Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01770 Brassica napus
Aa31LG1G26220 Aethionema arabicum
Aa31LG1G26230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4426 Anthoceros agrestis
Actinidia05159 Actinidia chinensis
Actinidia05784 Actinidia chinensis
Actinidia09135 Actinidia chinensis
Actinidia12632 Actinidia chinensis
Actinidia12633 Actinidia chinensis
Actinidia21619 Actinidia chinensis
Actinidia21620 Actinidia chinensis
Actinidia21621 Actinidia chinensis
Actinidia21622 Actinidia chinensis
Actinidia30947 Actinidia chinensis
Ah.05g177720 Amaranthus hybridus
Ah.09g234080 Amaranthus hybridus
Ah.12g065210 Amaranthus hybridus
Ah.14g087520 Amaranthus hybridus
AL5G42450 Arabidopsis lyrata
Aqoxy3G02549 Aquilegia oxysepala
Aqoxy3G02578 Aquilegia oxysepala
Aqoxy5G00744 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7WKR24 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B3T47G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E50ITV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K0SAPT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RMV9AI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X3YRCT Arachis hypogaea
AT3G60240 Arabidopsis thaliana
ATR0665G061 Amborella trichopoda
ATR0665G459 Amborella trichopoda
Atru.chr5.83 Acer truncatum
AUR62012822 Chenopodium quinoa
AUR62013779 Chenopodium quinoa
AUR62021834 Chenopodium quinoa
AUR62023377 Chenopodium quinoa
AUR62023378 Chenopodium quinoa
BcaB02g07527 Brassica carinata
BcaB02g07529 Brassica carinata
BcaB02g08185 Brassica carinata
BcaC02g10120 Brassica carinata
BcaC08g44916 Brassica carinata
BolC4t24814H Brassica oleracea
BolC6t37703H Brassica oleracea
BraA04t15901Z Brassica rapa
C04p32490 Brassica napus
C06p25420 Brassica napus
CAN.G473.60 Capsicum annuum
CAN.G572.30 Capsicum annuum
CAN.G756.24 Capsicum annuum
CAN.G756.25 Capsicum annuum
CANSAT25G1747 Cannabis sativa
CANSAT25G3091 Cannabis sativa
CARHR170550 Cardamine hirsuta
Carub.0005s2698 Capsella rubella
Ca_07449_v3 Cicer arietinum L.
Ca_07457_v3 Cicer arietinum L.
Ca_07458_v3 Cicer arietinum L.
Ca_26653_v3 Cicer arietinum L.
CBR_g5728 Chara braunii
Cc02_g25480 Coffea canephora
Cc02_g25500 Coffea canephora
CDE04G0084 Ceratophyllum demersum
CDE04G1252 Ceratophyllum demersum
CDE12G0588 Ceratophyllum demersum
CDE12G0937 Ceratophyllum demersum
Cfa011034 Carpinus fangiana
Cfa011035 Carpinus fangiana
Cfa026365 Carpinus fangiana
Ciclev10018460m.g Citrus clementina
Ciclev10024023m.g Citrus clementina
CiPaw.13G022800 Carya illinoinensis
CiPaw.14G017500 Carya illinoinensis
ClCG05G002950 Citrullus lanatus
ClCG06G008200 Citrullus lanatus
COL.COLO4_12362 Corchorus olitorius
Cpa.g.sc52.77 Carica papaya
Cpa.g.sc52.78 Carica papaya
CsaV3_2G010940 Cucumis sativus L.
CsaV3_3G010520 Cucumis sativus L.
