Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15370 Brassica napus
A02p15380 Brassica napus
A06p14510 Brassica napus
A07p35190 Brassica napus
A07p39790 Brassica napus
A08p30390 Brassica napus
A09p59940 Brassica napus
Aa31LG4G4240 Aethionema arabicum
Aa31LG7G3140 Aethionema arabicum
Aa31LG8G10140 Aethionema arabicum
Actinidia14344 Actinidia chinensis
Actinidia14345 Actinidia chinensis
Actinidia14849 Actinidia chinensis
Actinidia16616 Actinidia chinensis
Actinidia31030 Actinidia chinensis
Actinidia39810 Actinidia chinensis
Ah.11g047110 Amaranthus hybridus
AL1G30900 Arabidopsis lyrata
AL2G27780 Arabidopsis lyrata
AL2G33780 Arabidopsis lyrata
Aqoxy3G00391 Aquilegia oxysepala
Aqoxy3G03905 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9T7939 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EQC3K1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GYR9IA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HRK85C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I0GMKU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K4HSU9 Arachis hypogaea
AT1G18470 Arabidopsis thaliana
AT1G68820 Arabidopsis thaliana
AT1G73950 Arabidopsis thaliana
ATR0564G036 Amborella trichopoda
Atru.chr11.1350 Acer truncatum
Atru.chr9.756 Acer truncatum
Atru.chr9.757 Acer truncatum
AUR62032191 Chenopodium quinoa
AUR62036956 Chenopodium quinoa
AUR62043677 Chenopodium quinoa
BcaB03g12980 Brassica carinata
BcaB03g12982 Brassica carinata
BcaB03g15853 Brassica carinata
BcaB05g24416 Brassica carinata
BcaB07g31854 Brassica carinata
BcaC03g14998 Brassica carinata
BcaC03g14999 Brassica carinata
BcaC05g25738 Brassica carinata
BcaC07g41327 Brassica carinata
BcaC07g41328 Brassica carinata
BcaC08g46332 Brassica carinata
BolC2t08607H Brassica oleracea
BolC2t08610H Brassica oleracea
BolC2t08611H Brassica oleracea
BolC5t30373H Brassica oleracea
BolC6t39322H Brassica oleracea
BolC6t39841H Brassica oleracea
BolC8t49490H Brassica oleracea
BolC8t51887H Brassica oleracea
BraA02t06599Z Brassica rapa
BraA06t24576Z Brassica rapa
BraA07t31113Z Brassica rapa
BraA07t31526Z Brassica rapa
BraA08t34972Z Brassica rapa
BraA09t41365Z Brassica rapa
C02p25380 Brassica napus
C02p25440 Brassica napus
C05p16730 Brassica napus
C06p41070 Brassica napus
C06p48060 Brassica napus
C08p18640 Brassica napus
C08p43380 Brassica napus
CAN.G184.88 Capsicum annuum
CAN.G438.115 Capsicum annuum
CANSAT64G1205 Cannabis sativa
CANSAT80G0879 Cannabis sativa
CARHR019080 Cardamine hirsuta
CARHR061660 Cardamine hirsuta
CARHR067060 Cardamine hirsuta
Carub.0001s1810 Capsella rubella
Carub.0002s1540 Capsella rubella
Carub.0002s2072 Capsella rubella
Ca_02538_v3 Cicer arietinum L.
Ca_10518_v3 Cicer arietinum L.
Cc04_g07510 Coffea canephora
Cc11_g10640 Coffea canephora
CDE05G0152 Ceratophyllum demersum
CDE05G0306 Ceratophyllum demersum
CDE05G0370 Ceratophyllum demersum
Cfa018632 Carpinus fangiana
Ciclev10019681m.g Citrus clementina
Ciclev10033721m.g Citrus clementina
CiPaw.15G003300 Carya illinoinensis
CiPaw.15G127000 Carya illinoinensis
CiPaw.16G084000 Carya illinoinensis
CiPaw.16G085100 Carya illinoinensis
ClCG06G015010 Citrullus lanatus
COL.COLO4_03292 Corchorus olitorius
COL.COLO4_22720 Corchorus olitorius
Cpa.g.sc53.117 Carica papaya
Cpa.g.sc549.3 Carica papaya
CsaV3_1G003640 Cucumis sativus L.
