Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19150 Brassica napus
A01p19160 Brassica napus
A06p18410 Brassica napus
Aa31LG2G1680 Aethionema arabicum
Aa31LG4G17820 Aethionema arabicum
Aa31LG4G17870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2080 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.574 Anthoceros agrestis
Actinidia04168 Actinidia chinensis
Actinidia06129 Actinidia chinensis
Actinidia18671 Actinidia chinensis
Actinidia27290 Actinidia chinensis
Ah.07g197860 Amaranthus hybridus
Ah.12g053120 Amaranthus hybridus
Ah.13g070520 Amaranthus hybridus
AL2G10100 Arabidopsis lyrata
AL5G29060 Arabidopsis lyrata
AL7G24940 Arabidopsis lyrata
Aqoxy7G00030 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1WY19I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1ZHN64 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.47ZJQ3 Arachis hypogaea
AT1G64650 Arabidopsis thaliana
AT3G49310 Arabidopsis thaliana
AT4G27720 Arabidopsis thaliana
ATR0620G160 Amborella trichopoda
Atru.chr12.2316 Acer truncatum
Atru.chr9.1909 Acer truncatum
AUR62007041 Chenopodium quinoa
AUR62019905 Chenopodium quinoa
AUR62035572 Chenopodium quinoa
AUR62044430 Chenopodium quinoa
BcaB01g00726 Brassica carinata
BcaB02g09583 Brassica carinata
BcaB07g31486 Brassica carinata
BcaB07g31490 Brassica carinata
BcaC01g02401 Brassica carinata
BcaC07g39400 Brassica carinata
BcaC07g39576 Brassica carinata
BcaC09g50546 Brassica carinata
BcaNung01636 Brassica carinata
BolC1t02363H Brassica oleracea
BolC1t02364H Brassica oleracea
BolC3t18821H Brassica oleracea
BolC8t50050H Brassica oleracea
BolC8t50246H Brassica oleracea
BolC8t50247H Brassica oleracea
BraA01t01857Z Brassica rapa
BraA01t01858Z Brassica rapa
C01p24060 Brassica napus
C01p24070 Brassica napus
C03p65680 Brassica napus
C08p24320 Brassica napus
C08p26280 Brassica napus
C08p26290 Brassica napus
CAN.G335.5 Capsicum annuum
CAN.G481.62 Capsicum annuum
CANSAT21G1722 Cannabis sativa
CARHR046260 Cardamine hirsuta
CARHR056190 Cardamine hirsuta
CARHR158250 Cardamine hirsuta
CARHR189070 Cardamine hirsuta
CARHR235440 Cardamine hirsuta
Carub.0002s0008 Capsella rubella
Carub.0005s1555 Capsella rubella
Carub.0007s1310 Capsella rubella
Ca_16736_v3 Cicer arietinum L.
CBR_g23298 Chara braunii
CBR_g3911 Chara braunii
CBR_g44925 Chara braunii
Cc02_g01140 Coffea canephora
CDE02G0506 Ceratophyllum demersum
CDE04G1601 Ceratophyllum demersum
CDE11G0145 Ceratophyllum demersum
CDE12G0130 Ceratophyllum demersum
Cfa016193 Carpinus fangiana
Ciclev10020066m.g Citrus clementina
Ciclev10020083m.g Citrus clementina
CiPaw.05G201000 Carya illinoinensis
CiPaw.06G043800 Carya illinoinensis
CiPaw.11G113700 Carya illinoinensis
ClCG01G000230 Citrullus lanatus
ClCG01G025040 Citrullus lanatus
COL.COLO4_10782 Corchorus olitorius
COL.COLO4_16823 Corchorus olitorius
Cpa.g.sc1337.3 Carica papaya
Cpa.g.sc3.122 Carica papaya
Cre13.g580150 Chlamydomonas reinhardtii
Cre16.g695500 Chlamydomonas reinhardtii
CsaV3_5G000350 Cucumis sativus L.
CsaV3_6G052220 Cucumis sativus L.
