Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p34820 Brassica napus
A06p00950 Brassica napus
A08p31160 Brassica napus
A09p36550 Brassica napus
A09p60620 Brassica napus
Aa31LG7G1900 Aethionema arabicum
Aa31LG8G1810 Aethionema arabicum
Aa31LG8G1820 Aethionema arabicum
Aa31LG8G1840 Aethionema arabicum
Aa31LG8G1850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.795 Anthoceros agrestis
Actinidia07688 Actinidia chinensis
Actinidia12619 Actinidia chinensis
Actinidia39566 Actinidia chinensis
AL1G29250 Arabidopsis lyrata
AL1G43850 Arabidopsis lyrata
AL1G62150 Arabidopsis lyrata
AL3G26930 Arabidopsis lyrata
Aqoxy1G01728 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A6U3UR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F69C65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MAU5T0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U280DN Arachis hypogaea
AT1G17080 Arabidopsis thaliana
AT1G53560 Arabidopsis thaliana
AT3G14595 Arabidopsis thaliana
ATR0693G411 Amborella trichopoda
Atru.chr10.1245 Acer truncatum
Atru.chr10.1268 Acer truncatum
AUR62019701 Chenopodium quinoa
AUR62027519 Chenopodium quinoa
AUR62030213 Chenopodium quinoa
AUR62030214 Chenopodium quinoa
BcaB03g13019 Brassica carinata
BcaB04g18854 Brassica carinata
BcaB06g25371 Brassica carinata
BcaB07g32596 Brassica carinata
BcaB07g33321 Brassica carinata
BcaC01g03924 Brassica carinata
BcaC05g27007 Brassica carinata
BcaC05g29055 Brassica carinata
BcaC07g38829 Brassica carinata
BcaC07g41395 Brassica carinata
BcaC07g41443 Brassica carinata
BolC3t16972H Brassica oleracea
BolC5t31590H Brassica oleracea
BolC5t33946H Brassica oleracea
BolC8t49395H Brassica oleracea
BolC8t51956H Brassica oleracea
BraA03t13039Z Brassica rapa
BraA06t23322Z Brassica rapa
BraA08t35040Z Brassica rapa
BraA09t39176Z Brassica rapa
BraA09t41432Z Brassica rapa
C05p28710 Brassica napus
C08p17690 Brassica napus
C08p44080 Brassica napus
CAN.G103.1 Capsicum annuum
CAN.G1320.3 Capsicum annuum
CAN.G375.72 Capsicum annuum
CAN.G375.73 Capsicum annuum
CAN.G650.14 Capsicum annuum
CANSAT56G3423 Cannabis sativa
CARHR017610 Cardamine hirsuta
CARHR029420 Cardamine hirsuta
CARHR043810 Cardamine hirsuta
CARHR089560 Cardamine hirsuta
CARHR089570 Cardamine hirsuta
Carub.0001s1680 Capsella rubella
Carub.0001s2822 Capsella rubella
Carub.0001s4277 Capsella rubella
Carub.0003s1430 Capsella rubella
Ca_03406_v3 Cicer arietinum L.
Cc05_g10470 Coffea canephora
Cc09_g09260 Coffea canephora
CDE02G3107 Ceratophyllum demersum
CDE08G1240 Ceratophyllum demersum
Ciclev10017045m.g Citrus clementina
Ciclev10022163m.g Citrus clementina
CiPaw.09G125200 Carya illinoinensis
CiPaw.11G067700 Carya illinoinensis
CiPaw.12G046500 Carya illinoinensis
ClCG03G007100 Citrullus lanatus
COL.COLO4_17438 Corchorus olitorius
COL.COLO4_31092 Corchorus olitorius
Cpa.g.sc166.20 Carica papaya
CsaV3_1G032680 Cucumis sativus L.
CsaV3_4G032660 Cucumis sativus L.
