Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p20680 Brassica napus
A07p06310 Brassica napus
A08p04070 Brassica napus
A09p10910 Brassica napus
Aa31LG10G4620 Aethionema arabicum
Aa31LG1G17720 Aethionema arabicum
Aa31LG1G17730 Aethionema arabicum
Aa31LG1G17740 Aethionema arabicum
Aa31LG8G13580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2378 Anthoceros agrestis
Actinidia05290 Actinidia chinensis
AL1G56290 Arabidopsis lyrata
AL3G52250 Arabidopsis lyrata
Aqoxy4G02864 Aquilegia oxysepala
Aqoxy4G02866 Aquilegia oxysepala
Aqoxy4G02924 Aquilegia oxysepala
Aqoxy6G01069 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2W0JFY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MV7ZA0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RAU5A9 Arachis hypogaea
AT1G49330 Arabidopsis thaliana
AT2G16190 Arabidopsis thaliana
ATR0598G030 Amborella trichopoda
Atru.chr2.3458 Acer truncatum
Atru.chr2.3462 Acer truncatum
Atru.chr2.3469 Acer truncatum
Atru.chr2.3474 Acer truncatum
Atru.chr2.3476 Acer truncatum
Atru.chr8.2487 Acer truncatum
BcaB02g11070 Brassica carinata
BcaB04g17348 Brassica carinata
BcaB07g31778 Brassica carinata
BcaB07g33679 Brassica carinata
BcaC04g23034 Brassica carinata
BcaC05g27515 Brassica carinata
BcaC05g28516 Brassica carinata
BcaC07g37059 Brassica carinata
BcaC07g37060 Brassica carinata
BcaC07g37061 Brassica carinata
BcaC07g37062 Brassica carinata
BcaC07g37063 Brassica carinata
BcaC07g37064 Brassica carinata
BcaC08g43132 Brassica carinata
BolC5t32214H Brassica oleracea
BolC6t35539H Brassica oleracea
BolC8t47228H Brassica oleracea
BolC8t47229H Brassica oleracea
BolC9t54177H Brassica oleracea
BraA05t20976Z Brassica rapa
BraA08t32433Z Brassica rapa
BraA09t36731Z Brassica rapa
C05p34890 Brassica napus
C06p04070 Brassica napus
C08p04250 Brassica napus
C08p04260 Brassica napus
C09p12880 Brassica napus
CAN.G220.51 Capsicum annuum
CANSAT56G0112 Cannabis sativa
CANSAT56G0427 Cannabis sativa
CANSAT56G1540 Cannabis sativa
CANSAT56G1636 Cannabis sativa
CANSAT56G3528 Cannabis sativa
CARHR039320 Cardamine hirsuta
CARHR106440 Cardamine hirsuta
Carub.0001s3563 Capsella rubella
Carub.0001s3583 Capsella rubella
Carub.0001s3851 Capsella rubella
Cc02_g17770 Coffea canephora
Cc03_g12320 Coffea canephora
Cfa005023 Carpinus fangiana
Cfa017447 Carpinus fangiana
Cfa017448 Carpinus fangiana
Ciclev10012452m.g Citrus clementina
Ciclev10030108m.g Citrus clementina
CiPaw.05G062300 Carya illinoinensis
CiPaw.05G062400 Carya illinoinensis
CiPaw.05G062500 Carya illinoinensis
CiPaw.06G136900 Carya illinoinensis
CiPaw.10G150500 Carya illinoinensis
ClCG02G005160 Citrullus lanatus
COL.COLO4_09162 Corchorus olitorius
COL.COLO4_09163 Corchorus olitorius
COL.COLO4_32442 Corchorus olitorius
Cpa.g.sc62.127 Carica papaya
CsaV3_3G014490 Cucumis sativus L.
CsaV3_5G020520 Cucumis sativus L.
CsaV3_7G023420 Cucumis sativus L.
