Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia02773 Actinidia chinensis
Actinidia35147 Actinidia chinensis
Actinidia35149 Actinidia chinensis
Ah.09g231660 Amaranthus hybridus
Aqoxy2G00892 Aquilegia oxysepala
Aqoxy2G02259 Aquilegia oxysepala
Aqoxy3G00361 Aquilegia oxysepala
Aqoxy3G00375 Aquilegia oxysepala
Aqoxy3G00376 Aquilegia oxysepala
Aqoxy3G00738 Aquilegia oxysepala
Aqoxy3G00828 Aquilegia oxysepala
Aqoxy3G01316 Aquilegia oxysepala
Aqoxy4G01072 Aquilegia oxysepala
Aqoxy4G02081 Aquilegia oxysepala
Aqoxy4G02350 Aquilegia oxysepala
Aqoxy59s001 Aquilegia oxysepala
Aqoxy5G00659 Aquilegia oxysepala
Aqoxy5G00664 Aquilegia oxysepala
Aqoxy5G00669 Aquilegia oxysepala
Aqoxy6G01076 Aquilegia oxysepala
Aqoxy7G01172 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6LG1IJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D2CQLD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TS9750 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XHBX5X Arachis hypogaea
Atru.chr3.556 Acer truncatum
Atru.chr3.557 Acer truncatum
Atru.chr3.562 Acer truncatum
Atru.chr9.129 Acer truncatum
AUR62003166 Chenopodium quinoa
AUR62003167 Chenopodium quinoa
AUR62033031 Chenopodium quinoa
AUR62033032 Chenopodium quinoa
AUR62040762 Chenopodium quinoa
CAN.G134.121 Capsicum annuum
CAN.G134.123 Capsicum annuum
CAN.G358.108 Capsicum annuum
CAN.G358.109 Capsicum annuum
CAN.G53.20 Capsicum annuum
CAN.G929.25 Capsicum annuum
CANSAT01G0107 Cannabis sativa
CANSAT01G0893 Cannabis sativa
Ca_22427_v3 Cicer arietinum L.
Ca_28035_v3 Cicer arietinum L.
Cc04_g08540 Coffea canephora
Cc07_g09370 Coffea canephora
Cfa004296 Carpinus fangiana
Cfa011278 Carpinus fangiana
Ciclev10020526m.g Citrus clementina
Ciclev10025746m.g Citrus clementina
Ciclev10025934m.g Citrus clementina
CiPaw.01G036200 Carya illinoinensis
CiPaw.01G036300 Carya illinoinensis
ClCG07G009080 Citrullus lanatus
COL.COLO4_11599 Corchorus olitorius
COL.COLO4_19852 Corchorus olitorius
COL.COLO4_22097 Corchorus olitorius
COL.COLO4_22098 Corchorus olitorius
COL.COLO4_27501 Corchorus olitorius
Cpa.g.sc42.22 Carica papaya
Cpa.g.sc544.2 Carica papaya
CsaV3_1G024340 Cucumis sativus L.
CsaV3_1G028850 Cucumis sativus L.
CsaV3_4G005120 Cucumis sativus L.
CSS0028398 Camellia sinensis var. sinensis
CSS0029544 Camellia sinensis var. sinensis
CSS0031967 Camellia sinensis var. sinensis
CSS0039427 Camellia sinensis var. sinensis
CSS0047153 Camellia sinensis var. sinensis
DCAR_014748 Daucus carota
DCAR_015582 Daucus carota
DCAR_015611 Daucus carota
DCAR_015928 Daucus carota
DCAR_021443 Daucus carota
Dinv26823 Davidia involucrata
Dinv39969 Davidia involucrata
Dinv40101 Davidia involucrata
Duzib147G0480 Durio zibethinus
Duzib147G0753 Durio zibethinus
Duzib168G0815 Durio zibethinus
Duzib187G1349 Durio zibethinus
ECA238G1939 Erigeron canadensis
EL10Ac2g03769 Beta vulgaris
EL10Ac2g03773 Beta vulgaris
EL10Ac6g14933 Beta vulgaris
EL10Ac6g14935 Beta vulgaris
EL10Ac8g18839 Beta vulgaris
Eucgr.I02456 Eucalyptus grandis
FAN19G0041 Fragaria x ananassa
FAN19G1318 Fragaria x ananassa
FAN19G1320 Fragaria x ananassa
FAN23G1316 Fragaria x ananassa
FAN23G1330 Fragaria x ananassa
