Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05320 Brassica napus
A08p06660 Brassica napus
Aa31LG9G3860 Aethionema arabicum
Aa31LG9G3890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1729 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1730 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1742 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1743 Anthoceros agrestis
Actinidia23411 Actinidia chinensis
Actinidia35855 Actinidia chinensis
Actinidia38750 Actinidia chinensis
Actinidia38751 Actinidia chinensis
Ah.14g086370 Amaranthus hybridus
AL1G18700 Arabidopsis lyrata
AL1G18710 Arabidopsis lyrata
AL5G12310 Arabidopsis lyrata
AL7G42760 Arabidopsis lyrata
Aqoxy2G03980 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ICL3YR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZGTC82 Arachis hypogaea
AT1G08300 Arabidopsis thaliana
AT4G13750 Arabidopsis thaliana
ATR0829G112 Amborella trichopoda
ATR0829G161 Amborella trichopoda
Atru.chr4.1618 Acer truncatum
Atru.chr4.1622 Acer truncatum
Atru.chr4.1623 Acer truncatum
Atru.chr4.1627 Acer truncatum
Atru.chr4.1628 Acer truncatum
AUR62018579 Chenopodium quinoa
AUR62018580 Chenopodium quinoa
AUR62018583 Chenopodium quinoa
AUR62020836 Chenopodium quinoa
BcaB04g17657 Brassica carinata
BcaB07g34075 Brassica carinata
BcaC07g37335 Brassica carinata
BolC5t29395H Brassica oleracea
BolC8t47622H Brassica oleracea
BraA06t23740Z Brassica rapa
BraA08t32682Z Brassica rapa
C05p06400 Brassica napus
C08p07730 Brassica napus
C08p07740 Brassica napus
CAN.G1333.3 Capsicum annuum
CAN.G1333.4 Capsicum annuum
CAN.G1333.5 Capsicum annuum
CAN.G1333.6 Capsicum annuum
CAN.G1333.8 Capsicum annuum
CANSAT78G2520 Cannabis sativa
CARHR008150 Cardamine hirsuta
CARHR008160 Cardamine hirsuta
CARHR219530 Cardamine hirsuta
CARHR219560 Cardamine hirsuta
Carub.0001s0765 Capsella rubella
Carub.0007s2871 Capsella rubella
Ca_17971_v3 Cicer arietinum L.
CBR_g6414 Chara braunii
Cc03_g08030 Coffea canephora
Cfa014941 Carpinus fangiana
Cfa014942 Carpinus fangiana
Ciclev10004121m.g Citrus clementina
CiPaw.01G119000 Carya illinoinensis
CiPaw.01G119100 Carya illinoinensis
CiPaw.01G119200 Carya illinoinensis
CiPaw.01G119300 Carya illinoinensis
CiPaw.01G119400 Carya illinoinensis
ClCG05G003260 Citrullus lanatus
COL.COLO4_20180 Corchorus olitorius
Cpa.g.c27575.1 Carica papaya
Cpa.g.c30822.1 Carica papaya
Cpa.g.c47077 Carica papaya
Cpa.g.sc1159.2 Carica papaya
Cpa.g.sc1159.3 Carica papaya
Cpa.g.sc83.15 Carica papaya
Cre14.g608150 Chlamydomonas reinhardtii
Cre14.g608200 Chlamydomonas reinhardtii
Cre16.g658200 Chlamydomonas reinhardtii
Cre17.g697150 Chlamydomonas reinhardtii
CsaV3_3G010890 Cucumis sativus L.
