Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03030 Brassica napus
A03p07140 Brassica napus
A04p12050 Brassica napus
A05p10460 Brassica napus
Aa31LG10G16890 Aethionema arabicum
Aa31LG11G14140 Aethionema arabicum
Aa31LG9G16630 Aethionema arabicum
Actinidia01968 Actinidia chinensis
Actinidia01977 Actinidia chinensis
Ah.01g015120 Amaranthus hybridus
Ah.01g015130 Amaranthus hybridus
Ah.11g046850 Amaranthus hybridus
AL5G45880 Arabidopsis lyrata
AL6G26290 Arabidopsis lyrata
AL7G51110 Arabidopsis lyrata
Aqoxy2G03254 Aquilegia oxysepala
Aqoxy3G00464 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.56XWA4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9HCL1H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7U3FX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BT624K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GVJS70 Arachis hypogaea
AT3G63060 Arabidopsis thaliana
AT5G15440 Arabidopsis thaliana
AT5G39360 Arabidopsis thaliana
ATR0064G118 Amborella trichopoda
ATR0661G424 Amborella trichopoda
Atru.chr5.1364 Acer truncatum
Atru.chr8.389 Acer truncatum
AUR62018153 Chenopodium quinoa
AUR62042565 Chenopodium quinoa
BcaB01g05054 Brassica carinata
BcaB01g05056 Brassica carinata
BcaB02g09438 Brassica carinata
BcaB02g09443 Brassica carinata
BcaB02g09454 Brassica carinata
BcaB02g09459 Brassica carinata
BcaB06g27293 Brassica carinata
BcaB06g28838 Brassica carinata
BcaC02g11635 Brassica carinata
BolC3t13310H Brassica oleracea
BolC4t22930H Brassica oleracea
BolC4t26154H Brassica oleracea
BraA03t10036Z Brassica rapa
BraA04t16869Z Brassica rapa
BraA05t19983Z Brassica rapa
C03p08130 Brassica napus
C04p12860 Brassica napus
C04p45700 Brassica napus
CAN.G1297.7 Capsicum annuum
CAN.G1682.17 Capsicum annuum
CAN.G206.201 Capsicum annuum
CANSAT25G2185 Cannabis sativa
CANSAT64G1973 Cannabis sativa
CARHR173360 Cardamine hirsuta
CARHR197880 Cardamine hirsuta
CARHR263030 Cardamine hirsuta
Carub.0005s2971 Capsella rubella
Carub.0006s1360 Capsella rubella
Carub.0007s3656 Capsella rubella
Ca_04870_v3 Cicer arietinum L.
Ca_06809_v3 Cicer arietinum L.
Cc07_g03920 Coffea canephora
CDE10G0097 Ceratophyllum demersum
CDE10G0416 Ceratophyllum demersum
Cfa006107 Carpinus fangiana
Cfa007626 Carpinus fangiana
Ciclev10012574m.g Citrus clementina
Ciclev10020962m.g Citrus clementina
CiPaw.03G091300 Carya illinoinensis
CiPaw.04G058200 Carya illinoinensis
CiPaw.07G094400 Carya illinoinensis
CiPaw.08G103300 Carya illinoinensis
ClCG05G014070 Citrullus lanatus
ClCG07G000060 Citrullus lanatus
COL.COLO4_09138 Corchorus olitorius
COL.COLO4_21379 Corchorus olitorius
Cpa.g.sc14.146 Carica papaya
Cpa.g.sc485.1 Carica papaya
CsaV3_3G026310 Cucumis sativus L.
CsaV3_6G036880 Cucumis sativus L.
