Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p42530 Brassica napus
A06p42540 Brassica napus
A08p32370 Brassica napus
A09p24990 Brassica napus
A09p25010 Brassica napus
Aa31LG2G6570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.988 Anthoceros agrestis
Actinidia15866 Actinidia chinensis
Actinidia16622 Actinidia chinensis
Actinidia18123 Actinidia chinensis
Ah.16g101930 Amaranthus hybridus
AL1G24992 Arabidopsis lyrata
AL5G14330 Arabidopsis lyrata
AL5G14340 Arabidopsis lyrata
AL5G14350 Arabidopsis lyrata
Aqoxy3G00369 Aquilegia oxysepala
Aqoxy4G00281 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.25V5XE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7243UF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9D0TAX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F4N1WH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FBA9Q8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FSAK9D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H5H05M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V2FEV8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YUG4Q7 Arachis hypogaea
AT1G13280 Arabidopsis thaliana
AT3G25760 Arabidopsis thaliana
AT3G25770 Arabidopsis thaliana
AT3G25780 Arabidopsis thaliana
ATR0739G193 Amborella trichopoda
Atru.chr11.1345 Acer truncatum
Atru.chr8.833 Acer truncatum
AUR62002918 Chenopodium quinoa
AUR62008963 Chenopodium quinoa
AUR62012155 Chenopodium quinoa
AUR62012156 Chenopodium quinoa
AUR62014540 Chenopodium quinoa
AUR62035277 Chenopodium quinoa
BcaB07g30633 Brassica carinata
BcaC04g21419 Brassica carinata
BcaC04g21421 Brassica carinata
BcaC06g31119 Brassica carinata
BcaC06g33958 Brassica carinata
BcaC06g33959 Brassica carinata
BcaNung02580 Brassica carinata
BolC7t43996H Brassica oleracea
BolC7t43997H Brassica oleracea
BolC7t43999H Brassica oleracea
BolC8t49228H Brassica oleracea
BolC9t56052H Brassica oleracea
BolC9t56054H Brassica oleracea
BraA06t27168Z Brassica rapa
BraA06t27169Z Brassica rapa
BraA08t35160Z Brassica rapa
BraA09t38087Z Brassica rapa
BraA09t38089Z Brassica rapa
C07p34630 Brassica napus
C07p34640 Brassica napus
C07p34670 Brassica napus
C08p16060 Brassica napus
C09p31980 Brassica napus
C09p32000 Brassica napus
CAN.G358.136 Capsicum annuum
CANSAT64G0668 Cannabis sativa
CANSAT64G2659 Cannabis sativa
CANSAT64G2850 Cannabis sativa
CARHR013660 Cardamine hirsuta
CARHR146670 Cardamine hirsuta
CARHR146680 Cardamine hirsuta
Carub.0001s1301 Capsella rubella
Carub.0005s0359 Capsella rubella
Carub.0005s0360 Capsella rubella
Carub.0005s0361 Capsella rubella
Ca_21718_v3 Cicer arietinum L.
Ca_27889_v3 Cicer arietinum L.
Cc07_g09040 Coffea canephora
Cc11_g10540 Coffea canephora
CDE02G2706 Ceratophyllum demersum
CDE08G0665 Ceratophyllum demersum
Cfa007947 Carpinus fangiana
Cfa007948 Carpinus fangiana
Cfa007949 Carpinus fangiana
Cfa018623 Carpinus fangiana
Ciclev10012528m.g Citrus clementina
Ciclev10012552m.g Citrus clementina
Ciclev10032510m.g Citrus clementina
CiPaw.03G059400 Carya illinoinensis
CiPaw.03G059500 Carya illinoinensis
CiPaw.04G040300 Carya illinoinensis
ClCG03G009670 Citrullus lanatus
ClCG11G005370 Citrullus lanatus
COL.COLO4_16193 Corchorus olitorius
Cpa.g.sc179.27 Carica papaya
CsaV3_5G023060 Cucumis sativus L.
CsaV3_5G039150 Cucumis sativus L.