DCAR_015791 Daucus carota
DCAR_015792 Daucus carota
DCAR_025035 Daucus carota
DCAR_025036 Daucus carota
DCAR_025037 Daucus carota
Dinv20140 Davidia involucrata
Dinv20141 Davidia involucrata
Dinv25157 Davidia involucrata
Dinv43594 Davidia involucrata
Dinv44034 Davidia involucrata
Duzib133G0420 Durio zibethinus
Duzib268G1041 Durio zibethinus
ECA234G3603 Erigeron canadensis
ECA234G4043 Erigeron canadensis
ECA248G0883 Erigeron canadensis
EL10Ac1g00728 Beta vulgaris
EL10Ac3g06052 Beta vulgaris
EL10Ac8g20227 Beta vulgaris
EL10Ac8g20496 Beta vulgaris
Eucgr.E01663 Eucalyptus grandis
FAN01G1077 Fragaria x ananassa
FAN03G1881 Fragaria x ananassa
FAN06G2407 Fragaria x ananassa
FAN10G2462 Fragaria x ananassa
FAN10G3097 Fragaria x ananassa
FvH4_7g08960 Fragaria vesca
Glyma.01G094200 Glycine max
Glyma.03G106500 Glycine max
Glyma.07G117800 Glycine max
Glyma.08G340500 Glycine max
Gohir.A08G028700 Gossypium hirsutum
Gohir.A08G140400 Gossypium hirsutum
Gohir.A12G098600 Gossypium hirsutum
Gohir.A12G099000 Gossypium hirsutum
Gohir.D08G039366 Gossypium hirsutum
Gohir.D08G039432 Gossypium hirsutum
Gohir.D08G161400 Gossypium hirsutum
Gohir.D12G101800 Gossypium hirsutum
Gohir.D12G102000 Gossypium hirsutum
Gorai.004G038100 Gossypium raimondii
Gorai.004G038200 Gossypium raimondii
Gorai.004G167700 Gossypium raimondii
Gorai.008G111000 Gossypium raimondii
Gorai.008G111200 Gossypium raimondii
GSVIVG01018330001 Vitis vinifera
GSVIVG01018331001 Vitis vinifera
HanXRQChr12g0383221 Helianthus annuus
HanXRQChr14g0457481 Helianthus annuus
HanXRQChr16g0520961 Helianthus annuus
HanXRQChr17g0562571 Helianthus annuus
Haze_02890 Corylus avellana
Haze_02893 Corylus avellana
Hma1.2p1_1397F.1_g280700 Hydrangea macrophylla
Hma1.2p1_1397F.1_g280720 Hydrangea macrophylla
Hma1.2p1_1672F.1_g296850 Hydrangea macrophylla
Hma1.2p1_2750F.1_g327830 Hydrangea macrophylla
HPP92_020916 Vanilla planifolia
Hund17120 Selenicereus undatus
Hund21144 Selenicereus undatus
Lalb_Chr07g0195211 Lupinus albus
Lalb_Chr12g0210391 Lupinus albus
Lalb_Chr13g0290711 Lupinus albus
Lalb_Chr13g0290721 Lupinus albus
Lj3g0023210 Lotus japonicus
Lj7A551T55 Lonicera japonica
Lj7A551T56 Lonicera japonica
Lj9C551G3 Lonicera japonica
Lsat_1_v5_gn_1_83640 Lactuca sativa
Lsat_1_v5_gn_4_38241 Lactuca sativa
Lsat_1_v5_gn_8_117360 Lactuca sativa
Manes.01G273000 Manihot esculenta
Manes.05G057500 Manihot esculenta
Mapoly0051s0028 Marchantia polymorpha
MCO09G142 Micromonas commoda
MD02G1222000 Malus domestica
MD07G1093700 Malus domestica
MD07G1093900 Malus domestica
MD07G1094000 Malus domestica
MD07G1094100 Malus domestica
MD07G1094200 Malus domestica
MD07G1094300 Malus domestica
MD07G1094400 Malus domestica
Medtr7g451340 Medicago truncatula
Medtr8g007000 Medicago truncatula
Medtr8g008680 Medicago truncatula
MELO3C006274.2 Cucumis melo
MELO3C020378.2 Cucumis melo
MELO3C020380.2 Cucumis melo
Migut.B01497 Erythranthe guttata
Migut.B01498 Erythranthe guttata
MSTRG.28136 Avicennia marina
MSTRG.4951 Avicennia marina
Nitab4.5_0000563g0040 Nicotiana tabacum
Nitab4.5_0001981g0030 Nicotiana tabacum
Nitab4.5_0002559g0020 Nicotiana tabacum
Nitab4.5_0007904g0020 Nicotiana tabacum
Nn1g00722 Nelumbo nucifera
Nn6g33727 Nelumbo nucifera
Oeu012019.1 Olea europaea
Oeu012020.1 Olea europaea
Oeu012021.1 Olea europaea
