Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00600 Brassica napus
A08p37160 Brassica napus
A09p20880 Brassica napus
A10p33350 Brassica napus
Aa31LG1G22480 Aethionema arabicum
Aa31LG1G9090 Aethionema arabicum
Aa31LG5G3160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2715 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.696 Anthoceros agrestis
Actinidia01493 Actinidia chinensis
Actinidia01494 Actinidia chinensis
Actinidia01670 Actinidia chinensis
Actinidia09534 Actinidia chinensis
Actinidia09535 Actinidia chinensis
Actinidia25802 Actinidia chinensis
Ah.06g196250 Amaranthus hybridus
Ah.12g062690 Amaranthus hybridus
AL1G13490 Arabidopsis lyrata
AL6G11530 Arabidopsis lyrata
AL8G15930 Arabidopsis lyrata
Aqoxy5G00207 Aquilegia oxysepala
Aqoxy5G02737 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2ZBI42 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B4GIY0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RIY87W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.THA6J1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJ54L4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TL3XAC Arachis hypogaea
AT1G03905 Arabidopsis thaliana
AT5G02270 Arabidopsis thaliana
AT5G44110 Arabidopsis thaliana
ATR0693G037 Amborella trichopoda
ATR0736G131 Amborella trichopoda
Atru.chr5.1732 Acer truncatum
Atru.chr8.1982 Acer truncatum
AUR62000435 Chenopodium quinoa
AUR62006780 Chenopodium quinoa
AUR62018199 Chenopodium quinoa
AUR62038687 Chenopodium quinoa
BcaB01g06155 Brassica carinata
BcaB01g06220 Brassica carinata
BcaB05g23907 Brassica carinata
BcaB07g30970 Brassica carinata
BcaC02g12026 Brassica carinata
BcaC04g21864 Brassica carinata
BcaNung07063 Brassica carinata
BolC8t46882H Brassica oleracea
BolC9t55543H Brassica oleracea
BolC9t60159H Brassica oleracea
BraA03t09450Z Brassica rapa
BraA08t35615Z Brassica rapa
BraA09t37689Z Brassica rapa
BraA10t45366Z Brassica rapa
C03p00870 Brassica napus
C04p08830 Brassica napus
C08p00830 Brassica napus
C08p00850 Brassica napus
C09p26410 Brassica napus
C09p74260 Brassica napus
CAN.G1070.10 Capsicum annuum
CAN.G1076.47 Capsicum annuum
CAN.G13.12 Capsicum annuum
CAN.G1511.3 Capsicum annuum
CANSAT01G3046 Cannabis sativa
CANSAT54G0224 Cannabis sativa
CARHR003230 Cardamine hirsuta
CARHR179160 Cardamine hirsuta
CARHR211100 Cardamine hirsuta
Carub.0001s0305 Capsella rubella
Carub.0006s0111 Capsella rubella
Carub.0008s0442 Capsella rubella
Ca_09669_v3 Cicer arietinum L.
CBR_g28535 Chara braunii
CBR_g30515 Chara braunii
CBR_g58145 Chara braunii
Cc01_g18170 Coffea canephora
Cc02_g35400 Coffea canephora
CDE02G1988 Ceratophyllum demersum
CDE04G0386 Ceratophyllum demersum
CDE08G0549 Ceratophyllum demersum
CDE08G0942 Ceratophyllum demersum
CDE08G1594 Ceratophyllum demersum
Cfa006730 Carpinus fangiana
Cfa022254 Carpinus fangiana
Cfa023896 Carpinus fangiana
Ciclev10012095m.g Citrus clementina
Ciclev10021439m.g Citrus clementina
CiPaw.03G266500 Carya illinoinensis
CiPaw.07G032700 Carya illinoinensis
CiPaw.08G153200 Carya illinoinensis
ClCG01G010800 Citrullus lanatus
ClCG09G008310 Citrullus lanatus
COL.COLO4_04020 Corchorus olitorius
COL.COLO4_14790 Corchorus olitorius
Cpa.g.sc165.17 Carica papaya
Cpa.g.sc260.7 Carica papaya
Cre13.g580300 Chlamydomonas reinhardtii
Cre17.g731050 Chlamydomonas reinhardtii
CsaV3_1G015760 Cucumis sativus L.
CsaV3_7G026750 Cucumis sativus L.