FAN23G2135 Fragaria x ananassa
FAN26G2215 Fragaria x ananassa
FAN28G0805 Fragaria x ananassa
FAN28G1267 Fragaria x ananassa
FAN28G1844 Fragaria x ananassa
FAN28G2838 Fragaria x ananassa
FvH4_1g13470 Fragaria vesca
FvH4_1g13480 Fragaria vesca
FvH4_1g13490 Fragaria vesca
Glyma.01G083900 Glycine max
Glyma.08G259900 Glycine max
Gohir.A11G185000 Gossypium hirsutum
Gohir.A11G185100 Gossypium hirsutum
Gohir.A12G065150 Gossypium hirsutum
Gohir.D11G191500 Gossypium hirsutum
Gohir.D11G191566 Gossypium hirsutum
Gohir.D12G065250 Gossypium hirsutum
Gorai.007G204100 Gossypium raimondii
Gorai.007G204200 Gossypium raimondii
Gorai.008G068500 Gossypium raimondii
GSVIVG01018983001 Vitis vinifera
GSVIVG01026445001 Vitis vinifera
HanXRQChr02g0054011 Helianthus annuus
HanXRQChr14g0441221 Helianthus annuus
Haze_15106 Corylus avellana
Hma1.2p1_0400F.1_g144530 Hydrangea macrophylla
Hma1.2p1_0400F.1_g144540 Hydrangea macrophylla
Hma1.2p1_0739F.1_g211360 Hydrangea macrophylla
HPP92_007728 Vanilla planifolia
Hund16586 Selenicereus undatus
Lalb_Chr05g0225771 Lupinus albus
Lalb_Chr16g0386521 Lupinus albus
Lj2g0005175 Lotus japonicus
Lj2P450T13 Lonicera japonica
Lj4C199T6 Lonicera japonica
Lj4g0009025 Lotus japonicus
Lsat_1_v5_gn_2_76641 Lactuca sativa
Lsat_1_v5_gn_4_150760 Lactuca sativa
Lsat_1_v5_gn_4_183980 Lactuca sativa
Manes.01G134100 Manihot esculenta
Manes.02G092400 Manihot esculenta
Manes.05G199200 Manihot esculenta
Manes.18G080500 Manihot esculenta
Manes.18G080566 Manihot esculenta
Manes.18G080632 Manihot esculenta
Manes.18G080700 Manihot esculenta
Manes.18G080800 Manihot esculenta
Manes.18G080900 Manihot esculenta
MD02G1150100 Malus domestica
MD02G1150200 Malus domestica
MD02G1150300 Malus domestica
MD15G1264600 Malus domestica
MD15G1264700 Malus domestica
MD15G1264800 Malus domestica
Medtr4g134390 Medicago truncatula
MELO3C010232.2 Cucumis melo
MELO3C017556.2 Cucumis melo
Migut.H02492 Erythranthe guttata
Migut.M00586 Erythranthe guttata
Migut.O00261 Erythranthe guttata
Migut.O00341 Erythranthe guttata
MSTRG.3832 Avicennia marina
Nitab4.5_0000136g0430 Nicotiana tabacum
Nitab4.5_0000434g0020 Nicotiana tabacum
Nitab4.5_0000434g0050 Nicotiana tabacum
Nitab4.5_0000782g0110 Nicotiana tabacum
Nitab4.5_0001827g0040 Nicotiana tabacum
Nitab4.5_0001827g0080 Nicotiana tabacum
Nitab4.5_0003233g0040 Nicotiana tabacum
Nn4g25094 Nelumbo nucifera
Oeu007441.1 Olea europaea
Oeu024879.1 Olea europaea
Oeu038400.1 Olea europaea
Oeu054758.1 Olea europaea
Peaxi162Scf00008g00373 Petunia axillaris
Peaxi162Scf00171g00214 Petunia axillaris
Peaxi162Scf00515g00043 Petunia axillaris
Peaxi162Scf00564g00016 Petunia axillaris
Peaxi162Scf00984g00258 Petunia axillaris
PGSC0003DMG400010178 Solanum tuberosum
PGSC0003DMG400014891 Solanum tuberosum
PGSC0003DMG400014906 Solanum tuberosum
PGSC0003DMG400015473 Solanum tuberosum
PGSC0003DMG400019443 Solanum tuberosum
PGSC0003DMG400019444 Solanum tuberosum
PGSC0003DMG400032474 Solanum tuberosum
PGSC0003DMG400041367 Solanum tuberosum
PGSC0003DMG401019442 Solanum tuberosum
PGSC0003DMG402019442 Solanum tuberosum
Phvul.002G082800 Phaseolus vulgaris
Potri.005G124500 Populus trichocarpa
Potri.007G027200 Populus trichocarpa