CSS0006857 Camellia sinensis var. sinensis
CSS0011026 Camellia sinensis var. sinensis
CSS0032924 Camellia sinensis var. sinensis
CSS0034810 Camellia sinensis var. sinensis
CSS0044486 Camellia sinensis var. sinensis
DCAR_015379 Daucus carota
DCAR_017219 Daucus carota
DCAR_025939 Daucus carota
Dinv21126 Davidia involucrata
Dinv33928 Davidia involucrata
Dinv34850 Davidia involucrata
Dinv34851 Davidia involucrata
Duzib133G0585 Durio zibethinus
Duzib251G0671 Durio zibethinus
Duzib268G0360 Durio zibethinus
Duzib268G0546 Durio zibethinus
ECA232G0574 Erigeron canadensis
ECA232G2113 Erigeron canadensis
ECA232G4637 Erigeron canadensis
EL10Ac2g04608 Beta vulgaris
Eucgr.F02479 Eucalyptus grandis
FAN01G1904 Fragaria x ananassa
FAN02G2236 Fragaria x ananassa
FAN05G1604 Fragaria x ananassa
FAN08G1304 Fragaria x ananassa
FAN09G3164 Fragaria x ananassa
FAN13G0635 Fragaria x ananassa
FAN14G0498 Fragaria x ananassa
FAN18G1543 Fragaria x ananassa
FvH4_4g28021 Fragaria vesca
FvH4_5g31510 Fragaria vesca
FvH4_6g45370 Fragaria vesca
Glyma.01G086900 Glycine max
Glyma.02G099200 Glycine max
Glyma.08G256600 Glycine max
Glyma.13G047300 Glycine max
Glyma.18G280900 Glycine max
Glyma.19G044900 Glycine max
Gohir.A08G036200 Gossypium hirsutum
Gohir.A08G036300 Gossypium hirsutum
Gohir.A08G036400 Gossypium hirsutum
Gohir.A08G036500 Gossypium hirsutum
Gohir.A12G169800 Gossypium hirsutum
Gohir.D08G046900 Gossypium hirsutum
Gohir.D08G047000 Gossypium hirsutum
Gohir.D08G047100 Gossypium hirsutum
Gohir.D08G047200 Gossypium hirsutum
Gohir.D12G173100 Gossypium hirsutum
Gorai.004G046100 Gossypium raimondii
Gorai.004G046200 Gossypium raimondii
Gorai.004G046300 Gossypium raimondii
Gorai.004G046400 Gossypium raimondii
Gorai.008G185600 Gossypium raimondii
GSVIVG01011944001 Vitis vinifera
GSVIVG01036445001 Vitis vinifera
HanXRQChr11g0324951 Helianthus annuus
HanXRQChr14g0438661 Helianthus annuus
HanXRQChr15g0483011 Helianthus annuus
Haze_14126 Corylus avellana
Haze_14127 Corylus avellana
Hma1.2p1_0261F.1_g104950 Hydrangea macrophylla
Hma1.2p1_0261F.1_g104960 Hydrangea macrophylla
Hma1.2p1_0550F.1_g177240 Hydrangea macrophylla
Hma1.2p1_0862F.1_g229930 Hydrangea macrophylla
HPP92_023083 Vanilla planifolia
Hund05763 Selenicereus undatus
Hund25098 Selenicereus undatus
Hund25099 Selenicereus undatus
Lalb_Chr02g0158321 Lupinus albus
Lalb_Chr06g0174691 Lupinus albus
Lalb_Chr10g0092261 Lupinus albus
Lalb_Chr10g0099791 Lupinus albus
Lalb_Chr11g0062581 Lupinus albus
Lalb_Chr17g0336501 Lupinus albus
Lj1g0006170 Lotus japonicus
Lj1g0014632 Lotus japonicus
Lj2g0015653 Lotus japonicus
Lj2g0024202 Lotus japonicus
Lj3P1019T19 Lonicera japonica
Lj4A195T60 Lonicera japonica
Lsat_1_v5_gn_4_153121 Lactuca sativa
Manes.01G108000 Manihot esculenta
Manes.02G066600 Manihot esculenta
Manes.14G098200 Manihot esculenta
Mapoly0057s0049 Marchantia polymorpha
MBI09_g40287_MAGBIO Magnolia biondii
MBI16_g25112_MAGBIO Magnolia biondii
MD04G1210800 Malus domestica
MD09G1084600 Malus domestica
MD12G1225100 Malus domestica
MD13G1045900 Malus domestica
MD16G1047500 Malus domestica
Medtr4g069020 Medicago truncatula
Medtr5g053950 Medicago truncatula
Medtr6g017155 Medicago truncatula
Medtr6g017165 Medicago truncatula
Medtr7g417750 Medicago truncatula