CSS0007324 Camellia sinensis var. sinensis
CSS0014787 Camellia sinensis var. sinensis
CSS0019800 Camellia sinensis var. sinensis
CSS0021933 Camellia sinensis var. sinensis
CSS0030202 Camellia sinensis var. sinensis
CSS0035121 Camellia sinensis var. sinensis
CSS0038318 Camellia sinensis var. sinensis
CSS0044910 Camellia sinensis var. sinensis
DCAR_011055 Daucus carota
DCAR_012457 Daucus carota
DCAR_025410 Daucus carota
Dinv32960 Davidia involucrata
Dinv33199 Davidia involucrata
Duzib138G0181 Durio zibethinus
Duzib147G0526 Durio zibethinus
Duzib187G0279 Durio zibethinus
Duzib264G0540 Durio zibethinus
ECA238G1727 Erigeron canadensis
ECA247G2495 Erigeron canadensis
EL10Ac2g03083 Beta vulgaris
EL10Ac5g11291 Beta vulgaris
Eucgr.H01519 Eucalyptus grandis
Eucgr.I00718 Eucalyptus grandis
Eucgr.J01222 Eucalyptus grandis
FAN02G4530 Fragaria x ananassa
FAN05G1901 Fragaria x ananassa
FAN09G2709 Fragaria x ananassa
FAN14G1202 Fragaria x ananassa
FAN15G0010 Fragaria x ananassa
FAN24G0944 Fragaria x ananassa
FAN27G0839 Fragaria x ananassa
FvH4_2g23930 Fragaria vesca
FvH4_6g47430 Fragaria vesca
Glyma.08G242000 Glycine max
Glyma.13G058800 Glycine max
Glyma.18G264200 Glycine max
Glyma.19G027700 Glycine max
Gohir.A05G370466 Gossypium hirsutum
Gohir.A05G370600 Gossypium hirsutum
Gohir.A08G185300 Gossypium hirsutum
Gohir.A09G011500 Gossypium hirsutum
Gohir.A12G006100 Gossypium hirsutum
Gohir.D04G045000 Gossypium hirsutum
Gohir.D08G203400 Gossypium hirsutum
Gohir.D09G010500 Gossypium hirsutum
Gohir.D12G005600 Gossypium hirsutum
Gorai.004G215400 Gossypium raimondii
Gorai.006G012100 Gossypium raimondii
Gorai.008G005400 Gossypium raimondii
Gorai.012G050200 Gossypium raimondii
GSVIVG01011098001 Vitis vinifera
GSVIVG01011492001 Vitis vinifera
HanXRQChr10g0282891 Helianthus annuus
HanXRQChr15g0488711 Helianthus annuus
Haze_04743 Corylus avellana
Haze_14470 Corylus avellana
Hma1.2p1_0221F.1_g093090 Hydrangea macrophylla
Hma1.2p1_0257F.1_g103760 Hydrangea macrophylla
Hma1.2p1_1741F.1_g300110 Hydrangea macrophylla
Hma1.2p1_3742F.1_g337440 Hydrangea macrophylla
HPP92_001143 Vanilla planifolia
HPP92_002064 Vanilla planifolia
HPP92_006790 Vanilla planifolia
HPP92_006793 Vanilla planifolia
HPP92_010150 Vanilla planifolia
HPP92_010159 Vanilla planifolia
HPP92_012503 Vanilla planifolia
Hund13167 Selenicereus undatus
Lalb_Chr06g0175081 Lupinus albus
Lalb_Chr21g0318461 Lupinus albus
Lalb_Chr24g0396391 Lupinus albus
Lj2g0005081 Lotus japonicus
Lj2P1177T25 Lonicera japonica
Lj3g0026743 Lotus japonicus
Lj4P116T28 Lonicera japonica
Lju41C6T9 Lonicera japonica
Lsat_1_v5_gn_4_170261 Lactuca sativa
Lsat_1_v5_gn_9_4400 Lactuca sativa
Manes.01G098800 Manihot esculenta
Manes.02G051300 Manihot esculenta
Manes.05G073600 Manihot esculenta
MBI19_g03949_MAGBIO Magnolia biondii
MD03G1268700 Malus domestica
MD09G1061500 Malus domestica
Medtr6g013530 Medicago truncatula
Medtr7g012790 Medicago truncatula
MELO3C014347.2 Cucumis melo
MELO3C014931.2 Cucumis melo
Migut.D00265 Erythranthe guttata
Migut.H00651 Erythranthe guttata
Migut.K01292 Erythranthe guttata
Migut.N02154 Erythranthe guttata
MSTRG.15458 Avicennia marina
MSTRG.17434 Avicennia marina
MSTRG.18217 Avicennia marina
MSTRG.3345 Avicennia marina
Nitab4.5_0000565g0120 Nicotiana tabacum
Nitab4.5_0000759g0040 Nicotiana tabacum
Nitab4.5_0003630g0020 Nicotiana tabacum
Nitab4.5_0006180g0020 Nicotiana tabacum
Nitab4.5_0007767g0010 Nicotiana tabacum
