Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p21510 Brassica napus
A03p55580 Brassica napus
A04p29500 Brassica napus
A05p07440 Brassica napus
A05p15170 Brassica napus
A06p37970 Brassica napus
Aa31LG5G23240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2280 Anthoceros agrestis
Actinidia02488 Actinidia chinensis
Actinidia20811 Actinidia chinensis
Actinidia31884 Actinidia chinensis
Actinidia38512 Actinidia chinensis
Ah.14g083620 Amaranthus hybridus
Ah.15g092720 Amaranthus hybridus
AL4G35950 Arabidopsis lyrata
Aqoxy4G03321 Aquilegia oxysepala
Aqoxy6G03066 Aquilegia oxysepala
Aqoxy7G02680 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1UA1UD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3HZ9SA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.716CPG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7BQC11 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9Q6XN1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BCLI4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FGF3C7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H1YIGD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NJ2U5L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R7HTY3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SU5HAA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W17ZP3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5DY3W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YU79V3 Arachis hypogaea
AT2G38670 Arabidopsis thaliana
ATR0049G026 Amborella trichopoda
ATR0626G162 Amborella trichopoda
ATR1127G128 Amborella trichopoda
Atru.chr11.1226 Acer truncatum
Atru.chr12.2075 Acer truncatum
Atru.chr8.24 Acer truncatum
AUR62008767 Chenopodium quinoa
AUR62021339 Chenopodium quinoa
AUR62025471 Chenopodium quinoa
AUR62033254 Chenopodium quinoa
BcaC02g07453 Brassica carinata
BcaC02g11955 Brassica carinata
BcaC06g35937 Brassica carinata
BcaNung02095 Brassica carinata
BolC3t14937H Brassica oleracea
BolC4t22479H Brassica oleracea
BolC4t28183H Brassica oleracea
BolC7t41384H Brassica oleracea
BolC7t44564H Brassica oleracea
BolC8t47982H Brassica oleracea
BraA03t11387Z Brassica rapa
BraA04t18417Z Brassica rapa
BraA05t19709Z Brassica rapa
BraA06t26713Z Brassica rapa
BraA09t39590Z Brassica rapa
C03p25500 Brassica napus
C04p08900 Brassica napus
C04p66820 Brassica napus
C07p40310 Brassica napus
CAN.G1092.2 Capsicum annuum
CAN.G33.11 Capsicum annuum
CANSAT21G2069 Cannabis sativa
CANSAT80G0334 Cannabis sativa
CARHR133340 Cardamine hirsuta
Carub.0004s2065 Capsella rubella
Ca_07806_v3 Cicer arietinum L.
Ca_17411_v3 Cicer arietinum L.
Ca_30623_v3 Cicer arietinum L.
CBR_g19052 Chara braunii
Cc00_g16160 Coffea canephora
Cc06_g00040 Coffea canephora
CDE04G1173 Ceratophyllum demersum
CDE06G0108 Ceratophyllum demersum
CDE07G0973 Ceratophyllum demersum
Cfa016979 Carpinus fangiana
Cfa022026 Carpinus fangiana
Ciclev10011809m.g Citrus clementina
Ciclev10011843m.g Citrus clementina
CiPaw.10G167300 Carya illinoinensis
CiPaw.15G154700 Carya illinoinensis
ClCG06G014010 Citrullus lanatus
ClCG10G022910 Citrullus lanatus
ClCG10G022930 Citrullus lanatus
COL.COLO4_24834 Corchorus olitorius
Cpa.g.c28877.1 Carica papaya
Cpa.g.sc115.43 Carica papaya
Cpa.g.sc322.1 Carica papaya
Cre12.g539000 Chlamydomonas reinhardtii
CsaV3_1G032230 Cucumis sativus L.
CsaV3_3G032910 Cucumis sativus L.