CSS0018724 Camellia sinensis var. sinensis
CSS0029925 Camellia sinensis var. sinensis
CSS0030452 Camellia sinensis var. sinensis
DCAR_001898 Daucus carota
DCAR_018496 Daucus carota
Dinv24483 Davidia involucrata
Dinv34640 Davidia involucrata
Duzib093G2011 Durio zibethinus
Duzib106G1472 Durio zibethinus
Duzib138G1702 Durio zibethinus
ECA236G4625 Erigeron canadensis
ECA246G1410 Erigeron canadensis
EL10Ac2g03149 Beta vulgaris
EL10Ac4g09511 Beta vulgaris
EL10Ac4g09562 Beta vulgaris
Eucgr.A00692 Eucalyptus grandis
Eucgr.H01294 Eucalyptus grandis
FAN02G2552 Fragaria x ananassa
FAN05G4162 Fragaria x ananassa
FAN09G3356 Fragaria x ananassa
FAN14G3133 Fragaria x ananassa
FAN15G0458 Fragaria x ananassa
FAN20G1305 Fragaria x ananassa
FAN24G0682 Fragaria x ananassa
FvH4_2g21190 Fragaria vesca
FvH4_6g08040 Fragaria vesca
Glyma.10G145200 Glycine max
Glyma.13G124700 Glycine max
Glyma.20G094300 Glycine max
Glyma.20G094400 Glycine max
Gohir.A07G213820 Gossypium hirsutum
Gohir.A11G327000 Gossypium hirsutum
Gohir.D07G220200 Gossypium hirsutum
Gohir.D11G345900 Gossypium hirsutum
Gorai.001G254500 Gossypium raimondii
Gorai.007G376200 Gossypium raimondii
GSVIVG01028360001 Vitis vinifera
GSVIVG01031286001 Vitis vinifera
HanXRQChr06g0172431 Helianthus annuus
HanXRQChr10g0302411 Helianthus annuus
HanXRQChr16g0518521 Helianthus annuus
HanXRQChr17g0550561 Helianthus annuus
Haze_04030 Corylus avellana
Haze_24652 Corylus avellana
Hma1.2p1_0273F.1_g109530 Hydrangea macrophylla
Hma1.2p1_0726F.1_g208950 Hydrangea macrophylla
Hma1.2p1_1553F.1_g290230 Hydrangea macrophylla
HPP92_012778 Vanilla planifolia
HPP92_022059 Vanilla planifolia
Hund13124 Selenicereus undatus
Hund21853 Selenicereus undatus
Lalb_Chr02g0152581 Lupinus albus
Lalb_Chr06g0167391 Lupinus albus
Lj1C69G13 Lonicera japonica
Lj2A1148T50 Lonicera japonica
Lj5g0004195 Lotus japonicus
Lj5g0016202 Lotus japonicus
Lju99C10T11 Lonicera japonica
Lsat_1_v5_gn_3_61220 Lactuca sativa
Lsat_1_v5_gn_8_92521 Lactuca sativa
Manes.08G080200 Manihot esculenta
Manes.12G033800 Manihot esculenta
Mapoly0016s0142 Marchantia polymorpha
Mapoly0067s0085 Marchantia polymorpha
MBI07_g16901_MAGBIO Magnolia biondii
MBI19_g32694_MAGBIO Magnolia biondii
MCO10G024 Micromonas commoda
MCO13G095 Micromonas commoda
MD03G1234700 Malus domestica
MD04G1190300 Malus domestica
MD04G1190400 Malus domestica
MD04G1190700 Malus domestica
MD04G1190800 Malus domestica
MD05G1194500 Malus domestica
MD12G1203100 Malus domestica
Medtr1g069750 Medicago truncatula
Medtr1g084720 Medicago truncatula
MELO3C021130.2 Cucumis melo
MELO3C025524.2 Cucumis melo
Migut.B00855 Erythranthe guttata
Migut.D00441 Erythranthe guttata
Migut.N00957 Erythranthe guttata
MSTRG.17499 Avicennia marina
MSTRG.27921 Avicennia marina
Nitab4.5_0003044g0090 Nicotiana tabacum
Nitab4.5_0007062g0020 Nicotiana tabacum
Nitab4.5_0011298g0010 Nicotiana tabacum
Nitab4.5_0020128g0010 Nicotiana tabacum
Nn1g06878 Nelumbo nucifera
Nn3g21835 Nelumbo nucifera
Nn8g40376 Nelumbo nucifera
Oeu033760.1 Olea europaea
Oeu052941.1 Olea europaea
Oeu053744.1 Olea europaea
Os02g0810300 Oryza sativa ssp. japonica