CSS0000956 Camellia sinensis var. sinensis
DCAR_002789 Daucus carota
DCAR_030811 Daucus carota
Dinv27217 Davidia involucrata
Dinv27218 Davidia involucrata
Dinv38212 Davidia involucrata
Duzib212G0344 Durio zibethinus
ECA233G4033 Erigeron canadensis
ECA233G4700 Erigeron canadensis
ECA233G6204 Erigeron canadensis
ECA246G4020 Erigeron canadensis
ECA246G4185 Erigeron canadensis
EL10Ac3g07477 Beta vulgaris
Eucgr.A01634 Eucalyptus grandis
Eucgr.A01635 Eucalyptus grandis
Eucgr.H02741 Eucalyptus grandis
Eucgr.H02751 Eucalyptus grandis
Eucgr.H02752 Eucalyptus grandis
Eucgr.H02754 Eucalyptus grandis
Eucgr.H02755 Eucalyptus grandis
Eucgr.H02757 Eucalyptus grandis
Eucgr.H02758 Eucalyptus grandis
Eucgr.H02759 Eucalyptus grandis
Eucgr.H02761 Eucalyptus grandis
Eucgr.H02762 Eucalyptus grandis
Eucgr.H02765 Eucalyptus grandis
Eucgr.H02767 Eucalyptus grandis
FAN07G2373 Fragaria x ananassa
FAN12G2750 Fragaria x ananassa
FAN15G0433 Fragaria x ananassa
FAN17G0157 Fragaria x ananassa
FAN22G0412 Fragaria x ananassa
FAN22G1019 Fragaria x ananassa
FAN22G2028 Fragaria x ananassa
FAN24G1108 Fragaria x ananassa
FAN27G2824 Fragaria x ananassa
FvH4_2g13620 Fragaria vesca
FvH4_4g13620 Fragaria vesca
FvH4_4g13640 Fragaria vesca
FvH4_4g13660 Fragaria vesca
Glyma.08G111400 Glycine max
Gohir.A03G095600 Gossypium hirsutum
Gohir.D02G113900 Gossypium hirsutum
Gorai.005G129600 Gossypium raimondii
GSVIVG01020920001 Vitis vinifera
HanXRQChr02g0059031 Helianthus annuus
HanXRQChr02g0059601 Helianthus annuus
HanXRQChr02g0059621 Helianthus annuus
HanXRQChr11g0339061 Helianthus annuus
HanXRQChr16g0498001 Helianthus annuus
HanXRQChr16g0515551 Helianthus annuus
HanXRQChr16g0515561 Helianthus annuus
Haze_11626 Corylus avellana
Haze_11627 Corylus avellana
Haze_11628 Corylus avellana
Haze_11629 Corylus avellana
Hma1.2p1_0319F.1_g123840 Hydrangea macrophylla
Hma1.2p1_0383F.1_g140360 Hydrangea macrophylla
Hma1.2p1_0383F.1_g140370 Hydrangea macrophylla
Hma1.2p1_0383F.1_g140550 Hydrangea macrophylla
Hma1.2p1_0383F.1_g140560 Hydrangea macrophylla
Hma1.2p1_0383F.1_g140570 Hydrangea macrophylla
Hma1.2p1_0383F.1_g140620 Hydrangea macrophylla
HPP92_003865 Vanilla planifolia
HPP92_003883 Vanilla planifolia
HPP92_020875 Vanilla planifolia
HPP92_020882 Vanilla planifolia
HPP92_020883 Vanilla planifolia
HPP92_028111 Vanilla planifolia
HPP92_028129 Vanilla planifolia
HPP92_028130 Vanilla planifolia
Hund05344 Selenicereus undatus
Lalb_Chr12g0205531 Lupinus albus
Lalb_Chr12g0205541 Lupinus albus
Lj4g0001754 Lotus japonicus
Lj6A516T55 Lonicera japonica
Lj6A516T56 Lonicera japonica
Lj6A517T24 Lonicera japonica
Lj6A517T27 Lonicera japonica
Lj6A517T28 Lonicera japonica
Lj6A523G32 Lonicera japonica
Lj6A523T33 Lonicera japonica
Lj6A524T44 Lonicera japonica
Lj6A525G37 Lonicera japonica
Lj6A526G34 Lonicera japonica
Lj6C516G5 Lonicera japonica
Lj6C516T2 Lonicera japonica
Lj6C517T2 Lonicera japonica
Lj6C522G10 Lonicera japonica
Lj6C523G2 Lonicera japonica
Lj6C524T11 Lonicera japonica
Lj6C525G6 Lonicera japonica
Lj6C525G7 Lonicera japonica
Lj6C525G9 Lonicera japonica
Lj6C526T11 Lonicera japonica
Lj6C526T4 Lonicera japonica
Lj6P516T44 Lonicera japonica
Lj6P517T17 Lonicera japonica
Lj6P524T31 Lonicera japonica
Lsat_1_v5_gn_4_177540 Lactuca sativa
Lsat_1_v5_gn_6_60880 Lactuca sativa
Lsat_1_v5_gn_6_60921 Lactuca sativa
Lsat_1_v5_gn_6_78720 Lactuca sativa
Lsat_1_v5_gn_8_141841 Lactuca sativa
Manes.03G146000 Manihot esculenta
Mapoly0105s0052 Marchantia polymorpha
MBI04_g21151_MAGBIO Magnolia biondii