CSS0006146 Camellia sinensis var. sinensis
CSS0014667 Camellia sinensis var. sinensis
CSS0014900 Camellia sinensis var. sinensis
CSS0019406 Camellia sinensis var. sinensis
CSS0032975 Camellia sinensis var. sinensis
CSS0046713 Camellia sinensis var. sinensis
DCAR_008962 Daucus carota
DCAR_020348 Daucus carota
Dinv12009 Davidia involucrata
Dinv29242 Davidia involucrata
Dinv35362 Davidia involucrata
Duzib068G0664 Durio zibethinus
Duzib084G0209 Durio zibethinus
Duzib205G0055 Durio zibethinus
ECA233G5683 Erigeron canadensis
ECA234G1761 Erigeron canadensis
ECA238G3348 Erigeron canadensis
EL10Ac3g05236 Beta vulgaris
EL10Ac5g12453 Beta vulgaris
Eucgr.A01432 Eucalyptus grandis
FAN01G0596 Fragaria x ananassa
FAN03G3453 Fragaria x ananassa
FAN04G3076 Fragaria x ananassa
FAN06G2336 Fragaria x ananassa
FAN08G1635 Fragaria x ananassa
FAN10G2713 Fragaria x ananassa
FAN10G2855 Fragaria x ananassa
FAN13G2365 Fragaria x ananassa
FAN18G3417 Fragaria x ananassa
FvH4_5g11030 Fragaria vesca
FvH4_7g32400 Fragaria vesca
Glyma.04G232500 Glycine max
Glyma.06G132500 Glycine max
Glyma.13G037400 Glycine max
Gohir.A08G081500 Gossypium hirsutum
Gohir.A08G102200 Gossypium hirsutum
Gohir.A09G185900 Gossypium hirsutum
Gohir.A11G015900 Gossypium hirsutum
Gohir.A12G247700 Gossypium hirsutum
Gohir.D08G113400 Gossypium hirsutum
Gohir.D08G123400 Gossypium hirsutum
Gohir.D09G180900 Gossypium hirsutum
Gohir.D11G015900 Gossypium hirsutum
Gohir.D12G248400 Gossypium hirsutum
Gorai.004G122300 Gossypium raimondii
Gorai.004G130100 Gossypium raimondii
Gorai.006G202900 Gossypium raimondii
Gorai.007G016500 Gossypium raimondii
Gorai.008G266400 Gossypium raimondii
GSVIVG01019637001 Vitis vinifera
GSVIVG01038605001 Vitis vinifera
HanXRQChr03g0086541 Helianthus annuus
HanXRQChr04g0100431 Helianthus annuus
HanXRQChr04g0113281 Helianthus annuus
HanXRQChr07g0192131 Helianthus annuus
HanXRQChr09g0251221 Helianthus annuus
HanXRQChr09g0251241 Helianthus annuus
Haze_00262 Corylus avellana
Haze_09151 Corylus avellana
Hma1.2p1_0440F.1_g153750 Hydrangea macrophylla
Hma1.2p1_0512F.1_g169300 Hydrangea macrophylla
HPP92_002522 Vanilla planifolia
HPP92_008887 Vanilla planifolia
Hund11355 Selenicereus undatus
Hund21025 Selenicereus undatus
Lalb_Chr08g0240001 Lupinus albus
Lalb_Chr11g0067111 Lupinus albus
Lalb_Chr23g0271721 Lupinus albus
Lj1C1024T11 Lonicera japonica
Lj1g0000653 Lotus japonicus
Lj3C901G16 Lonicera japonica
Lsat_1_v5_gn_2_135200 Lactuca sativa
Lsat_1_v5_gn_2_59921 Lactuca sativa
Lsat_1_v5_gn_3_108240 Lactuca sativa
Lsat_1_v5_gn_5_72200 Lactuca sativa
Lsat_1_v5_gn_5_97641 Lactuca sativa
Lsat_1_v5_gn_6_82260 Lactuca sativa
Lsat_1_v5_gn_6_8660 Lactuca sativa
Lsat_1_v5_gn_6_9141 Lactuca sativa
Lsat_1_v5_gn_8_133460 Lactuca sativa
Lsat_1_v5_gn_9_67721 Lactuca sativa
Manes.01G037400 Manihot esculenta
Manes.01G052100 Manihot esculenta
Manes.02G003800 Manihot esculenta
Mapoly0037s0043 Marchantia polymorpha
Mapoly0138s0039 Marchantia polymorpha
MBI04_g11917_MAGBIO Magnolia biondii
MBI12_g03929_MAGBIO Magnolia biondii
MCO10G369 Micromonas commoda
MCO15G528 Micromonas commoda
MD01G1225400 Malus domestica
MD06G1117300 Malus domestica
MD07G1295900 Malus domestica
Medtr3g092030 Medicago truncatula
MELO3C005898.2 Cucumis melo
MELO3C007090.2 Cucumis melo
MELO3C035600.2 Cucumis melo
Migut.F00175 Erythranthe guttata
Migut.F01009 Erythranthe guttata