CSS0003374 Camellia sinensis var. sinensis
CSS0029133 Camellia sinensis var. sinensis
DCAR_003101 Daucus carota
DCAR_003102 Daucus carota
DCAR_003103 Daucus carota
DCAR_017838 Daucus carota
DCAR_025315 Daucus carota
Dinv23544 Davidia involucrata
Duzib093G1569 Durio zibethinus
Duzib128G0044 Durio zibethinus
Duzib128G1183 Durio zibethinus
Duzib132G0803 Durio zibethinus
Duzib248G0736 Durio zibethinus
ECA248G3384 Erigeron canadensis
EL10Ac6g15484 Beta vulgaris
Eucgr.I01256 Eucalyptus grandis
FAN04G2530 Fragaria x ananassa
FAN08G2389 Fragaria x ananassa
FAN11G1016 Fragaria x ananassa
FAN15G0633 Fragaria x ananassa
FAN24G2405 Fragaria x ananassa
FAN27G3171 Fragaria x ananassa
FvH4_1g24220 Fragaria vesca
FvH4_2g08460 Fragaria vesca
Glyma.04G013600 Glycine max
Glyma.06G013500 Glycine max
Glyma.09G034000 Glycine max
Glyma.13G202900 Glycine max
Glyma.13G210100 Glycine max
Glyma.13G210200 Glycine max
Glyma.15G102700 Glycine max
Glyma.15G175900 Glycine max
Gohir.A03G179450 Gossypium hirsutum
Gohir.A04G078900 Gossypium hirsutum
Gohir.A04G116900 Gossypium hirsutum
Gohir.D02G202876 Gossypium hirsutum
Gohir.D04G118050 Gossypium hirsutum
Gohir.D04G118100 Gossypium hirsutum
Gohir.D04G158500 Gossypium hirsutum
Gorai.005G228300 Gossypium raimondii
Gorai.009G423100 Gossypium raimondii
Gorai.009G423200 Gossypium raimondii
Gorai.012G146000 Gossypium raimondii
GSVIVG01025599001 Vitis vinifera
HanXRQChr01g0011521 Helianthus annuus
HanXRQChr16g0504961 Helianthus annuus
Haze_02364 Corylus avellana
Haze_20712 Corylus avellana
Haze_20713 Corylus avellana
Hma1.2p1_0066F.1_g036630 Hydrangea macrophylla
Hma1.2p1_1375F.1_g278960 Hydrangea macrophylla
Hma1.2p1_3179F.1_g333700 Hydrangea macrophylla
HPP92_019507 Vanilla planifolia
HPP92_019508 Vanilla planifolia
Lalb_Chr00c44g0412581 Lupinus albus
Lalb_Chr01g0019161 Lupinus albus
Lalb_Chr08g0246571 Lupinus albus
Lalb_Chr11g0075521 Lupinus albus
Lalb_Chr11g0075531 Lupinus albus
Lalb_Chr20g0113131 Lupinus albus
Lalb_Chr20g0113141 Lupinus albus
Lalb_Chr25g0289421 Lupinus albus
Lj1g0004120 Lotus japonicus
Lj2C101G11 Lonicera japonica
Lj5P199T19 Lonicera japonica
Lsat_1_v5_gn_5_173521 Lactuca sativa
Lsat_1_v5_gn_7_89640 Lactuca sativa
Manes.15G164900 Manihot esculenta
Manes.17G099600 Manihot esculenta
Manes.18G080400 Manihot esculenta
Manes.18G081000 Manihot esculenta
Mapoly0024s0040 Marchantia polymorpha
MBI15_g28964_MAGBIO Magnolia biondii
MBI15_g42196_MAGBIO Magnolia biondii
MBI16_g26982_MAGBIO Magnolia biondii
MBI16_g36977_MAGBIO Magnolia biondii
MBI16_g37704_MAGBIO Magnolia biondii
MD04G1118400 Malus domestica
MD10G1078300 Malus domestica
Medtr2g009590 Medicago truncatula
Medtr2g048520 Medicago truncatula
Medtr2g048570 Medicago truncatula
Medtr3g116470 Medicago truncatula
Medtr3g462610 Medicago truncatula
Medtr3g462630 Medicago truncatula
Medtr4g029310 Medicago truncatula
Medtr4g075080 Medicago truncatula
Medtr7g098810 Medicago truncatula
Medtr7g098850 Medicago truncatula
Medtr7g099230 Medicago truncatula
Medtr7g100322 Medicago truncatula
Medtr7g100325 Medicago truncatula
Medtr7g100470 Medicago truncatula
MELO3C012543.2 Cucumis melo
MELO3C033918.2 Cucumis melo
Migut.J00381 Erythranthe guttata
Migut.N01229 Erythranthe guttata
Nitab4.5_0000336g0060 Nicotiana tabacum
Nitab4.5_0000643g0020 Nicotiana tabacum