Oeu018166.1 Olea europaea
Oeu024396.1 Olea europaea
Oeu034852.1 Olea europaea
Oeu034853.1 Olea europaea
Oeu037423.1 Olea europaea
Oeu053918.1 Olea europaea
Os07g0555200 Oryza sativa ssp. japonica
Peaxi162Scf00715g00012 Petunia axillaris
Peaxi162Scf00793g00038 Petunia axillaris
PGR042G0727 Punica granatum
PGR042G2236 Punica granatum
PGSC0003DMG400001722 Solanum tuberosum
PGSC0003DMG400001850 Solanum tuberosum
Phvul.008G139000 Phaseolus vulgaris
Phvul.010G043700 Phaseolus vulgaris
Potri.002G140200 Populus trichocarpa
Potri.014G052600 Populus trichocarpa
Pp3c3_36480 Physcomitrium patens
Pp3c3_37250 Physcomitrium patens
Prupe.2G118700 Prunus persica
Psat0s4221g0120 Pisum sativum
Psat2g084920 Pisum sativum
Psat2g156280 Pisum sativum
Psat3g095360 Pisum sativum
Psat3g153080 Pisum sativum
Psat3g156920 Pisum sativum
Psat4g222320 Pisum sativum
QL04p026533 Quercus lobata
QL04p026546 Quercus lobata
QL04p026948 Quercus lobata
QL04p027147 Quercus lobata
RcHm_v2.0_Chr1g0344441 Rosa chinensis
RcHm_v2.0_Chr1g0344451 Rosa chinensis
RcHm_v2.0_Chr5g0038171 Rosa chinensis
Rhsim01G0142200 Rhododendron simsii
Rhsim07G0038600 Rhododendron simsii
Sabra02G0109500 Salix brachista
Sabra14G0037400 Salix brachista
Sabra14G0039500 Salix brachista
SalBow4G0492 Salvia bowleyana
SalBow5G3615 Salvia bowleyana
Sc02g0003230 Simmondsia chinensis
Sc15g0003100 Simmondsia chinensis
Sc15g0003110 Simmondsia chinensis
Sc21g0006660 Simmondsia chinensis
Sc26g0001740 Simmondsia chinensis
Sed0001487 Sechium edule
Sed0019734 Sechium edule
Sed0024848 Sechium edule
SEGI_00624 Sequoiadendron giganteum
SEGI_13857 Sequoiadendron giganteum
SEGI_19472 Sequoiadendron giganteum
SEGI_22104 Sequoiadendron giganteum
SEGI_23855 Sequoiadendron giganteum
SEGI_24826 Sequoiadendron giganteum
SEGI_26257 Sequoiadendron giganteum
SEGI_28335 Sequoiadendron giganteum
SEGI_29310 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28730 Striga asiatica
SMO174G0106 Selaginella moellendorffii
SMO174G0271 Selaginella moellendorffii
Solyc01g088700.4 Solanum lycopersicum
Solyc08g077700.3 Solanum lycopersicum
Sopen01g035540 Solanum pennellii
Sopen08g026210 Solanum pennellii
Sopen09g028630 Solanum pennellii
Sp5g02980 Schrenkiella parvula
TAR374G0749 Trochodendron aralioides
TAR375G0492 Trochodendron aralioides
TAR375G0669 Trochodendron aralioides
TAR622G1383 Trochodendron aralioides
TAR629G2616 Trochodendron aralioides
TAR636G0995 Trochodendron aralioides
THA.LOC104802505 Tarenaya hassleriana
THA.LOC104817181 Tarenaya hassleriana
Thecc.01G401400 Theobroma cacao
Thhalv10005736m.g Eutrema salsugineum
TPR.G10182 Trifolium pratense
TPR.G20610 Trifolium pratense
TPR.G32119 Trifolium pratense
TPR.G32164 Trifolium pratense
TPR.G32165 Trifolium pratense
TPR.G36339 Trifolium pratense
TWI14G0765 Tripterygium wilfordii
TWI23G1321 Tripterygium wilfordii
TWI59G1236 Tripterygium wilfordii
unitig_22.g6701 Utricularia gibba
unitig_578.g16708 Utricularia gibba
vmacro13528 Vaccinium macrocarpon
vmacro21072 Vaccinium macrocarpon
VMungo0331G1943 Vigna mungo
VMungo1383G2527 Vigna mungo
Zm00001eb106680 Zea mays
Zm00001eb232470 Zea mays
Zm00001eb248000 Zea mays
Zm00001eb323810 Zea mays
Zm00001eb427750 Zea mays

User provided reference genes

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