CSS0021549 Camellia sinensis var. sinensis
CSS0029184 Camellia sinensis var. sinensis
DCAR_013784 Daucus carota
DCAR_017574 Daucus carota
DCAR_027927 Daucus carota
Dinv13330 Davidia involucrata
Dinv26683 Davidia involucrata
Dinv30730 Davidia involucrata
Duzib187G0961 Durio zibethinus
Duzib213G0886 Durio zibethinus
ECA234G1079 Erigeron canadensis
ECA236G2480 Erigeron canadensis
ECA236G2816 Erigeron canadensis
EL10Ac4g08462 Beta vulgaris
EL10Ac8g19734 Beta vulgaris
Eucgr.D00303 Eucalyptus grandis
Eucgr.F01391 Eucalyptus grandis
Eucgr.F01397 Eucalyptus grandis
Eucgr.F03217 Eucalyptus grandis
Eucgr.L01847 Eucalyptus grandis
Eucgr.L03206 Eucalyptus grandis
FAN11G2086 Fragaria x ananassa
FAN16G0505 Fragaria x ananassa
FAN16G2234 Fragaria x ananassa
FAN21G3180 Fragaria x ananassa
FAN25G0051 Fragaria x ananassa
FAN25G1879 Fragaria x ananassa
FvH4_3g05751 Fragaria vesca
FvH4_3g17030 Fragaria vesca
Glyma.13G261500 Glycine max
Glyma.15G095200 Glycine max
Glyma.15G245400 Glycine max
Gohir.A01G044200 Gossypium hirsutum
Gohir.A06G197200 Gossypium hirsutum
Gohir.A13G151500 Gossypium hirsutum
Gohir.D01G035001 Gossypium hirsutum
Gohir.D06G204700 Gossypium hirsutum
Gohir.D13G155900 Gossypium hirsutum
Gorai.010G238800 Gossypium raimondii
Gorai.013G176500 Gossypium raimondii
GSVIVG01000482001 Vitis vinifera
GSVIVG01021434001 Vitis vinifera
HanXRQChr10g0305661 Helianthus annuus
HanXRQChr12g0373341 Helianthus annuus
HanXRQChr14g0427011 Helianthus annuus
HanXRQChr15g0480101 Helianthus annuus
HanXRQChr15g0495291 Helianthus annuus
Haze_05581 Corylus avellana
Haze_08471 Corylus avellana
Haze_08473 Corylus avellana
Hma1.2p1_0280F.1_g112820 Hydrangea macrophylla
HPP92_021642 Vanilla planifolia
HPP92_024161 Vanilla planifolia
HPP92_024180 Vanilla planifolia
Hund10371 Selenicereus undatus
Hund21528 Selenicereus undatus
Lalb_Chr18g0055571 Lupinus albus
Lalb_Chr20g0109031 Lupinus albus
Lalb_Chr25g0285501 Lupinus albus
Lj1A1186G53 Lonicera japonica
Lj1A815G22 Lonicera japonica
Lj1A819T31 Lonicera japonica
Lj3g0003120 Lotus japonicus
Lj6g0016612 Lotus japonicus
Lj8A144G65 Lonicera japonica
Lsat_1_v5_gn_5_126080 Lactuca sativa
Lsat_1_v5_gn_5_126100 Lactuca sativa
Lsat_1_v5_gn_7_100521 Lactuca sativa
Lsat_1_v5_gn_7_30160 Lactuca sativa
Manes.03G083700 Manihot esculenta
Manes.09G101200 Manihot esculenta
Manes.15G120601 Manihot esculenta
Manes.17G069032 Manihot esculenta
Mapoly0121s0045 Marchantia polymorpha
MBI07_g15276_MAGBIO Magnolia biondii
MBI07_g15286_MAGBIO Magnolia biondii
MBI07_g21774_MAGBIO Magnolia biondii
MBI07_g26369_MAGBIO Magnolia biondii
MD00G1185700 Malus domestica
MD03G1254000 Malus domestica
MD05G1285200 Malus domestica
MD10G1263400 Malus domestica
MD11G1275700 Malus domestica
Medtr2g072210 Medicago truncatula
MELO3C002714.2 Cucumis melo
MELO3C016688.2 Cucumis melo
Migut.M00672 Erythranthe guttata
Migut.M00921 Erythranthe guttata
MSTRG.16233 Avicennia marina
MSTRG.6702 Avicennia marina
Nitab4.5_0000639g0050 Nicotiana tabacum
Nitab4.5_0001655g0020 Nicotiana tabacum
Nitab4.5_0005219g0090 Nicotiana tabacum
Nitab4.5_0005492g0040 Nicotiana tabacum
Nitab4.5_0005492g0070 Nicotiana tabacum
Nitab4.5_0006409g0050 Nicotiana tabacum
Nitab4.5_0009792g0020 Nicotiana tabacum
Nn3g20713 Nelumbo nucifera
