Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p20360 Brassica napus
A06p03390 Brassica napus
A08p03380 Brassica napus
Aa31LG10G4090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1459 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5412 Anthoceros agrestis
Actinidia00351 Actinidia chinensis
Actinidia02446 Actinidia chinensis
Actinidia17531 Actinidia chinensis
Actinidia17534 Actinidia chinensis
Actinidia33964 Actinidia chinensis
Actinidia35621 Actinidia chinensis
Ah.01g024560 Amaranthus hybridus
AL1G57600 Arabidopsis lyrata
Aqoxy6G01518 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3J1H0B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NYP183 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UC42H8 Arachis hypogaea
AT1G50030 Arabidopsis thaliana
ATR0753G079 Amborella trichopoda
Atru.chr4.144 Acer truncatum
Atru.chr4.153 Acer truncatum
Atru.chr4.155 Acer truncatum
Atru.chr5.2257 Acer truncatum
Atru.chr5.2258 Acer truncatum
Atru.chr5.2259 Acer truncatum
AUR62027030 Chenopodium quinoa
AUR62030874 Chenopodium quinoa
BcaB02g11120 Brassica carinata
BcaB02g11121 Brassica carinata
BcaB02g11124 Brassica carinata
BcaB02g11126 Brassica carinata
BcaB07g33455 Brassica carinata
BcaC05g27452 Brassica carinata
BcaC06g33074 Brassica carinata
BcaC08g43183 Brassica carinata
BolC3t21258H Brassica oleracea
BolC5t32146H Brassica oleracea
BolC6t35612H Brassica oleracea
BraA05t20943Z Brassica rapa
BraA06t23548Z Brassica rapa
BraA08t32370Z Brassica rapa
C05p34110 Brassica napus
C06p04900 Brassica napus
CAN.G10698.1 Capsicum annuum
CAN.G1164.1 Capsicum annuum
CAN.G1164.4 Capsicum annuum
CAN.G12816.1 Capsicum annuum
CAN.G1627.3 Capsicum annuum
CAN.G1627.7 Capsicum annuum
CAN.G289.58 Capsicum annuum
CAN.G289.59 Capsicum annuum
CAN.G411.101 Capsicum annuum
CAN.G411.104 Capsicum annuum
CAN.G411.107 Capsicum annuum
CAN.G411.96 Capsicum annuum
CAN.G606.78 Capsicum annuum
CAN.G606.79 Capsicum annuum
CAN.G9920.1 Capsicum annuum
CANSAT25G3449 Cannabis sativa
CANSAT56G3908 Cannabis sativa
CARHR040140 Cardamine hirsuta
Carub.0001s3921 Capsella rubella
Ca_24363_v3 Cicer arietinum L.
CBR_g11104 Chara braunii
CBR_g23926 Chara braunii
CBR_g3294 Chara braunii
CBR_g49725 Chara braunii
Cc02_g20160 Coffea canephora
Cc02_g20170 Coffea canephora
CDE04G3197 Ceratophyllum demersum
CDE06G0012 Ceratophyllum demersum
CDE06G2212 Ceratophyllum demersum
CDE06G2553 Ceratophyllum demersum
Cfa026368 Carpinus fangiana
Ciclev10027661m.g Citrus clementina
CiPaw.05G021600 Carya illinoinensis
CiPaw.06G163300 Carya illinoinensis
ClCG02G007160 Citrullus lanatus
COL.COLO4_32473 Corchorus olitorius
Cpa.g.sc106.24 Carica papaya
Cpa.g.sc1108.2 Carica papaya
Cpa.g.sc1108.3 Carica papaya
Cpa.g.sc520.1 Carica papaya
Cpa.g.sc520.2 Carica papaya
Cre09.g397327 Chlamydomonas reinhardtii
Cre09.g400553 Chlamydomonas reinhardtii
CsaV3_7G007670 Cucumis sativus L.
