G309 Micromonas commoda
MD03G1244500 Malus domestica
MD03G1244600 Malus domestica
MD03G1248000 Malus domestica
MD11G1266100 Malus domestica
MD11G1269500 Malus domestica
Medtr2g075820 Medicago truncatula
Medtr8g054450 Medicago truncatula
MELO3C025646.2 Cucumis melo
MELO3C025669.2 Cucumis melo
Migut.H02022 Erythranthe guttata
Migut.M00711 Erythranthe guttata
MSTRG.14251 Avicennia marina
MSTRG.14972 Avicennia marina
Nitab4.5_0000092g0390 Nicotiana tabacum
Nitab4.5_0000383g0070 Nicotiana tabacum
Nitab4.5_0004042g0010 Nicotiana tabacum
Nn3g21012 Nelumbo nucifera
Nn3g21014 Nelumbo nucifera
Nn3g21096 Nelumbo nucifera
Oeu010028.4 Olea europaea
Oeu025328.2 Olea europaea
Oeu058458.1 Olea europaea
Os01g0204000 Oryza sativa ssp. japonica
Os01g0749200 Oryza sativa ssp. japonica
Peaxi162Scf00000g07410 Petunia axillaris
Peaxi162Scf00013g00028 Petunia axillaris
Peaxi162Scf00111g01331 Petunia axillaris
Peaxi162Scf00692g00318 Petunia axillaris
PGR083G1274 Punica granatum
PGR083G1533 Punica granatum
PGR142G3065 Punica granatum
PGSC0003DMG400007062 Solanum tuberosum
PGSC0003DMG400015392 Solanum tuberosum
PGSC0003DMG400021257 Solanum tuberosum
Phvul.005G080800 Phaseolus vulgaris
Phvul.011G168200 Phaseolus vulgaris
Potri.001G384600 Populus trichocarpa
Potri.001G387300 Populus trichocarpa
Potri.011G106100 Populus trichocarpa
Pp3c20_2980 Physcomitrium patens
Pp3c24_18330 Physcomitrium patens
Pp3c27_7450 Physcomitrium patens
Pp3c8_22490 Physcomitrium patens
PRCOL_00006181 Prasinoderma coloniale
Prupe.4G156900 Prunus persica
Prupe.4G160000 Prunus persica
Psat0s2485g0160 Pisum sativum
Psat4g140640 Pisum sativum
PSO170G5902 Papaver somniferum
PSO528G0086 Papaver somniferum
PSO541G2585 Papaver somniferum
PSO541G6050 Papaver somniferum
PSO675G8136 Papaver somniferum
QL08p024701 Quercus lobata
QL08p025729 Quercus lobata
RcHm_v2.0_Chr2g0102431 Rosa chinensis
RcHm_v2.0_Chr5g0029571 Rosa chinensis
RcHm_v2.0_Chr5g0030181 Rosa chinensis
RcHm_v2.0_Chr5g0030251 Rosa chinensis
RcHm_v2.0_Chr5g0030351 Rosa chinensis
RcHm_v2.0_Chr5g0030441 Rosa chinensis
RcHm_v2.0_Chr5g0030521 Rosa chinensis
Rhsim06G0210300 Rhododendron simsii
Rhsim06G0211400 Rhododendron simsii
Sabra16G0253200 Salix brachista
SalBow1G0777 Salvia bowleyana
SalBow7G3921 Salvia bowleyana
SalBow8G0660 Salvia bowleyana
Sc03g0010610 Simmondsia chinensis
Sc16g0007720 Simmondsia chinensis
Sed0014572 Sechium edule
Sed0025986 Sechium edule
Sed0027576 Sechium edule
SEGI_01417 Sequoiadendron giganteum
SEGI_16031 Sequoiadendron giganteum
SEGI_19501 Sequoiadendron giganteum
SEGI_24754 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34270 Striga asiatica
SGA_v2.0_scaffold181G39753 Striga asiatica
SGA_v2.0_scaffold73G24396 Striga asiatica
SMO116G0167 Selaginella moellendorffii
Solyc07g062190.4 Solanum lycopersicum
Solyc10g007400.4 Solanum lycopersicum
Solyc12g014390.3 Solanum lycopersicum
Sopen07g030470 Solanum pennellii
Sopen10g003230 Solanum pennellii
Sopen12g006160 Solanum pennellii
Sp5g33720 Schrenkiella parvula
Sp5g33730 Schrenkiella parvula
SpUn0074_0010 Schrenkiella parvula
TAR626G0804 Trochodendron aralioides
TAR627G0084 Trochodendron aralioides
TAR627G0906 Trochodendron aralioides
THA.LOC104808089 Tarenaya hassleriana
THA.LOC104813996 Tarenaya hassleriana
Thecc.07G126400 Theobroma cacao
Thecc.07G130500 Theobroma cacao
Thhalv10018425m.g Eutrema salsugineum
Thhalv10019066m.g Eutrema salsugineum
TPR.G16056 Trifolium pratense
TPR.G16476 Trifolium pratense
TWI38G1964 Tripterygium wilfordii
TWI39G0752 Tripterygium wilfordii
vmacro11955 Vaccinium macrocarpon
vmacro11967 Vaccinium macrocarpon
VMungo1080G0044 Vigna mungo
VMungo1127G1496 Vigna mungo
Zm00001eb002150 Zea mays
Zm00001eb017750 Zea mays
Zm00001eb024250 Zea mays
Zm00001eb038850 Zea mays
Zm00001eb100520 Zea mays
Zm00001eb120810 Zea mays
Zm00001eb137460 Zea mays
Zm00001eb188790 Zea mays
Zm00001eb309500 Zea mays
Zm00001eb309510 Zea mays
Zm00001eb317290 Zea mays
Zm00001eb319080 Zea mays
Zm00001eb338160 Zea mays
Zm00001eb343810 Zea mays
Zm00001eb370750 Zea mays
Zm00001eb409150 Zea mays

User provided reference genes

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