MSTRG.27004 Avicennia marina
MSTRG.8532 Avicennia marina
MSTRG.8631 Avicennia marina
Nitab4.5_0000151g0370 Nicotiana tabacum
Nitab4.5_0000837g0100 Nicotiana tabacum
Nitab4.5_0008197g0030 Nicotiana tabacum
Nitab4.5_0010367g0030 Nicotiana tabacum
Nn3g18895 Nelumbo nucifera
Nn5g27180 Nelumbo nucifera
Oeu010706.1 Olea europaea
Oeu023672.1 Olea europaea
Oeu026549.1 Olea europaea
Oeu043315.1 Olea europaea
Oeu055182.1 Olea europaea
Os03g0114800 Oryza sativa ssp. japonica
Os10g0519600 Oryza sativa ssp. japonica
Peaxi162Scf00161g00124 Petunia axillaris
Peaxi162Scf00740g00423 Petunia axillaris
PGR042G1223 Punica granatum
PGSC0003DMG400004318 Solanum tuberosum
PGSC0003DMG400018515 Solanum tuberosum
Phvul.009G048300 Phaseolus vulgaris
Potri.001G085032 Populus trichocarpa
Potri.003G145600 Populus trichocarpa
Potri.012G020500 Populus trichocarpa
Potri.015G008100 Populus trichocarpa
Pp3c20_16560 Physcomitrium patens
Pp3c20_4860 Physcomitrium patens
Pp3c24_4810 Physcomitrium patens
Pp3c4_17400 Physcomitrium patens
Pp3c8_9720 Physcomitrium patens
PRCOL_00000345 Prasinoderma coloniale
Prupe.2G315500 Prunus persica
Prupe.5G128400 Prunus persica
Psat5g074920 Pisum sativum
PSO063G1816 Papaver somniferum
PSO135G0002 Papaver somniferum
PSO384G1967 Papaver somniferum
PSO782G2064 Papaver somniferum
QL02p029148 Quercus lobata
QL09p007632 Quercus lobata
QL09p007639 Quercus lobata
RcHm_v2.0_Chr1g0381971 Rosa chinensis
RcHm_v2.0_Chr7g0186771 Rosa chinensis
Rhsim02G0251200 Rhododendron simsii
Rhsim07G0078400 Rhododendron simsii
Rhsim09G0207600 Rhododendron simsii
Sabra03G0105800 Salix brachista
Sabra12G0012600 Salix brachista
Sabra15G0006200 Salix brachista
SalBow4G1319 Salvia bowleyana
Sc01g0010570 Simmondsia chinensis
Sc07g0010200 Simmondsia chinensis
Sc13g0010030 Simmondsia chinensis
Sc22g0004730 Simmondsia chinensis
Sed0003971 Sechium edule
Sed0004386 Sechium edule
Sed0005534 Sechium edule
Sed0015963 Sechium edule
SEGI_40998 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08443 Striga asiatica
SGA_v2.0_scaffold44G16830 Striga asiatica
SHI06901 Sapria himalayana
SMO169G0258 Selaginella moellendorffii
Solyc03g082660.3 Solanum lycopersicum
Solyc08g066750.3 Solanum lycopersicum
Sopen03g022420 Solanum pennellii
Sopen08g020720 Solanum pennellii
Sp2g00060 Schrenkiella parvula
Sp5g12760 Schrenkiella parvula
Sp7g25690 Schrenkiella parvula
TAR374G1042 Trochodendron aralioides
TAR375G0049 Trochodendron aralioides
TAR629G1070 Trochodendron aralioides
THA.LOC104809308 Tarenaya hassleriana
THA.LOC104811902 Tarenaya hassleriana
THA.LOC104814941 Tarenaya hassleriana
THA.LOC104825159 Tarenaya hassleriana
Thecc.03G204600 Theobroma cacao
Thecc.03G222600 Theobroma cacao
Thhalv10010332m.g Eutrema salsugineum
Thhalv10023452m.g Eutrema salsugineum
Thhalv10025154m.g Eutrema salsugineum
TPR.G33624 Trifolium pratense
TWI14G0967 Tripterygium wilfordii
TWI23G0158 Tripterygium wilfordii
TWI39G0170 Tripterygium wilfordii
TWI60G0490 Tripterygium wilfordii
unitig_0.g2451 Utricularia gibba
unitig_52.g17711 Utricularia gibba
unitig_748.g7287 Utricularia gibba
vmacro10141 Vaccinium macrocarpon
vmacro13854 Vaccinium macrocarpon
VMungo1309G1882 Vigna mungo
Zm00001eb000970 Zea mays
Zm00001eb043390 Zea mays
Zm00001eb256040 Zea mays
Zm00001eb404020 Zea mays

User provided reference genes

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