CSS0002620 Camellia sinensis var. sinensis
CSS0005224 Camellia sinensis var. sinensis
CSS0013695 Camellia sinensis var. sinensis
CSS0014690 Camellia sinensis var. sinensis
CSS0020690 Camellia sinensis var. sinensis
CSS0024075 Camellia sinensis var. sinensis
CSS0026275 Camellia sinensis var. sinensis
CSS0028039 Camellia sinensis var. sinensis
CSS0047603 Camellia sinensis var. sinensis
DCAR_003604 Daucus carota
DCAR_021938 Daucus carota
Dinv09531 Davidia involucrata
Duzib132G1084 Durio zibethinus
ECA232G2594 Erigeron canadensis
EL10Ac5g12235 Beta vulgaris
EL10Ac9g22169 Beta vulgaris
Eucgr.C04378 Eucalyptus grandis
Eucgr.I02503 Eucalyptus grandis
Eucgr.I02504 Eucalyptus grandis
FAN05G1179 Fragaria x ananassa
FAN06G3465 Fragaria x ananassa
FAN09G2537 Fragaria x ananassa
FAN15G0843 Fragaria x ananassa
FAN15G3522 Fragaria x ananassa
FAN19G0815 Fragaria x ananassa
FAN20G0378 Fragaria x ananassa
FAN20G2522 Fragaria x ananassa
FAN24G1227 Fragaria x ananassa
FAN24G2034 Fragaria x ananassa
FAN25G3390 Fragaria x ananassa
FAN27G1380 Fragaria x ananassa
FvH4_2g03080 Fragaria vesca
FvH4_2g06710 Fragaria vesca
Glyma.01G241300 Glycine max
Glyma.09G081460 Glycine max
Glyma.11G002600 Glycine max
Gohir.A01G009500 Gossypium hirsutum
Gohir.A01G009566 Gossypium hirsutum
Gohir.A12G018200 Gossypium hirsutum
Gohir.D01G009100 Gossypium hirsutum
Gohir.D03G113550 Gossypium hirsutum
Gohir.D12G018800 Gossypium hirsutum
Gorai.002G011200 Gossypium raimondii
Gorai.008G019100 Gossypium raimondii
GSVIVG01037040001 Vitis vinifera
HanXRQChr04g0107251 Helianthus annuus
HanXRQChr04g0107281 Helianthus annuus
Haze_04619 Corylus avellana
Haze_10283 Corylus avellana
Haze_10317 Corylus avellana
Haze_10318 Corylus avellana
Haze_10320 Corylus avellana
Haze_10321 Corylus avellana
Haze_10322 Corylus avellana
Haze_10737 Corylus avellana
Haze_13450 Corylus avellana
Haze_13568 Corylus avellana
Haze_16272 Corylus avellana
Haze_16326 Corylus avellana
Haze_19839 Corylus avellana
Haze_21810 Corylus avellana
Haze_23585 Corylus avellana
Haze_25329 Corylus avellana
Haze_26242 Corylus avellana
Hma1.2p1_0661F.1_g197980 Hydrangea macrophylla
Hma1.2p1_0661F.1_g197990 Hydrangea macrophylla
Hma1.2p1_0661F.1_g198000 Hydrangea macrophylla
Hma1.2p1_1051F.1_g252210 Hydrangea macrophylla
Hma1.2p1_1758F.1_g301190 Hydrangea macrophylla
Hma1.2p1_1758F.1_g301200 Hydrangea macrophylla
HPP92_016412 Vanilla planifolia
Hund06505 Selenicereus undatus
Lalb_Chr05g0210831 Lupinus albus
Lalb_Chr16g0376321 Lupinus albus
Lalb_Chr16g0376331 Lupinus albus
Lj1g0008728 Lotus japonicus
Lj5C222G6 Lonicera japonica
Lsat_1_v5_gn_1_100941 Lactuca sativa
Lsat_1_v5_gn_3_108880 Lactuca sativa
Lsat_1_v5_gn_3_135700 Lactuca sativa
Lsat_1_v5_gn_4_143680 Lactuca sativa
Lsat_1_v5_gn_4_79581 Lactuca sativa
Lsat_1_v5_gn_5_137761 Lactuca sativa
Lsat_1_v5_gn_9_63081 Lactuca sativa
Manes.07G052645 Manihot esculenta
Manes.07G052660 Manihot esculenta
Mapoly0047s0119 Marchantia polymorpha
Mapoly0069s0061 Marchantia polymorpha
MBI03_g18482_MAGBIO Magnolia biondii
MBI03_g18483_MAGBIO Magnolia biondii
MBI04_g22054_MAGBIO Magnolia biondii
MBI04_g33444_MAGBIO Magnolia biondii
MBI11_g39916_MAGBIO Magnolia biondii
MBI18_g33401_MAGBIO Magnolia biondii
MBI19_g03781_MAGBIO Magnolia biondii
MBI19_g04965_MAGBIO Magnolia biondii
MBI19_g14019_MAGBIO Magnolia biondii
MCO06G142 Micromonas commoda
MCO15G108 Micromonas commoda
MD00G1031100 Malus domestica