CSS0013553 Camellia sinensis var. sinensis
CSS0021313 Camellia sinensis var. sinensis
DCAR_015319 Daucus carota
DCAR_019824 Daucus carota
Dinv02619 Davidia involucrata
Dinv16917 Davidia involucrata
Duzib150G0552 Durio zibethinus
Duzib151G0012 Durio zibethinus
Duzib168G1798 Durio zibethinus
ECA234G3030 Erigeron canadensis
ECA240G1463 Erigeron canadensis
ECA247G0468 Erigeron canadensis
EL10Ac6g14638 Beta vulgaris
EL10Ac6g14639 Beta vulgaris
EL10Ac6g14642 Beta vulgaris
EL10Ac7g17651 Beta vulgaris
EL10Ac8g18325 Beta vulgaris
Eucgr.C02186 Eucalyptus grandis
Eucgr.K01317 Eucalyptus grandis
FAN02G0474 Fragaria x ananassa
FAN05G3430 Fragaria x ananassa
FAN07G2547 Fragaria x ananassa
FAN09G4718 Fragaria x ananassa
FAN12G0955 Fragaria x ananassa
FAN14G4486 Fragaria x ananassa
FAN17G1171 Fragaria x ananassa
FAN22G1554 Fragaria x ananassa
FvH4_4g06460 Fragaria vesca
FvH4_6g09110 Fragaria vesca
Glyma.05G221700 Glycine max
Glyma.08G028200 Glycine max
Glyma.09G270100 Glycine max
Glyma.18G220000 Glycine max
Gohir.A02G000600 Gossypium hirsutum
Gohir.A08G080800 Gossypium hirsutum
Gohir.A13G207600 Gossypium hirsutum
Gohir.D02G000900 Gossypium hirsutum
Gohir.D08G090900 Gossypium hirsutum
Gohir.D13G212100 Gossypium hirsutum
Gorai.004G096200 Gossypium raimondii
Gorai.005G001400 Gossypium raimondii
Gorai.013G242400 Gossypium raimondii
GSVIVG01029831001 Vitis vinifera
GSVIVG01035161001 Vitis vinifera
HanXRQChr01g0026381 Helianthus annuus
HanXRQChr03g0067211 Helianthus annuus
HanXRQChr05g0131911 Helianthus annuus
HanXRQChr10g0286531 Helianthus annuus
HanXRQChr12g0359281 Helianthus annuus
HanXRQChr12g0359291 Helianthus annuus
HanXRQChr15g0464641 Helianthus annuus
Haze_19039 Corylus avellana
Haze_21227 Corylus avellana
Haze_26737 Corylus avellana
Hma1.2p1_0022F.1_g014770 Hydrangea macrophylla
HPP92_019036 Vanilla planifolia
HPP92_021990 Vanilla planifolia
Hund05471 Selenicereus undatus
Hund09053 Selenicereus undatus
Hund18306 Selenicereus undatus
Hund18309 Selenicereus undatus
Hund26316 Selenicereus undatus
Lalb_Chr05g0223701 Lupinus albus
Lalb_Chr05g0223711 Lupinus albus
Lalb_Chr09g0331901 Lupinus albus
Lalb_Chr16g0390881 Lupinus albus
Lalb_Chr19g0123871 Lupinus albus
Lalb_Chr24g0393751 Lupinus albus
Lj1g0019495 Lotus japonicus
Lj2A53G26 Lonicera japonica
Lj4g0005771 Lotus japonicus
Lj5C708G6 Lonicera japonica
Lsat_1_v5_gn_5_78880 Lactuca sativa
Lsat_1_v5_gn_7_59241 Lactuca sativa
Lsat_1_v5_gn_9_40221 Lactuca sativa
Manes.08G166100 Manihot esculenta
Manes.09G119700 Manihot esculenta
Manes.15G099300 Manihot esculenta
Mapoly0135s0021 Marchantia polymorpha
MBI03_g01481_MAGBIO Magnolia biondii
MBI03_g24009_MAGBIO Magnolia biondii
MBI13_g31562_MAGBIO Magnolia biondii
MBI16_g18200_MAGBIO Magnolia biondii
MCO05G479 Micromonas commoda
MD04G1180800 Malus domestica
MD12G1196100 Malus domestica
MD13G1236200 Malus domestica
MD16G1241200 Malus domestica
Medtr7g074620 Medicago truncatula
Medtr8g101470 Medicago truncatula
MELO3C009088.2 Cucumis melo
MELO3C017389.2 Cucumis melo
Migut.J00823 Erythranthe guttata
Migut.L02046 Erythranthe guttata
MSTRG.18920 Avicennia marina
MSTRG.19389 Avicennia marina
Nitab4.5_0000053g0190 Nicotiana tabacum
Nitab4.5_0000833g0020 Nicotiana tabacum