CSS0021094 Camellia sinensis var. sinensis
CSS0023337 Camellia sinensis var. sinensis
CSS0029459 Camellia sinensis var. sinensis
CSS0035803 Camellia sinensis var. sinensis
DCAR_015133 Daucus carota
DCAR_030085 Daucus carota
Dinv05800 Davidia involucrata
Dinv16508 Davidia involucrata
Dinv36907 Davidia involucrata
Dinv38587 Davidia involucrata
Duzib068G0137 Durio zibethinus
Duzib084G0748 Durio zibethinus
Duzib251G0514 Durio zibethinus
ECA232G2666 Erigeron canadensis
ECA232G4476 Erigeron canadensis
ECA240G0402 Erigeron canadensis
ECA246G1199 Erigeron canadensis
ECA247G2498 Erigeron canadensis
EL10Ac5g11251 Beta vulgaris
Eucgr.B03056 Eucalyptus grandis
Eucgr.K02655 Eucalyptus grandis
FAN04G1339 Fragaria x ananassa
FAN07G0588 Fragaria x ananassa
FAN08G1397 Fragaria x ananassa
FAN12G1551 Fragaria x ananassa
FAN13G0485 Fragaria x ananassa
FAN17G0731 Fragaria x ananassa
FAN18G1452 Fragaria x ananassa
FAN18G4181 Fragaria x ananassa
FAN22G0772 Fragaria x ananassa
FvH4_4g28120 Fragaria vesca
FvH4_5g12690 Fragaria vesca
Glyma.05G013200 Glycine max
Glyma.05G080300 Glycine max
Glyma.10G204900 Glycine max
Glyma.14G142400 Glycine max
Glyma.16G098500 Glycine max
Glyma.17G121200 Glycine max
Glyma.20G185600 Glycine max
Gohir.A03G097000 Gossypium hirsutum
Gohir.A07G122000 Gossypium hirsutum
Gohir.A09G023500 Gossypium hirsutum
Gohir.A09G046600 Gossypium hirsutum
Gohir.A13G053000 Gossypium hirsutum
Gohir.A13G133440 Gossypium hirsutum
Gohir.D02G116100 Gossypium hirsutum
Gohir.D09G046900 Gossypium hirsutum
Gohir.D13G069600 Gossypium hirsutum
Gorai.005G137800 Gossypium raimondii
Gorai.006G063200 Gossypium raimondii
Gorai.013G079900 Gossypium raimondii
GSVIVG01008237001 Vitis vinifera
GSVIVG01011959001 Vitis vinifera
HanXRQChr02g0044061 Helianthus annuus
HanXRQChr03g0069381 Helianthus annuus
HanXRQChr05g0153911 Helianthus annuus
HanXRQChr07g0192741 Helianthus annuus
HanXRQChr09g0269791 Helianthus annuus
HanXRQChr09g0269801 Helianthus annuus
Haze_17437 Corylus avellana
Haze_18617 Corylus avellana
Hma1.2p1_0340F.1_g129880 Hydrangea macrophylla
Hma1.2p1_0592F.1_g185280 Hydrangea macrophylla
Hma1.2p1_0862F.1_g229890 Hydrangea macrophylla
HPP92_002191 Vanilla planifolia
Hund02525 Selenicereus undatus
Hund10000 Selenicereus undatus
Lalb_Chr02g0151771 Lupinus albus
Lalb_Chr06g0170241 Lupinus albus
Lalb_Chr07g0178601 Lupinus albus
Lalb_Chr12g0197591 Lupinus albus
Lj4g0012224 Lotus japonicus
Lj5C145G3 Lonicera japonica
Lj5g0011423 Lotus japonicus
Lj6C766T6 Lonicera japonica
Lj9A429G51 Lonicera japonica
Lsat_1_v5_gn_1_16080 Lactuca sativa
Lsat_1_v5_gn_2_42320 Lactuca sativa
Lsat_1_v5_gn_3_84920 Lactuca sativa
Lsat_1_v5_gn_5_25100 Lactuca sativa
Lsat_1_v5_gn_8_99821 Lactuca sativa
Manes.01G020500 Manihot esculenta
Manes.05G119500 Manihot esculenta
Manes.06G072500 Manihot esculenta
Manes.14G097200 Manihot esculenta
Mapoly0001s0486 Marchantia polymorpha
Mapoly0117s0002 Marchantia polymorpha
MBI19_g21660_MAGBIO Magnolia biondii
MD06G1176000 Malus domestica
MD06G1176100 Malus domestica
MD06G1211300 Malus domestica
MD13G1047000 Malus domestica
MD14G1222000 Malus domestica
MD16G1048600 Malus domestica
Medtr1g093730 Medicago truncatula
Medtr4g111965 Medicago truncatula