Nn4g26536 Nelumbo nucifera
Oeu030919.1 Olea europaea
Oeu031253.1 Olea europaea
Oeu058439.1 Olea europaea
Os01g0667100 Oryza sativa ssp. japonica
Os05g0564800 Oryza sativa ssp. japonica
Os06g0359400 Oryza sativa ssp. japonica
Peaxi162Scf00000g05114 Petunia axillaris
Peaxi162Scf00111g01139 Petunia axillaris
PGR031G2853 Punica granatum
PGR083G1715 Punica granatum
PGSC0003DMG400007054 Solanum tuberosum
PGSC0003DMG400008284 Solanum tuberosum
PGSC0003DMG400008563 Solanum tuberosum
Phvul.005G062800 Phaseolus vulgaris
Phvul.006G163700 Phaseolus vulgaris
Potri.001G380200 Populus trichocarpa
Pp3c12_16590 Physcomitrium patens
Pp3c18_21040 Physcomitrium patens
Pp3c8_2410 Physcomitrium patens
Prupe.4G079300 Prunus persica
Prupe.4G152400 Prunus persica
Psat1g008960 Pisum sativum
PSO541G5631 Papaver somniferum
PSO541G6284 Papaver somniferum
PSO675G4668 Papaver somniferum
QL04p069087 Quercus lobata
QL05p058764 Quercus lobata
RcHm_v2.0_Chr2g0090401 Rosa chinensis
RcHm_v2.0_Chr2g0122421 Rosa chinensis
RcHm_v2.0_Chr5g0013801 Rosa chinensis
RcHm_v2.0_Chr5g0028371 Rosa chinensis
RcHm_v2.0_Chr5g0032921 Rosa chinensis
Rhsim06G0186600 Rhododendron simsii
Rhsim06G0186700 Rhododendron simsii
Rhsim06G0186800 Rhododendron simsii
Rhsim06G0186900 Rhododendron simsii
Rhsim06G0187000 Rhododendron simsii
Rhsim06G0187100 Rhododendron simsii
Sabra11G0084100 Salix brachista
Sabra11G0085300 Salix brachista
Sabra16G0250500 Salix brachista
SalBow7G0288 Salvia bowleyana
SalBow8G1671 Salvia bowleyana
SalBow8G5230 Salvia bowleyana
Sc03g0010870 Simmondsia chinensis
Sed0001461 Sechium edule
Sed0007673 Sechium edule
Sed0012470 Sechium edule
Sed0013043 Sechium edule
SEGI_05637 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39770 Striga asiatica
SGA_v2.0_scaffold1G00160 Striga asiatica
SGA_v2.0_scaffold73G24368 Striga asiatica
SHI27673 Sapria himalayana
SMO116G0090 Selaginella moellendorffii
Solyc02g070630.3 Solanum lycopersicum
Solyc03g013297.1 Solanum lycopersicum
Solyc07g061970.3 Solanum lycopersicum
Solyc08g016190.4 Solanum lycopersicum
Solyc12g011440.2 Solanum lycopersicum
Sopen02g019710 Solanum pennellii
Sopen07g030240 Solanum pennellii
Sopen12g006790 Solanum pennellii
Sp1g15200 Schrenkiella parvula
Sp1g25850 Schrenkiella parvula
Sp1g40070 Schrenkiella parvula
Sp3g12865 Schrenkiella parvula
TAR624G0484 Trochodendron aralioides
TAR626G0118 Trochodendron aralioides
TAR627G0236 Trochodendron aralioides
THA.LOC104812294 Tarenaya hassleriana
THA.LOC104822593 Tarenaya hassleriana
Thecc.06G152100 Theobroma cacao
Thecc.07G141700 Theobroma cacao
Thhalv10008982m.g Eutrema salsugineum
Thhalv10011841m.g Eutrema salsugineum
Thhalv10021729m.g Eutrema salsugineum
TPR.G6847 Trifolium pratense
TWI39G1233 Tripterygium wilfordii
unitig_26.g10107 Utricularia gibba
unitig_746.g26692 Utricularia gibba
vmacro09422 Vaccinium macrocarpon
vmacro11013 Vaccinium macrocarpon
vmacro12000 Vaccinium macrocarpon
vmacro12001 Vaccinium macrocarpon
VMungo0540G1145 Vigna mungo
VMungo0720G2263 Vigna mungo
VMungo1080G0252 Vigna mungo
Zm00001eb122360 Zea mays
Zm00001eb278230 Zea mays
Zm00001eb295940 Zea mays
Zm00001eb343820 Zea mays
Zm00001eb359800 Zea mays

User provided reference genes

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