Nitab4.5_0003168g0030 Nicotiana tabacum
Nitab4.5_0008047g0040 Nicotiana tabacum
Nitab4.5_0009752g0010 Nicotiana tabacum
Nn1g04184 Nelumbo nucifera
Nn2g12422 Nelumbo nucifera
Nn5g29553 Nelumbo nucifera
Nn7g38341 Nelumbo nucifera
Oeu029119.1 Olea europaea
Os01g0693100 Oryza sativa ssp. japonica
Os05g0549300 Oryza sativa ssp. japonica
Os05g0549500 Oryza sativa ssp. japonica
Os12g0236600 Oryza sativa ssp. japonica
Peaxi162Scf00039g00064 Petunia axillaris
Peaxi162Scf00602g00055 Petunia axillaris
Peaxi162Scf00684g00045 Petunia axillaris
PGR004G0762 Punica granatum
PGR004G1985 Punica granatum
PGR004G2759 Punica granatum
PGSC0003DMG400012319 Solanum tuberosum
Phvul.006G119300 Phaseolus vulgaris
Phvul.006G155100 Phaseolus vulgaris
Phvul.009G009300 Phaseolus vulgaris
Potri.004G152600 Populus trichocarpa
Potri.009G113900 Populus trichocarpa
Potri.016G080300 Populus trichocarpa
Pp3c11_17610 Physcomitrium patens
Pp3c7_11350 Physcomitrium patens
Prupe.6G247500 Prunus persica
Prupe.6G247600 Prunus persica
Prupe.6G247700 Prunus persica
Prupe.8G100200 Prunus persica
Psat0s178g0200 Pisum sativum
Psat3g044480 Pisum sativum
Psat3g046080 Pisum sativum
Psat5g006760 Pisum sativum
Psat5g007880 Pisum sativum
PSO063G4076 Papaver somniferum
PSO170G1651 Papaver somniferum
PSO541G5759 Papaver somniferum
PSO675G6360 Papaver somniferum
QL11p039093 Quercus lobata
QL11p043056 Quercus lobata
RcHm_v2.0_Chr3g0467741 Rosa chinensis
RcHm_v2.0_Chr6g0263791 Rosa chinensis
Rhsim11G0174500 Rhododendron simsii
Sabra04G0101200 Salix brachista
Sabra09G0087400 Salix brachista
Sabra16G0088300 Salix brachista
SalBow3G3741 Salvia bowleyana
SalBow3G4320 Salvia bowleyana
Sc08g0000390 Simmondsia chinensis
Sc08g0000400 Simmondsia chinensis
Sed0003953 Sechium edule
Sed0004265 Sechium edule
Sed0010898 Sechium edule
Sed0015323 Sechium edule
Sed0022905 Sechium edule
SGA_v2.0_scaffold13G06560 Striga asiatica
SHI05423 Sapria himalayana
SMO119G0507 Selaginella moellendorffii
SMO147G0316 Selaginella moellendorffii
Solyc08g081600.1 Solanum lycopersicum
Solyc09g005790.1 Solanum lycopersicum
Solyc09g090450.1 Solanum lycopersicum
Sp1g40170 Schrenkiella parvula
SpUn0227_0010 Schrenkiella parvula
TAR376G1049 Trochodendron aralioides
TAR381G1013 Trochodendron aralioides
TAR381G1210 Trochodendron aralioides
TAR381G1213 Trochodendron aralioides
TAR628G0203 Trochodendron aralioides
TAR628G1013 Trochodendron aralioides
THA.LOC104798812 Tarenaya hassleriana
THA.LOC104804357 Tarenaya hassleriana
THA.LOC104804728 Tarenaya hassleriana
THA.LOC104805442 Tarenaya hassleriana
Thecc.02G123700 Theobroma cacao
Thecc.05G046800 Theobroma cacao
Thecc.05G046900 Theobroma cacao
Thhalv10012209m.g Eutrema salsugineum
Thhalv10023072m.g Eutrema salsugineum
TPR.G14693 Trifolium pratense
TPR.G21447 Trifolium pratense
TPR.G32033 Trifolium pratense
TPR.G36887 Trifolium pratense
TPR.G38215 Trifolium pratense
TWI31G1363 Tripterygium wilfordii
TWI79G0671 Tripterygium wilfordii
unitig_8.g3571 Utricularia gibba
VMungo0540G0113 Vigna mungo
VMungo0540G2216 Vigna mungo
VMungo1309G0414 Vigna mungo
VMungo1309G0479 Vigna mungo
VMungo1309G1174 Vigna mungo
VMungo1309G2822 Vigna mungo
Zm00001eb294770 Zea mays
Zm00001eb342760 Zea mays
Zm00001eb360730 Zea mays

User provided reference genes

Program Settings