MD05G1107800 Malus domestica
MD10G1112000 Malus domestica
MD15G1045400 Malus domestica
Medtr5g005380 Medicago truncatula
MELO3C016143.2 Cucumis melo
MELO3C018533.2 Cucumis melo
MELO3C031102.2 Cucumis melo
MELO3C031895.2 Cucumis melo
Migut.B00477 Erythranthe guttata
MSTRG.16667 Avicennia marina
Nitab4.5_0000772g0070 Nicotiana tabacum
Nitab4.5_0010974g0020 Nicotiana tabacum
Nn5g30713 Nelumbo nucifera
Oeu025303.1 Olea europaea
Oeu025304.1 Olea europaea
Oeu028915.2 Olea europaea
Os05g0235300 Oryza sativa ssp. japonica
Peaxi162Scf00016g03243 Petunia axillaris
PGR142G4285 Punica granatum
PGSC0003DMG400001056 Solanum tuberosum
PGSC0003DMG400004174 Solanum tuberosum
PGSC0003DMG400004176 Solanum tuberosum
PGSC0003DMG400004177 Solanum tuberosum
PGSC0003DMG400004508 Solanum tuberosum
PGSC0003DMG400005433 Solanum tuberosum
PGSC0003DMG400007452 Solanum tuberosum
PGSC0003DMG400008758 Solanum tuberosum
PGSC0003DMG401025733 Solanum tuberosum
Phvul.002G049900 Phaseolus vulgaris
Potri.001G289200 Populus trichocarpa
Potri.009G084500 Populus trichocarpa
Pp3c6_4910 Physcomitrium patens
Pp3c9_15240 Physcomitrium patens
PRCOL_00002418 Prasinoderma coloniale
PRCOL_00006012 Prasinoderma coloniale
Prupe.8G151300 Prunus persica
Psat0ss777g0080 Pisum sativum
Psat0ss9382g0120 Pisum sativum
Psat3g066680 Pisum sativum
Psat4g173440 Pisum sativum
Psat4g228960 Pisum sativum
Psat4g229000 Pisum sativum
PSO541G1630 Papaver somniferum
PSO675G3080 Papaver somniferum
PSO675G4735 Papaver somniferum
PSO732G0082 Papaver somniferum
QL05p028983 Quercus lobata
QL06p036987 Quercus lobata
QL11p028985 Quercus lobata
QL11p029016 Quercus lobata
QL11p029030 Quercus lobata
RcHm_v2.0_Chr6g0247951 Rosa chinensis
Rhsim11G0149700 Rhododendron simsii
Sabra09G0065200 Salix brachista
Sabra16G0181000 Salix brachista
SalBow6G1889 Salvia bowleyana
SalBow6G7047 Salvia bowleyana
Sc18g0007320 Simmondsia chinensis
Sed0018886 Sechium edule
SEGI_00024 Sequoiadendron giganteum
SEGI_04689 Sequoiadendron giganteum
SEGI_05324 Sequoiadendron giganteum
SEGI_07133 Sequoiadendron giganteum
SEGI_12344 Sequoiadendron giganteum
SEGI_17280 Sequoiadendron giganteum
SEGI_17946 Sequoiadendron giganteum
SEGI_21899 Sequoiadendron giganteum
SEGI_30166 Sequoiadendron giganteum
SEGI_32787 Sequoiadendron giganteum
SEGI_34966 Sequoiadendron giganteum
SGA_v2.0_scaffold32G12979 Striga asiatica
SGA_v2.0_scaffold519G52682 Striga asiatica
SHI03324 Sapria himalayana
SMO147G0225 Selaginella moellendorffii
SMO351G0307 Selaginella moellendorffii
Solyc01g106770.4 Solanum lycopersicum
Solyc01g106840.2 Solanum lycopersicum
Solyc01g106860.4 Solanum lycopersicum
Sopen01g049080 Solanum pennellii
Sp1g36890 Schrenkiella parvula
TAR381G0014 Trochodendron aralioides
TAR381G0773 Trochodendron aralioides
TAR625G0605 Trochodendron aralioides
TAR625G0640 Trochodendron aralioides
THA.LOC104826500 Tarenaya hassleriana
Thecc.01G281900 Theobroma cacao
Thecc.02G120900 Theobroma cacao
Thecc.06G048300 Theobroma cacao
Thecc.08G169400 Theobroma cacao
Thhalv10011174m.g Eutrema salsugineum
Thhalv10012207m.g Eutrema salsugineum
TPR.G8287 Trifolium pratense
TPR.G8301 Trifolium pratense
TWI59G1328 Tripterygium wilfordii
unitig_60.g25464 Utricularia gibba
vmacro01937 Vaccinium macrocarpon
vmacro01938 Vaccinium macrocarpon
VMungo1215G1081 Vigna mungo
Zm00001eb285840 Zea mays

User provided reference genes

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