Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p30290 Brassica napus
A06p21260 Brassica napus
Aa31LG4G14980 Aethionema arabicum
Aa31LG5G19900 Aethionema arabicum
Aa31LG5G19910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1885 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2729 Anthoceros agrestis
Actinidia02921 Actinidia chinensis
Actinidia16512 Actinidia chinensis
Actinidia33955 Actinidia chinensis
Actinidia33956 Actinidia chinensis
Ah.10g037050 Amaranthus hybridus
Ah.16g102630 Amaranthus hybridus
Ah.16g104700 Amaranthus hybridus
AL4G37210 Arabidopsis lyrata
AL5G24390 Arabidopsis lyrata
AL5G24420 Arabidopsis lyrata
AL5G24430 Arabidopsis lyrata
Aqoxy1G00847 Aquilegia oxysepala
Aqoxy1G01406 Aquilegia oxysepala
Aqoxy2G02338 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.73T74K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8S2BPT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AGZ93U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CIGQ09 Arachis hypogaea
AT2G39740 Arabidopsis thaliana
AT3G45750 Arabidopsis thaliana
AT3G45760 Arabidopsis thaliana
ATR0559G259 Amborella trichopoda
ATR0763G181 Amborella trichopoda
Atru.chr12.362 Acer truncatum
Atru.chr12.379 Acer truncatum
AUR62012137 Chenopodium quinoa
AUR62012428 Chenopodium quinoa
AUR62031551 Chenopodium quinoa
AUR62040698 Chenopodium quinoa
BcaB01g01070 Brassica carinata
BcaB06g29102 Brassica carinata
BcaC01g01955 Brassica carinata
BcaC02g07434 Brassica carinata
BcaC07g40204 Brassica carinata
BolC3t19274H Brassica oleracea
BolC4t28252H Brassica oleracea
BraA04t18478Z Brassica rapa
BraA06t25214Z Brassica rapa
C03p70190 Brassica napus
C04p67550 Brassica napus
CAN.G500.19 Capsicum annuum
CAN.G500.4 Capsicum annuum
CAN.G608.2 Capsicum annuum
CAN.G875.5 Capsicum annuum
CANSAT56G0766 Cannabis sativa
CARHR134590 Cardamine hirsuta
CARHR149910 Cardamine hirsuta
Carub.0004s2180 Capsella rubella
Carub.0005s1160 Capsella rubella
Carub.0005s1161 Capsella rubella
Carub.0005s1162 Capsella rubella
Ca_08189_v3 Cicer arietinum L.
Ca_17007_v3 Cicer arietinum L.
CBR_g34900 Chara braunii
CBR_g6688 Chara braunii
Cc02_g07420 Coffea canephora
Cc07_g19220 Coffea canephora
CDE02G1061 Ceratophyllum demersum
CDE05G0422 Ceratophyllum demersum
Cfa001425 Carpinus fangiana
Ciclev10031537m.g Citrus clementina
CiPaw.01G291400 Carya illinoinensis
CiPaw.02G186500 Carya illinoinensis
CiPaw.04G179700 Carya illinoinensis
ClCG07G003590 Citrullus lanatus
COL.COLO4_12124 Corchorus olitorius
COL.COLO4_12125 Corchorus olitorius
COL.COLO4_25492 Corchorus olitorius
Cpa.g.sc19.271 Carica papaya
Cpa.g.sc37.55 Carica papaya
Cre01.g019700 Chlamydomonas reinhardtii
Cre06.g279474 Chlamydomonas reinhardtii
Cre06.g280420 Chlamydomonas reinhardtii
Cre14.g612150 Chlamydomonas reinhardtii
CsaV3_5G008390 Cucumis sativus L.
