Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p05110 Brassica napus
A10p09120 Brassica napus
Aa31LG1G26600 Aethionema arabicum
Aa31LG3G7850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4073 Anthoceros agrestis
Actinidia13578 Actinidia chinensis
Actinidia22777 Actinidia chinensis
Actinidia22832 Actinidia chinensis
Ah.07g207740 Amaranthus hybridus
AL4G44110 Arabidopsis lyrata
AL8G25690 Arabidopsis lyrata
Aqoxy5G03844 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.07BPB5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.563PPB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KBN9P5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P77KV0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RS1WPW Arachis hypogaea
AT2G45010 Arabidopsis thaliana
AT5G51400 Arabidopsis thaliana
ATR0317G044 Amborella trichopoda
Atru.chr1.732 Acer truncatum
Atru.chr5.198 Acer truncatum
Atru.chr5.203 Acer truncatum
AUR62002208 Chenopodium quinoa
AUR62004143 Chenopodium quinoa
AUR62013704 Chenopodium quinoa
AUR62015491 Chenopodium quinoa
BcaB05g24007 Brassica carinata
BcaB08g35495 Brassica carinata
BcaC02g12269 Brassica carinata
BcaC03g14609 Brassica carinata
BcaC04g20681 Brassica carinata
BolC2t08184H Brassica oleracea
BolC4t22227H Brassica oleracea
BolC9t56947H Brassica oleracea
BraA02t06301Z Brassica rapa
BraA05t19485Z Brassica rapa
BraA10t42996Z Brassica rapa
C04p05960 Brassica napus
C09p40650 Brassica napus
CAN.G109.2 Capsicum annuum
CAN.G48.27 Capsicum annuum
CAN.G871.4 Capsicum annuum
CANSAT56G2465 Cannabis sativa
CANSAT56G2523 Cannabis sativa
CARHR140270 Cardamine hirsuta
CARHR264120 Cardamine hirsuta
Carub.0004s2761 Capsella rubella
Carub.0008s1143 Capsella rubella
Ca_14074_v3 Cicer arietinum L.
Ca_19641_v3 Cicer arietinum L.
Ca_26284_v3 Cicer arietinum L.
CBR_g19739 Chara braunii
CBR_g38081 Chara braunii
CBR_g55377 Chara braunii
Cc02_g04320 Coffea canephora
Cc02_g24470 Coffea canephora
Cc02_g28070 Coffea canephora
CDE02G0116 Ceratophyllum demersum
CDE04G3765 Ceratophyllum demersum
Cfa000715 Carpinus fangiana
Cfa008163 Carpinus fangiana
Ciclev10005768m.g Citrus clementina
Ciclev10021961m.g Citrus clementina
CiPaw.04G059700 Carya illinoinensis
CiPaw.13G030100 Carya illinoinensis
CiPaw.14G023900 Carya illinoinensis
ClCG05G007350 Citrullus lanatus
ClCG06G002950 Citrullus lanatus
COL.COLO4_14119 Corchorus olitorius
Cpa.g.sc218.4 Carica papaya
Cpa.g.sc3.326 Carica papaya
Cre16.g695700 Chlamydomonas reinhardtii
CsaV3_3G016120 Cucumis sativus L.
CsaV3_6G009070 Cucumis sativus L.