Nitab4.5_0008213g0030 Nicotiana tabacum
Nn1g02149 Nelumbo nucifera
Nn4g23348 Nelumbo nucifera
Nn4g26180 Nelumbo nucifera
Oeu000856.1 Olea europaea
Oeu011167.1 Olea europaea
Oeu014750.1 Olea europaea
Oeu014752.1 Olea europaea
Oeu020661.1 Olea europaea
Oeu022291.1 Olea europaea
Oeu023715.1 Olea europaea
Os01g0802600 Oryza sativa ssp. japonica
Os03g0427000 Oryza sativa ssp. japonica
Os05g0494600 Oryza sativa ssp. japonica
Os07g0598200 Oryza sativa ssp. japonica
Peaxi162Scf00104g00013 Petunia axillaris
Peaxi162Scf00166g00652 Petunia axillaris
Peaxi162Scf00629g00311 Petunia axillaris
Peaxi162Scf00783g00313 Petunia axillaris
PGR004G1793 Punica granatum
PGR119G0593 Punica granatum
PGSC0003DMG400001353 Solanum tuberosum
PGSC0003DMG400020122 Solanum tuberosum
PGSC0003DMG400042481 Solanum tuberosum
Phvul.004G033800 Phaseolus vulgaris
Phvul.005G159500 Phaseolus vulgaris
Phvul.008G035700 Phaseolus vulgaris
Potri.004G125000 Populus trichocarpa
Potri.017G090300 Populus trichocarpa
Pp3c4_11290 Physcomitrium patens
Prupe.3G258700 Prunus persica
Prupe.8G244600 Prunus persica
Psat1g069520 Pisum sativum
Psat3g200840 Pisum sativum
PSO017G0834 Papaver somniferum
PSO407G0148 Papaver somniferum
PSO478G3218 Papaver somniferum
PSO541G6267 Papaver somniferum
PSO675G0120 Papaver somniferum
QL02p039501 Quercus lobata
QL12p022505 Quercus lobata
RcHm_v2.0_Chr2g0166511 Rosa chinensis
RcHm_v2.0_Chr6g0291561 Rosa chinensis
Rhsim08G0073700 Rhododendron simsii
Rhsim10G0045400 Rhododendron simsii
Rhsim13G0022500 Rhododendron simsii
Sabra04G0089600 Salix brachista
Sabra17G0079500 Salix brachista
SalBow1G4045 Salvia bowleyana
SalBow1G6835 Salvia bowleyana
SalBow4G3315 Salvia bowleyana
Sc10g0003270 Simmondsia chinensis
Sc24g0004130 Simmondsia chinensis
Sed0005703 Sechium edule
SEGI_28388 Sequoiadendron giganteum
SEGI_32380 Sequoiadendron giganteum
SEGI_33966 Sequoiadendron giganteum
SGA_v2.0_scaffold148G36482 Striga asiatica
SGA_v2.0_scaffold1G00450 Striga asiatica
SHI16429 Sapria himalayana
SHI21504 Sapria himalayana
SMO356G0542 Selaginella moellendorffii
Solyc02g088590.4 Solanum lycopersicum
Solyc06g084320.1 Solanum lycopersicum
Solyc09g064820.1 Solanum lycopersicum
Sopen02g033320 Solanum pennellii
Sopen06g035710 Solanum pennellii
Sopen09g026530 Solanum pennellii
Sp4g17560 Schrenkiella parvula
Sp6g28660 Schrenkiella parvula
Sp7g02610 Schrenkiella parvula
TAR362G0402 Trochodendron aralioides
TAR365G0626 Trochodendron aralioides
TAR365G1109 Trochodendron aralioides
TAR371G0698 Trochodendron aralioides
TAR629G0704 Trochodendron aralioides
THA.LOC104805499 Tarenaya hassleriana
THA.LOC104817547 Tarenaya hassleriana
THA.LOC104822342 Tarenaya hassleriana
THA.LOC104823055 Tarenaya hassleriana
THA.LOC104823894 Tarenaya hassleriana
Thecc.01G283500 Theobroma cacao
Thecc.04G091100 Theobroma cacao
Thhalv10014230m.g Eutrema salsugineum
Thhalv10027898m.g Eutrema salsugineum
TPR.G26203 Trifolium pratense
TPR.G33451 Trifolium pratense
TWI32G0249 Tripterygium wilfordii
TWI34G1813 Tripterygium wilfordii
TWI59G0819 Tripterygium wilfordii
vmacro02550 Vaccinium macrocarpon
vmacro05663 Vaccinium macrocarpon
vmacro18161 Vaccinium macrocarpon
VMungo0464G0804 Vigna mungo
VMungo1080G1371 Vigna mungo
VMungo1383G0104 Vigna mungo
Zm00001eb020350 Zea mays
Zm00001eb108420 Zea mays
Zm00001eb150610 Zea mays
Zm00001eb291540 Zea mays
Zm00001eb326680 Zea mays
Zm00001eb352370 Zea mays

User provided reference genes

Program Settings