MCO16G136 Micromonas commoda
MD04G1012800 Malus domestica
MD04G1012900 Malus domestica
MD04G1013100 Malus domestica
MD04G1013300 Malus domestica
Medtr4g055340 Medicago truncatula
Medtr4g082295 Medicago truncatula
Medtr8g085280 Medicago truncatula
MELO3C006307.2 Cucumis melo
Migut.G00912 Erythranthe guttata
Migut.N00402 Erythranthe guttata
Migut.N01843 Erythranthe guttata
Migut.N01844 Erythranthe guttata
Nitab4.5_0000401g0100 Nicotiana tabacum
Nitab4.5_0006215g0010 Nicotiana tabacum
Nitab4.5_0006964g0030 Nicotiana tabacum
Nn1g07933 Nelumbo nucifera
Oeu045313.1 Olea europaea
Oeu054534.1 Olea europaea
Oeu054535.1 Olea europaea
Oeu055768.2 Olea europaea
Os03g0803700 Oryza sativa ssp. japonica
Os03g0803800 Oryza sativa ssp. japonica
Peaxi162Scf00047g00342 Petunia axillaris
PGR083G1386 Punica granatum
PGSC0003DMG401026419 Solanum tuberosum
PGSC0003DMG402026419 Solanum tuberosum
Phvul.003G291200 Phaseolus vulgaris
Potri.001G317200 Populus trichocarpa
Pp3c21_20720 Physcomitrium patens
Prupe.1G159000 Prunus persica
Prupe.1G159100 Prunus persica
Prupe.1G159200 Prunus persica
Prupe.1G358100 Prunus persica
Psat1g137200 Pisum sativum
Psat7g021720 Pisum sativum
Psat7g074440 Pisum sativum
PSO017G1443 Papaver somniferum
PSO017G1666 Papaver somniferum
PSO017G5596 Papaver somniferum
PSO063G4028 Papaver somniferum
PSO063G7363 Papaver somniferum
QL05p014183 Quercus lobata
QL05p014243 Quercus lobata
QL05p014269 Quercus lobata
QL05p014435 Quercus lobata
QL05p014602 Quercus lobata
QL05p014618 Quercus lobata
QL05p014631 Quercus lobata
RcHm_v2.0_Chr4g0414341 Rosa chinensis
RcHm_v2.0_Chr4g0414351 Rosa chinensis
RcHm_v2.0_Chr6g0275261 Rosa chinensis
RcHm_v2.0_Chr7g0213881 Rosa chinensis
RcHm_v2.0_Chr7g0213891 Rosa chinensis
Rhsim09G0058500 Rhododendron simsii
Sabra16G0200600 Salix brachista
Sc13g0000230 Simmondsia chinensis
Sed0007147 Sechium edule
Sed0020750 Sechium edule
SEGI_10632 Sequoiadendron giganteum
SEGI_11248 Sequoiadendron giganteum
SEGI_23744 Sequoiadendron giganteum
SEGI_24835 Sequoiadendron giganteum
SEGI_31433 Sequoiadendron giganteum
SEGI_39531 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12585 Striga asiatica
SHI00028 Sapria himalayana
SHI00029 Sapria himalayana
SHI00030 Sapria himalayana
SHI00031 Sapria himalayana
SHI31577 Sapria himalayana
SHI33086 Sapria himalayana
SMO337G0030 Selaginella moellendorffii
Solyc09g092100.4 Solanum lycopersicum
Sopen09g034970 Solanum pennellii
Sp1g06930 Schrenkiella parvula
Sp7g11520 Schrenkiella parvula
TAR365G0459 Trochodendron aralioides
TAR365G0582 Trochodendron aralioides
TAR365G0670 Trochodendron aralioides
TAR365G0690 Trochodendron aralioides
TAR365G0886 Trochodendron aralioides
TAR365G0903 Trochodendron aralioides
THA.LOC104804807 Tarenaya hassleriana
Thecc.04G158600 Theobroma cacao
Thecc.04G199700 Theobroma cacao
Thecc.06G026700 Theobroma cacao
Thecc.06G027400 Theobroma cacao
Thhalv10006953m.g Eutrema salsugineum
Thhalv10024181m.g Eutrema salsugineum
TPR.G11869 Trifolium pratense
TPR.G3986 Trifolium pratense
TWI09G0668 Tripterygium wilfordii
unitig_8.g4999 Utricularia gibba
vmacro00454 Vaccinium macrocarpon
vmacro00455 Vaccinium macrocarpon
vmacro00456 Vaccinium macrocarpon
VMungo0251G3111 Vigna mungo
VMungo1127G1482 Vigna mungo
VMungo1127G1955 Vigna mungo
VMungo1127G2260 Vigna mungo
VMungo1383G0106 Vigna mungo
VMungo1383G2708 Vigna mungo
Zm00001eb061370 Zea mays

User provided reference genes

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