MELO3C017288.2 Cucumis melo
Migut.I00395 Erythranthe guttata
Migut.L01098 Erythranthe guttata
MSTRG.11315 Avicennia marina
MSTRG.7691 Avicennia marina
MSTRG.817 Avicennia marina
Nitab4.5_0000410g0080 Nicotiana tabacum
Nitab4.5_0001599g0220 Nicotiana tabacum
Nitab4.5_0004122g0050 Nicotiana tabacum
Nitab4.5_0011513g0010 Nicotiana tabacum
Nn3g17711 Nelumbo nucifera
Nn4g23721 Nelumbo nucifera
Oeu023798.2 Olea europaea
Oeu024326.1 Olea europaea
Oeu042023.1 Olea europaea
Oeu044634.1 Olea europaea
Os03g0706900 Oryza sativa ssp. japonica
Os09g0410400 Oryza sativa ssp. japonica
Peaxi162Scf00015g00725 Petunia axillaris
Peaxi162Scf00380g00217 Petunia axillaris
PGR044G0027 Punica granatum
PGR102G0058 Punica granatum
PGSC0003DMG400000808 Solanum tuberosum
PGSC0003DMG403005624 Solanum tuberosum
Phvul.003G177000 Phaseolus vulgaris
Phvul.007G102000 Phaseolus vulgaris
Potri.008G116400 Populus trichocarpa
Potri.010G129932 Populus trichocarpa
Potri.012G060100 Populus trichocarpa
Potri.015G050300 Populus trichocarpa
Pp3c14_8800 Physcomitrium patens
Prupe.1G305000 Prunus persica
Prupe.5G217400 Prunus persica
Psat4g043360 Pisum sativum
Psat6g178360 Pisum sativum
PSO017G7179 Papaver somniferum
PSO063G4303 Papaver somniferum
PSO478G3707 Papaver somniferum
PSO782G5563 Papaver somniferum
QL01p046164 Quercus lobata
QL01p046184 Quercus lobata
QL10p022668 Quercus lobata
RcHm_v2.0_Chr4g0435891 Rosa chinensis
RcHm_v2.0_Chr7g0184641 Rosa chinensis
Rhsim08G0136900 Rhododendron simsii
Sabra08G0088100 Salix brachista
Sabra10G0098900 Salix brachista
Sabra12G0043100 Salix brachista
Sabra15G0077600 Salix brachista
SalBow8G1557 Salvia bowleyana
Sc10g0009560 Simmondsia chinensis
Sed0010017 Sechium edule
Sed0019445 Sechium edule
Sed0019937 Sechium edule
SEGI_25813 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10979 Striga asiatica
SGA_v2.0_scaffold36G14522 Striga asiatica
SHI18917 Sapria himalayana
SMO223G0014 Selaginella moellendorffii
SMO223G0035 Selaginella moellendorffii
Solyc03g119760.3 Solanum lycopersicum
Solyc05g009870.4 Solanum lycopersicum
Sopen03g038610 Solanum pennellii
Sopen05g005670 Solanum pennellii
Sp1g16410 Schrenkiella parvula
Sp5g23930 Schrenkiella parvula
Sp5g29150 Schrenkiella parvula
TAR629G1016 Trochodendron aralioides
THA.LOC104801757 Tarenaya hassleriana
THA.LOC104808160 Tarenaya hassleriana
THA.LOC104808183 Tarenaya hassleriana
THA.LOC104811911 Tarenaya hassleriana
THA.LOC104812130 Tarenaya hassleriana
Thecc.02G361600 Theobroma cacao
Thecc.03G028200 Theobroma cacao
Thhalv10007552m.g Eutrema salsugineum
Thhalv10018496m.g Eutrema salsugineum
Thhalv10018499m.g Eutrema salsugineum
TPR.G15194 Trifolium pratense
TPR.G15195 Trifolium pratense
TPR.G26777 Trifolium pratense
TPR.G925 Trifolium pratense
TWI15G1232 Tripterygium wilfordii
TWI31G0612 Tripterygium wilfordii
unitig_22.g6877 Utricularia gibba
unitig_27.g25237 Utricularia gibba
unitig_8.g3026 Utricularia gibba
vmacro10526 Vaccinium macrocarpon
vmacro17675 Vaccinium macrocarpon
VMungo0720G2890 Vigna mungo
VMungo1215G2989 Vigna mungo
Zm00001eb054460 Zea mays
Zm00001eb216620 Zea mays
Zm00001eb312350 Zea mays

User provided reference genes

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