CSS0018990 Camellia sinensis var. sinensis
CSS0022775 Camellia sinensis var. sinensis
DCAR_009444 Daucus carota
DCAR_020188 Daucus carota
DCAR_031880 Daucus carota
Dinv06558 Davidia involucrata
Dinv06559 Davidia involucrata
Dinv28579 Davidia involucrata
Dinv44100 Davidia involucrata
Duzib084G0696 Durio zibethinus
Duzib133G0077 Durio zibethinus
Duzib205G1309 Durio zibethinus
ECA232G0846 Erigeron canadensis
ECA232G2236 Erigeron canadensis
ECA232G5023 Erigeron canadensis
ECA240G0336 Erigeron canadensis
EL10Ac1g00812 Beta vulgaris
EL10Ac3g05627 Beta vulgaris
EL10Ac3g05848 Beta vulgaris
Eucgr.B01433 Eucalyptus grandis
Eucgr.B01629 Eucalyptus grandis
Eucgr.D02510 Eucalyptus grandis
Eucgr.K00005 Eucalyptus grandis
Eucgr.K00163 Eucalyptus grandis
Eucgr.L02289 Eucalyptus grandis
FAN01G2086 Fragaria x ananassa
FAN01G3154 Fragaria x ananassa
FAN03G0597 Fragaria x ananassa
FAN03G2690 Fragaria x ananassa
FAN06G0747 Fragaria x ananassa
FAN06G1038 Fragaria x ananassa
FAN06G2485 Fragaria x ananassa
FAN06G3974 Fragaria x ananassa
FAN10G1028 Fragaria x ananassa
FAN10G1277 Fragaria x ananassa
FAN10G3864 Fragaria x ananassa
FvH4_7g10490 Fragaria vesca
FvH4_7g27460 Fragaria vesca
Glyma.04G120600 Glycine max
Glyma.06G317900 Glycine max
Glyma.09G224300 Glycine max
Glyma.12G012700 Glycine max
Gohir.A03G059200 Gossypium hirsutum
Gohir.A08G030050 Gossypium hirsutum
Gohir.A11G077400 Gossypium hirsutum
Gohir.D03G106900 Gossypium hirsutum
Gohir.D08G040900 Gossypium hirsutum
Gohir.D11G081800 Gossypium hirsutum
Gorai.003G113300 Gossypium raimondii
Gorai.004G039800 Gossypium raimondii
Gorai.007G087500 Gossypium raimondii
GSVIVG01018185001 Vitis vinifera
GSVIVG01018665001 Vitis vinifera
HanXRQChr13g0422781 Helianthus annuus
HanXRQChr15g0485971 Helianthus annuus
HanXRQChr15g0485991 Helianthus annuus
HanXRQChr16g0512791 Helianthus annuus
Haze_02738 Corylus avellana
Haze_13881 Corylus avellana
Hma1.2p1_0405F.1_g145640 Hydrangea macrophylla
Hma1.2p1_0432F.1_g151780 Hydrangea macrophylla
Hund11826 Selenicereus undatus
Hund27390 Selenicereus undatus
Lalb_Chr01g0000661 Lupinus albus
Lalb_Chr03g0040001 Lupinus albus
Lalb_Chr15g0079711 Lupinus albus
Lalb_Chr16g0376681 Lupinus albus
Lalb_Chr19g0140151 Lupinus albus
Lj1A979T83 Lonicera japonica
Lj1g0005072 Lotus japonicus
Lj3g0005289 Lotus japonicus
Lj3g0025314 Lotus japonicus
Lj8C43G5 Lonicera japonica
Lj9C160T0 Lonicera japonica
Lsat_1_v5_gn_2_128620 Lactuca sativa
Lsat_1_v5_gn_3_129601 Lactuca sativa
Lsat_1_v5_gn_8_87801 Lactuca sativa
Lsat_1_v5_gn_9_52021 Lactuca sativa
Manes.01G271000 Manihot esculenta
Manes.05G051300 Manihot esculenta
Manes.14G036200 Manihot esculenta
Mapoly0024s0111 Marchantia polymorpha
MBI04_g09521_MAGBIO Magnolia biondii
MD01G1063800 Malus domestica
MD01G1182500 Malus domestica
MD03G1114000 Malus domestica
MD07G1110500 Malus domestica
MD07G1110900 Malus domestica
MD07G1253100 Malus domestica
MD07G1253200 Malus domestica
MD11G1237200 Malus domestica
MD13G1258300 Malus domestica
MD15G1303400 Malus domestica
Medtr0172s0050 Medicago truncatula
Medtr3g408350 Medicago truncatula
Medtr5g065810 Medicago truncatula
Medtr7g044840 Medicago truncatula
MELO3C006809.2 Cucumis melo
MELO3C022235.2 Cucumis melo
Migut.F00480 Erythranthe guttata
Migut.F01186 Erythranthe guttata
Migut.N01760 Erythranthe guttata
MSTRG.8410 Avicennia marina
MSTRG.8851 Avicennia marina
Nitab4.5_0000210g0130 Nicotiana tabacum