Medtr8g062760 Medicago truncatula
MELO3C003015.2 Cucumis melo
MELO3C022090.2 Cucumis melo
Migut.E00308 Erythranthe guttata
Migut.E00309 Erythranthe guttata
Migut.H00198 Erythranthe guttata
MSTRG.2257 Avicennia marina
MSTRG.23559 Avicennia marina
MSTRG.3577 Avicennia marina
Nitab4.5_0004118g0110 Nicotiana tabacum
Nitab4.5_0007287g0040 Nicotiana tabacum
Nn4g23743 Nelumbo nucifera
Oeu030756.1 Olea europaea
Oeu042036.1 Olea europaea
Os03g0438100 Oryza sativa ssp. japonica
Peaxi162Scf01327g00134 Petunia axillaris
Peaxi162Scf01955g00005 Petunia axillaris
PGR004G2613 Punica granatum
PGR102G3225 Punica granatum
PGSC0003DMG401012679 Solanum tuberosum
Phvul.003G111500 Phaseolus vulgaris
Phvul.004G072000 Phaseolus vulgaris
Phvul.008G020200 Phaseolus vulgaris
Potri.004G102500 Populus trichocarpa
Potri.008G117300 Populus trichocarpa
Potri.017G112400 Populus trichocarpa
Pp3c2_24320 Physcomitrium patens
Pp3c2_24400 Physcomitrium patens
Pp3c2_24420 Physcomitrium patens
Pp3c2_24500 Physcomitrium patens
Pp3c3_340 Physcomitrium patens
Pp3c4_22490 Physcomitrium patens
Pp3c5_3730 Physcomitrium patens
Pp3c7_14330 Physcomitrium patens
Prupe.1G306100 Prunus persica
Prupe.3G239900 Prunus persica
Prupe.6G331600 Prunus persica
Psat2g086600 Pisum sativum
Psat3g190560 Pisum sativum
Psat3g190720 Pisum sativum
PSO017G3680 Papaver somniferum
PSO478G0566 Papaver somniferum
QL02p052608 Quercus lobata
QL02p052623 Quercus lobata
QL02p052636 Quercus lobata
QL05p027024 Quercus lobata
RcHm_v2.0_Chr2g0163151 Rosa chinensis
RcHm_v2.0_Chr4g0435751 Rosa chinensis
RcHm_v2.0_Chr7g0226911 Rosa chinensis
Rhsim08G0079600 Rhododendron simsii
Rhsim08G0079700 Rhododendron simsii
Rhsim09G0111600 Rhododendron simsii
Rhsim10G0063500 Rhododendron simsii
Rhsim12G0038700 Rhododendron simsii
Sabra04G0078000 Salix brachista
Sabra04G0078100 Salix brachista
SalBow5G3873 Salvia bowleyana
SalBow8G2267 Salvia bowleyana
Sc04g0006670 Simmondsia chinensis
Sed0002822 Sechium edule
Sed0010260 Sechium edule
SEGI_22727 Sequoiadendron giganteum
SGA_v2.0_scaffold33G13425 Striga asiatica
SHI30149 Sapria himalayana
SMO117G0119 Selaginella moellendorffii
Solyc02g085730.3 Solanum lycopersicum
Sopen02g030420 Solanum pennellii
Sp1g11790 Schrenkiella parvula
Sp2g15000 Schrenkiella parvula
Sp2g15020 Schrenkiella parvula
TAR371G1030 Trochodendron aralioides
TAR374G0641 Trochodendron aralioides
THA.LOC104805247 Tarenaya hassleriana
THA.LOC104824037 Tarenaya hassleriana
THA.LOC104825709 Tarenaya hassleriana
Thecc.02G076400 Theobroma cacao
Thecc.02G360200 Theobroma cacao
Thecc.04G137800 Theobroma cacao
Thhalv10004810m.g Eutrema salsugineum
Thhalv10004824m.g Eutrema salsugineum
Thhalv10008630m.g Eutrema salsugineum
TPR.G25950 Trifolium pratense
TPR.G4480 Trifolium pratense
TWI31G0710 Tripterygium wilfordii
TWI75G1012 Tripterygium wilfordii
TWI79G1425 Tripterygium wilfordii
unitig_21.g20960 Utricularia gibba
vmacro05574 Vaccinium macrocarpon
vmacro10533 Vaccinium macrocarpon
vmacro18105 Vaccinium macrocarpon
VMungo0464G0386 Vigna mungo
VMungo1215G1546 Vigna mungo
VMungo1383G0067 Vigna mungo
Zm00001eb020680 Zea mays
Zm00001eb393530 Zea mays

User provided reference genes

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