CSS0023927 Camellia sinensis var. sinensis
CSS0041060 Camellia sinensis var. sinensis
CSS0044593 Camellia sinensis var. sinensis
CSS0046973 Camellia sinensis var. sinensis
DCAR_007700 Daucus carota
DCAR_028040 Daucus carota
Dinv04255 Davidia involucrata
Dinv16252 Davidia involucrata
Dinv26046 Davidia involucrata
Duzib106G1475 Durio zibethinus
Duzib114G0503 Durio zibethinus
ECA233G4115 Erigeron canadensis
ECA240G4282 Erigeron canadensis
EL10Ac2g04183 Beta vulgaris
EL10Ac2g04700 Beta vulgaris
Eucgr.G02961 Eucalyptus grandis
Eucgr.H05073 Eucalyptus grandis
Eucgr.J01227 Eucalyptus grandis
Eucgr.J01229 Eucalyptus grandis
Eucgr.J01230 Eucalyptus grandis
FAN01G0953 Fragaria x ananassa
FAN01G1411 Fragaria x ananassa
FAN01G2131 Fragaria x ananassa
FAN03G1385 Fragaria x ananassa
FAN06G0979 Fragaria x ananassa
FAN06G1258 Fragaria x ananassa
FAN06G1983 Fragaria x ananassa
FAN10G0876 Fragaria x ananassa
FAN10G1345 Fragaria x ananassa
FAN10G1514 Fragaria x ananassa
FAN10G2612 Fragaria x ananassa
FAN10G3047 Fragaria x ananassa
FAN19G2834 Fragaria x ananassa
FAN23G0249 Fragaria x ananassa
FAN26G0802 Fragaria x ananassa
FvH4_1g25680 Fragaria vesca
FvH4_7g23070 Fragaria vesca
FvH4_7g23071 Fragaria vesca
Glyma.06G158600 Glycine max
Glyma.11G222700 Glycine max
Glyma.18G034900 Glycine max
Gohir.A05G371100 Gossypium hirsutum
Gohir.A10G222401 Gossypium hirsutum
Gohir.D10G234700 Gossypium hirsutum
Gorai.011G268300 Gossypium raimondii
GSVIVG01016481001 Vitis vinifera
GSVIVG01022387001 Vitis vinifera
HanXRQChr03g0068371 Helianthus annuus
HanXRQChr03g0068381 Helianthus annuus
HanXRQChr08g0221161 Helianthus annuus
Haze_17118 Corylus avellana
Hma1.2p1_0026F.1_g016280 Hydrangea macrophylla
Hma1.2p1_0039F.1_g024510 Hydrangea macrophylla
HPP92_015384 Vanilla planifolia
HPP92_027009 Vanilla planifolia
Hund13795 Selenicereus undatus
Hund25872 Selenicereus undatus
Lalb_Chr11g0068761 Lupinus albus
Lalb_Chr15g0084551 Lupinus albus
Lalb_Chr18g0053061 Lupinus albus
Lj1C943T2 Lonicera japonica
Lj1g0003619 Lotus japonicus
Lj1g0021263 Lotus japonicus
Lj2g0015546 Lotus japonicus
Lj6g0023303 Lotus japonicus
Lj8C79T13 Lonicera japonica
Lsat_1_v5_gn_7_55620 Lactuca sativa
Lsat_1_v5_gn_8_14881 Lactuca sativa
Manes.10G026300 Manihot esculenta
Mapoly0027s0117 Marchantia polymorpha
MBI18_g05078_MAGBIO Magnolia biondii
MBI18_g07837_MAGBIO Magnolia biondii
MBI18_g30038_MAGBIO Magnolia biondii
MBI18_g39154_MAGBIO Magnolia biondii
MBI18_g45457_MAGBIO Magnolia biondii
MCO10G360 Micromonas commoda
MD01G1139300 Malus domestica
Medtr3g068215 Medicago truncatula
Medtr3g097090 Medicago truncatula
MELO3C023887.2 Cucumis melo
MELO3C032685.2 Cucumis melo
Migut.B01009 Erythranthe guttata
Migut.F00748 Erythranthe guttata
Migut.F00749 Erythranthe guttata
Migut.F00750 Erythranthe guttata
MSTRG.27366 Avicennia marina
Nitab4.5_0000878g0020 Nicotiana tabacum
Nitab4.5_0002762g0020 Nicotiana tabacum
Nitab4.5_0004074g0010 Nicotiana tabacum
Nitab4.5_0004601g0020 Nicotiana tabacum
Nitab4.5_0004974g0050 Nicotiana tabacum
Nitab4.5_0005829g0010 Nicotiana tabacum
Nitab4.5_0005829g0030 Nicotiana tabacum
Nn2g13475 Nelumbo nucifera
Nn7g38299 Nelumbo nucifera
Oeu008805.1 Olea europaea
Oeu008806.1 Olea europaea
Oeu017562.1 Olea europaea
Oeu031281.1 Olea europaea
Oeu033678.1 Olea europaea
Oeu033679.1 Olea europaea
Oeu036483.1 Olea europaea
Oeu039015.1 Olea europaea