Nitab4.5_0000818g0210 Nicotiana tabacum
Nitab4.5_0002816g0080 Nicotiana tabacum
Nitab4.5_0003428g0030 Nicotiana tabacum
Nitab4.5_0003647g0010 Nicotiana tabacum
Nitab4.5_0004921g0040 Nicotiana tabacum
Nn1g00951 Nelumbo nucifera
Nn6g33907 Nelumbo nucifera
Oeu017789.1 Olea europaea
Oeu042558.2 Olea europaea
Oeu052990.1 Olea europaea
Oeu063216.1 Olea europaea
Os03g0101800 Oryza sativa ssp. japonica
Os10g0560200 Oryza sativa ssp. japonica
Peaxi162Scf00001g00569 Petunia axillaris
Peaxi162Scf00167g00514 Petunia axillaris
Peaxi162Scf00241g00117 Petunia axillaris
PGR004G0282 Punica granatum
PGR142G3298 Punica granatum
PGSC0003DMG400014815 Solanum tuberosum
PGSC0003DMG400017708 Solanum tuberosum
PGSC0003DMG400030101 Solanum tuberosum
Phvul.005G008700 Phaseolus vulgaris
Phvul.011G015600 Phaseolus vulgaris
Potri.001G124500 Populus trichocarpa
Potri.002G141600 Populus trichocarpa
Potri.003G108800 Populus trichocarpa
Pp3c13_15180 Physcomitrium patens
Pp3c13_15290 Physcomitrium patens
Pp3c13_21270 Physcomitrium patens
Pp3c13_21280 Physcomitrium patens
Pp3c17_4810 Physcomitrium patens
Pp3c2_14810 Physcomitrium patens
Prupe.2G134400 Prunus persica
Prupe.2G276700 Prunus persica
Psat3g158040 Pisum sativum
Psat5g228360 Pisum sativum
Psat7g156440 Pisum sativum
PSO541G3969 Papaver somniferum
PSO675G8589 Papaver somniferum
QL04p035318 Quercus lobata
QL09p005715 Quercus lobata
RcHm_v2.0_Chr1g0348281 Rosa chinensis
RcHm_v2.0_Chr1g0374251 Rosa chinensis
Rhsim01G0136200 Rhododendron simsii
Rhsim04G0175500 Rhododendron simsii
Rhsim09G0191200 Rhododendron simsii
Sabra01G0096000 Salix brachista
Sabra03G0075400 Salix brachista
SalBow2G1102 Salvia bowleyana
SalBow5G3851 Salvia bowleyana
Sc02g0002890 Simmondsia chinensis
Sc25g0000050 Simmondsia chinensis
Sc26g0001360 Simmondsia chinensis
Sed0012453 Sechium edule
Sed0016302 Sechium edule
Sed0020292 Sechium edule
SEGI_02261 Sequoiadendron giganteum
SEGI_02682 Sequoiadendron giganteum
SEGI_04663 Sequoiadendron giganteum
SGA_v2.0_scaffold153G36944 Striga asiatica
SGA_v2.0_scaffold2G01214 Striga asiatica
SGA_v2.0_scaffold44G16548 Striga asiatica
SGA_v2.0_scaffold52G19200 Striga asiatica
SHI13590 Sapria himalayana
SMO339G0008 Selaginella moellendorffii
SMO364G0805 Selaginella moellendorffii
Solyc03g093200.3 Solanum lycopersicum
Solyc05g051690.3 Solanum lycopersicum
Solyc10g018920.2 Solanum lycopersicum
Sopen03g024000 Solanum pennellii
Sopen05g030160 Solanum pennellii
Sopen10g008830 Solanum pennellii
Sp4g27080 Schrenkiella parvula
Sp6g13560 Schrenkiella parvula
TAR629G1801 Trochodendron aralioides
TAR636G2814 Trochodendron aralioides
THA.LOC104802479 Tarenaya hassleriana
THA.LOC104811524 Tarenaya hassleriana
THA.LOC104825059 Tarenaya hassleriana
Thecc.01G387200 Theobroma cacao
Thecc.03G155300 Theobroma cacao
Thhalv10001602m.g Eutrema salsugineum
Thhalv10014540m.g Eutrema salsugineum
TPR.G12211 Trifolium pratense
TPR.G20253 Trifolium pratense
TPR.G39120 Trifolium pratense
TWI14G0249 Tripterygium wilfordii
TWI23G0870 Tripterygium wilfordii
TWI23G0992 Tripterygium wilfordii
TWI39G1112 Tripterygium wilfordii
TWI59G0247 Tripterygium wilfordii
unitig_22.g6798 Utricularia gibba
unitig_578.g16621 Utricularia gibba
unitig_85.g27172 Utricularia gibba
vmacro09911 Vaccinium macrocarpon
vmacro21044 Vaccinium macrocarpon
VMungo0540G1457 Vigna mungo
VMungo1080G1852 Vigna mungo
Zm00001eb404500 Zea mays

User provided reference genes

Program Settings