Potri.007G027300 Populus trichocarpa
Potri.015G028500 Populus trichocarpa
Prupe.7G152800 Prunus persica
Prupe.7G152900 Prunus persica
Prupe.7G153000 Prunus persica
Psat4g001840 Pisum sativum
PSO063G5348 Papaver somniferum
PSO782G2286 Papaver somniferum
QL04p012624 Quercus lobata
QL04p012646 Quercus lobata
QL04p012655 Quercus lobata
QL04p012671 Quercus lobata
QL04p012695 Quercus lobata
QL04p012713 Quercus lobata
QL04p012747 Quercus lobata
QL04p012751 Quercus lobata
QL04p013429 Quercus lobata
QL04p013477 Quercus lobata
QL04p013493 Quercus lobata
QL04p013515 Quercus lobata
QL04p013526 Quercus lobata
QL04p013554 Quercus lobata
QL04p019597 Quercus lobata
QL04p019734 Quercus lobata
QL04p019991 Quercus lobata
QL04p020224 Quercus lobata
QL04p020508 Quercus lobata
QL04p020660 Quercus lobata
QL05p077107 Quercus lobata
QL05p088620 Quercus lobata
QL06p045688 Quercus lobata
QL06p045710 Quercus lobata
QL08p051526 Quercus lobata
QL08p054586 Quercus lobata
QL08p054647 Quercus lobata
QL08p054650 Quercus lobata
QL08p055137 Quercus lobata
QL08p055477 Quercus lobata
QL93p0073_1187 Quercus lobata
RcHm_v2.0_Chr2g0101851 Rosa chinensis
RcHm_v2.0_Chr2g0101871 Rosa chinensis
RcHm_v2.0_Chr2g0101881 Rosa chinensis
Rhsim08G0114200 Rhododendron simsii
Rhsim10G0188800 Rhododendron simsii
Sabra05G0102300 Salix brachista
Sabra07G0023700 Salix brachista
Sabra07G0023800 Salix brachista
Sabra14G0057400 Salix brachista
Sabra15G0023700 Salix brachista
SalBow5G1081 Salvia bowleyana
SalBow8G3676 Salvia bowleyana
Sed0001582 Sechium edule
Sed0018683 Sechium edule
SGA_v2.0_scaffold34G13656 Striga asiatica
SGA_v2.0_scaffold47G17662 Striga asiatica
SGA_v2.0_scaffold90G27757 Striga asiatica
Solyc01g097610.3 Solanum lycopersicum
Solyc01g097620.2 Solanum lycopersicum
Solyc01g097630.3 Solanum lycopersicum
Solyc02g062800.2 Solanum lycopersicum
Solyc02g085440.4 Solanum lycopersicum
Solyc02g085450.1 Solanum lycopersicum
Solyc03g098570.1 Solanum lycopersicum
Solyc04g056525.1 Solanum lycopersicum
Solyc04g150155.1 Solanum lycopersicum
Solyc05g049910.3 Solanum lycopersicum
Solyc05g049930.1 Solanum lycopersicum
Sopen00g008500 Solanum pennellii
Sopen01g040930 Solanum pennellii
Sopen01g041240 Solanum pennellii
Sopen02g013840 Solanum pennellii
Sopen02g030120 Solanum pennellii
Sopen02g030130 Solanum pennellii
Sopen03g029280 Solanum pennellii
Sopen04g025450 Solanum pennellii
Sopen05g028260 Solanum pennellii
Sopen05g028290 Solanum pennellii
TAR371G0475 Trochodendron aralioides
TAR371G0827 Trochodendron aralioides
TAR376G1077 Trochodendron aralioides
TAR628G0483 Trochodendron aralioides
TAR629G0425 Trochodendron aralioides
TAR629G1428 Trochodendron aralioides
TAR633G0319 Trochodendron aralioides
Thecc.01G037600 Theobroma cacao
Thecc.01G037700 Theobroma cacao
Thecc.02G356700 Theobroma cacao
Thecc.09G282200 Theobroma cacao
TPR.G18684 Trifolium pratense
TPR.G20855 Trifolium pratense
TPR.G5959 Trifolium pratense
TWI09G0807 Tripterygium wilfordii
unitig_899.g14987 Utricularia gibba
vmacro17847 Vaccinium macrocarpon
vmacro20419 Vaccinium macrocarpon

User provided reference genes

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