Nitab4.5_0002139g0050 Nicotiana tabacum
Nitab4.5_0003037g0060 Nicotiana tabacum
Nitab4.5_0009439g0010 Nicotiana tabacum
Nitab4.5_0013611g0010 Nicotiana tabacum
Nitab4.5_0020062g0010 Nicotiana tabacum
Nn5g26732 Nelumbo nucifera
Nn8g41072 Nelumbo nucifera
Oeu011823.1 Olea europaea
Oeu026911.1 Olea europaea
Oeu026915.3 Olea europaea
Oeu027960.3 Olea europaea
Os08g0224800 Oryza sativa ssp. japonica
Os10g0387000 Oryza sativa ssp. japonica
Os11g0123400 Oryza sativa ssp. japonica
Os12g0121300 Oryza sativa ssp. japonica
Peaxi162Scf00315g00815 Petunia axillaris
Peaxi162Scf00366g00026 Petunia axillaris
Peaxi162Scf00374g00622 Petunia axillaris
Peaxi162Scf00889g00228 Petunia axillaris
PGR031G0549 Punica granatum
PGR044G0465 Punica granatum
PGSC0003DMG400013703 Solanum tuberosum
PGSC0003DMG400020688 Solanum tuberosum
Phvul.002G303400 Phaseolus vulgaris
Phvul.008G077100 Phaseolus vulgaris
Potri.006G071000 Populus trichocarpa
Potri.006G113900 Populus trichocarpa
Potri.016G143600 Populus trichocarpa
Potri.018G132700 Populus trichocarpa
Pp3c14_11650 Physcomitrium patens
Pp3c14_11740 Physcomitrium patens
Pp3c17_7100 Physcomitrium patens
Pp3c17_7160 Physcomitrium patens
PRCOL_00000701 Prasinoderma coloniale
Prupe.1G067900 Prunus persica
Prupe.6G300600 Prunus persica
Psat3g116800 Pisum sativum
Psat7g021480 Pisum sativum
PSO063G2128 Papaver somniferum
PSO170G5278 Papaver somniferum
PSO339G5436 Papaver somniferum
PSO384G2806 Papaver somniferum
QL07p030298 Quercus lobata
QL07p030692 Quercus lobata
QL11p009445 Quercus lobata
RcHm_v2.0_Chr3g0459321 Rosa chinensis
RcHm_v2.0_Chr4g0398251 Rosa chinensis
Rhsim01G0113300 Rhododendron simsii
Rhsim04G0119500 Rhododendron simsii
Sabra04G0159500 Salix brachista
Sabra06G0052900 Salix brachista
Sabra06G0088800 Salix brachista
Sabra18G0112400 Salix brachista
SalBow6G3390 Salvia bowleyana
Sc02g0000090 Simmondsia chinensis
Sed0004992 Sechium edule
Sed0006540 Sechium edule
Sed0025067 Sechium edule
SEGI_16482 Sequoiadendron giganteum
SEGI_27582 Sequoiadendron giganteum
SEGI_38858 Sequoiadendron giganteum
SGA_v2.0_scaffold240G44056 Striga asiatica
SMO365G0037 Selaginella moellendorffii
Solyc05g046300.3 Solanum lycopersicum
Solyc07g009490.3 Solanum lycopersicum
Solyc10g074700.2 Solanum lycopersicum
Sopen00g006200 Solanum pennellii
Sopen00g010760 Solanum pennellii
Sopen05g027590 Solanum pennellii
Sopen07g005280 Solanum pennellii
Sopen10g027190 Solanum pennellii
Sp4g21010 Schrenkiella parvula
TAR369G0177 Trochodendron aralioides
TAR636G1587 Trochodendron aralioides
THA.LOC104823342 Tarenaya hassleriana
Thecc.09G189300 Theobroma cacao
Thhalv10016709m.g Eutrema salsugineum
TPR.G20508 Trifolium pratense
TPR.G25447 Trifolium pratense
TPR.G3186 Trifolium pratense
TPR.G7679 Trifolium pratense
TPR.G856 Trifolium pratense
TWI53G0144 Tripterygium wilfordii
TWI74G0851 Tripterygium wilfordii
unitig_0.g2549 Utricularia gibba
unitig_22.g6569 Utricularia gibba
vmacro08963 Vaccinium macrocarpon
vmacro20794 Vaccinium macrocarpon
VMungo0251G3592 Vigna mungo
VMungo1383G3687 Vigna mungo
Zm00001eb093730 Zea mays
Zm00001eb195630 Zea mays
Zm00001eb414050 Zea mays

User provided reference genes

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