Oeu042313.1 Olea europaea
Oeu056990.2 Olea europaea
Os01g0846450 Oryza sativa ssp. japonica
Os01g0846500 Oryza sativa ssp. japonica
Os08g0559900 Oryza sativa ssp. japonica
Peaxi162Scf00047g00842 Petunia axillaris
Peaxi162Scf00126g00240 Petunia axillaris
Peaxi162Scf00658g00422 Petunia axillaris
PGR102G2824 Punica granatum
PGR142G0412 Punica granatum
PGSC0003DMG400022934 Solanum tuberosum
PGSC0003DMG400029638 Solanum tuberosum
PGSC0003DMG400042174 Solanum tuberosum
PGSC0003DMG400042722 Solanum tuberosum
PGSC0003DMG400044542 Solanum tuberosum
PGSC0003DMG401023823 Solanum tuberosum
PGSC0003DMG402023823 Solanum tuberosum
Phvul.001G236100 Phaseolus vulgaris
Potri.008G059301 Populus trichocarpa
Potri.010G199500 Populus trichocarpa
Pp3c23_15730 Physcomitrium patens
Pp3c9_24560 Physcomitrium patens
Pp3c9_24568 Physcomitrium patens
PRCOL_00004672 Prasinoderma coloniale
Prupe.2G239800 Prunus persica
Prupe.4G282700 Prunus persica
Psat0s4218g0040 Pisum sativum
Psat5g058280 Pisum sativum
PSO017G7355 Papaver somniferum
PSO063G2902 Papaver somniferum
PSO339G0723 Papaver somniferum
PSO339G1200 Papaver somniferum
PSO339G5487 Papaver somniferum
PSO478G1772 Papaver somniferum
PSO513G0013 Papaver somniferum
PSO513G0123 Papaver somniferum
PSO541G2586 Papaver somniferum
PSO675G7771 Papaver somniferum
QL08p061261 Quercus lobata
QL08p061268 Quercus lobata
QL08p061277 Quercus lobata
QL08p061292 Quercus lobata
QL08p061313 Quercus lobata
QL08p061332 Quercus lobata
RcHm_v2.0_Chr1g0368311 Rosa chinensis
RcHm_v2.0_Chr1g0368321 Rosa chinensis
RcHm_v2.0_Chr2g0124151 Rosa chinensis
Rhsim03G0133800 Rhododendron simsii
Rhsim09G0013600 Rhododendron simsii
Sabra10G0153800 Salix brachista
SalBow5G0406 Salvia bowleyana
SalBow5G5569 Salvia bowleyana
SalBow7G3093 Salvia bowleyana
Sc11g0007710 Simmondsia chinensis
Sc23g0006640 Simmondsia chinensis
Sed0012358 Sechium edule
Sed0020180 Sechium edule
SEGI_06959 Sequoiadendron giganteum
SEGI_11088 Sequoiadendron giganteum
SEGI_12858 Sequoiadendron giganteum
SEGI_27664 Sequoiadendron giganteum
SEGI_32311 Sequoiadendron giganteum
SGA_v2.0_scaffold189G40383 Striga asiatica
SGA_v2.0_scaffold2G01047 Striga asiatica
SGA_v2.0_scaffold4G01944 Striga asiatica
SHI13691 Sapria himalayana
SMO128G0003 Selaginella moellendorffii
SMO141G0048 Selaginella moellendorffii
SMO351G0481 Selaginella moellendorffii
Solyc06g051790.4 Solanum lycopersicum
Solyc09g091860.4 Solanum lycopersicum
Solyc11g044900.2 Solanum lycopersicum
Sopen06g017790 Solanum pennellii
Sopen09g034750 Solanum pennellii
Sopen11g020390 Solanum pennellii
Sp4g22010 Schrenkiella parvula
Sp5g15760 Schrenkiella parvula
Sp5g15790 Schrenkiella parvula
TAR369G0879 Trochodendron aralioides
TAR623G0068 Trochodendron aralioides
TAR623G1792 Trochodendron aralioides
TAR627G0445 Trochodendron aralioides
THA.LOC104810046 Tarenaya hassleriana
Thecc.01G143400 Theobroma cacao
Thecc.10G039300 Theobroma cacao
Thhalv10002762m.g Eutrema salsugineum
Thhalv10016564m.g Eutrema salsugineum
TPR.G7854 Trifolium pratense
TWI63G1558 Tripterygium wilfordii
TWI79G0342 Tripterygium wilfordii
unitig_0.g1623 Utricularia gibba
unitig_736.g22772 Utricularia gibba
vmacro00656 Vaccinium macrocarpon
VMungo1383G2026 Vigna mungo
Zm00001eb148120 Zea mays
Zm00001eb175960 Zea mays

User provided reference genes

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