Os03g0316900 Oryza sativa ssp. japonica
Peaxi162Scf00357g00622 Petunia axillaris
Peaxi162Scf00624g00033 Petunia axillaris
PGR031G0862 Punica granatum
PGR031G2560 Punica granatum
PGSC0003DMG400002789 Solanum tuberosum
PGSC0003DMG400010314 Solanum tuberosum
Phvul.007G191500 Phaseolus vulgaris
Phvul.007G203500 Phaseolus vulgaris
Potri.002G036300 Populus trichocarpa
Potri.003G155800 Populus trichocarpa
Potri.005G226600 Populus trichocarpa
Potri.006G086000 Populus trichocarpa
Pp3c27_7710 Physcomitrium patens
Pp3c8_3670 Physcomitrium patens
PRCOL_00000844 Prasinoderma coloniale
PRCOL_00003673 Prasinoderma coloniale
Prupe.6G308800 Prunus persica
Prupe.8G221200 Prunus persica
Psat6g061360 Pisum sativum
Psat6g153720 Pisum sativum
PSO210G5663 Papaver somniferum
PSO210G6376 Papaver somniferum
PSO724G0808 Papaver somniferum
PSO729G0056 Papaver somniferum
QL03p017774 Quercus lobata
QL09p039674 Quercus lobata
RcHm_v2.0_Chr1g0326881 Rosa chinensis
RcHm_v2.0_Chr1g0332741 Rosa chinensis
RcHm_v2.0_Chr2g0097941 Rosa chinensis
RcHm_v2.0_Chr3g0457711 Rosa chinensis
RcHm_v2.0_Chr5g0049941 Rosa chinensis
RcHm_v2.0_Chr5g0083331 Rosa chinensis
RcHm_v2.0_Chr6g0287691 Rosa chinensis
RcHm_v2.0_Chr7g0234131 Rosa chinensis
Rhsim01G0130300 Rhododendron simsii
Rhsim01G0262300 Rhododendron simsii
Rhsim05G0130100 Rhododendron simsii
RhsimUnG0037800 Rhododendron simsii
Sabra02G0029500 Salix brachista
Sabra06G0065600 Salix brachista
SalBow3G1703 Salvia bowleyana
SalBow4G3143 Salvia bowleyana
Sc06g0005690 Simmondsia chinensis
Sc15g0006950 Simmondsia chinensis
Sed0003162 Sechium edule
Sed0015312 Sechium edule
SEGI_01796 Sequoiadendron giganteum
SEGI_31808 Sequoiadendron giganteum
SGA_v2.0_scaffold152G36884 Striga asiatica
SGA_v2.0_scaffold1G00625 Striga asiatica
SGA_v2.0_scaffold4G01983 Striga asiatica
SGA_v2.0_scaffold87G26959 Striga asiatica
SGA_v2.0_scaffold87G26965 Striga asiatica
SHI12690 Sapria himalayana
SMO118G0322 Selaginella moellendorffii
SMO367G1273 Selaginella moellendorffii
Solyc01g100850.3 Solanum lycopersicum
Solyc09g066470.4 Solanum lycopersicum
Sopen01g044350 Solanum pennellii
Sopen09g028200 Solanum pennellii
Sp1g02760 Schrenkiella parvula
Sp2g08935 Schrenkiella parvula
Sp6g40180 Schrenkiella parvula
TAR362G0736 Trochodendron aralioides
TAR362G0833 Trochodendron aralioides
TAR633G1685 Trochodendron aralioides
THA.LOC104801149 Tarenaya hassleriana
THA.LOC104827018 Tarenaya hassleriana
Thecc.01G255600 Theobroma cacao
Thecc.05G038800 Theobroma cacao
Thecc.10G138500 Theobroma cacao
Thhalv10003252m.g Eutrema salsugineum
Thhalv10008378m.g Eutrema salsugineum
Thhalv10014095m.g Eutrema salsugineum
TPR.G2594 Trifolium pratense
TPR.G35709 Trifolium pratense
TWI12G1304 Tripterygium wilfordii
TWI53G0157 Tripterygium wilfordii
TWI77G1018 Tripterygium wilfordii
unitig_32.g11535 Utricularia gibba
vmacro14813 Vaccinium macrocarpon
vmacro19773 Vaccinium macrocarpon
VMungo0720G0820 Vigna mungo
VMungo0720G2686 Vigna mungo
Zm00001eb191710 Zea mays
Zm00001eb395610 Zea mays

User provided reference genes

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