Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p06320 Brassica napus
Aa31LG1G14100 Aethionema arabicum
Aa31sc133G10 Aethionema arabicum
Aa31sc133G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.225 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.521 Anthoceros agrestis
Actinidia29931 Actinidia chinensis
Actinidia29935 Actinidia chinensis
Actinidia38479 Actinidia chinensis
Actinidia38481 Actinidia chinensis
Actinidia38482 Actinidia chinensis
Ah.09g231610 Amaranthus hybridus
Ah.14g084930 Amaranthus hybridus
AL3G43580 Arabidopsis lyrata
AL3G43590 Arabidopsis lyrata
AL6G32120 Arabidopsis lyrata
Aqoxy7G04078 Aquilegia oxysepala
Aqoxy7G04129 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0T42SY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2X24PF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8H5S0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HK8DFN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TGKM3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5UTMI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea
AT2G06005 Arabidopsis thaliana
AT2G06010 Arabidopsis thaliana
AT5G20580 Arabidopsis thaliana
ATR0598G025 Amborella trichopoda
ATR0598G258 Amborella trichopoda
Atru.chr7.1701 Acer truncatum
Atru.chr7.1708 Acer truncatum
AUR62025248 Chenopodium quinoa
AUR62025250 Chenopodium quinoa
AUR62028934 Chenopodium quinoa
AUR62028936 Chenopodium quinoa
BcaB06g26879 Brassica carinata
BcaB06g26882 Brassica carinata
BcaC06g35950 Brassica carinata
BcaC06g35951 Brassica carinata
BolC7t41360H Brassica oleracea
BraA03t10325Z Brassica rapa
BraA07t28424Z Brassica rapa
C03p11680 Brassica napus
C07p09370 Brassica napus
CAN.G1661.12 Capsicum annuum
CAN.G1963.2 Capsicum annuum
CAN.G2458.1 Capsicum annuum
CAN.G404.48 Capsicum annuum
CANSAT56G2952 Cannabis sativa
CANSAT56G4475 Cannabis sativa
CARHR103630 Cardamine hirsuta
CARHR103670 Cardamine hirsuta
CARHR192220 Cardamine hirsuta
Carub.0003s2712 Capsella rubella
Carub.0003s2714 Capsella rubella
Carub.0006s1891 Capsella rubella
Ca_02205_v3 Cicer arietinum L.
Ca_21321_v3 Cicer arietinum L.
CBR_g26318 Chara braunii
CBR_g38469 Chara braunii
Cc06_g12140 Coffea canephora
Cc06_g12190 Coffea canephora
CDE02G0868 Ceratophyllum demersum
CDE05G1851 Ceratophyllum demersum
CDE11G0744 Ceratophyllum demersum
Cfa002987 Carpinus fangiana
Cfa002991 Carpinus fangiana
Ciclev10008755m.g Citrus clementina
Ciclev10009634m.g Citrus clementina
CiPaw.04G143000 Carya illinoinensis
CiPaw.04G143300 Carya illinoinensis
ClCG03G015070 Citrullus lanatus
ClCG03G015100 Citrullus lanatus
COL.COLO4_18096 Corchorus olitorius
COL.COLO4_18100 Corchorus olitorius
Cpa.g.c47777 Carica papaya
Cpa.g.sc28.33 Carica papaya
Cpa.g.sc28.37 Carica papaya
Cpa.g.sc28.42 Carica papaya
CsaV3_1G041010 Cucumis sativus L.
CsaV3_1G041060 Cucumis sativus L.
CSS0005090 Camellia sinensis var. sinensis
CSS0035766 Camellia sinensis var. sinensis
CSS0046237 Camellia sinensis var. sinensis
DCAR_024750 Daucus carota
DCAR_028335 Daucus carota
DCAR_031919 Daucus carota
Dinv25558 Davidia involucrata
Dinv25560 Davidia involucrata
Dinv42391 Davidia involucrata
Dinv42395 Davidia involucrata
Duzib168G0796 Durio zibethinus
Duzib187G0696 Durio zibethinus
ECA236G4601 Erigeron canadensis
ECA240G4665 Erigeron canadensis
EL10Ac8g19056 Beta vulgaris
EL10Ac8g19062 Beta vulgaris
Eucgr.C03263 Eucalyptus grandis
Eucgr.C03267 Eucalyptus grandis
Eucgr.C03278 Eucalyptus grandis
Eucgr.C03281 Eucalyptus grandis
Eucgr.C03328 Eucalyptus grandis
Eucgr.C03331 Eucalyptus grandis
Eucgr.C03340 Eucalyptus grandis
Eucgr.C03348 Eucalyptus grandis
Eucgr.C03501 Eucalyptus grandis
Eucgr.C03511 Eucalyptus grandis
Eucgr.C03513 Eucalyptus grandis
Eucgr.H02780 Eucalyptus grandis
Eucgr.L03294 Eucalyptus grandis
FAN19G1621 Fragaria x ananassa
FAN19G2961 Fragaria x ananassa
FAN23G0492 Fragaria x ananassa
FAN23G1616 Fragaria x ananassa
FAN23G2278 Fragaria x ananassa
FAN26G0120 Fragaria x ananassa
FAN26G1551 Fragaria x ananassa
FAN26G1566 Fragaria x ananassa
FAN28G1803 Fragaria x ananassa
FAN28G2258 Fragaria x ananassa
FvH4_1g08630 Fragaria vesca
FvH4_1g08690 Fragaria vesca
Glyma.09G069700 Glycine max
Glyma.13G110300 Glycine max
Glyma.15G177700 Glycine max
Glyma.17G049400 Glycine max
Gohir.A06G076400 Gossypium hirsutum
Gohir.A13G190800 Gossypium hirsutum
Gohir.D06G075400 Gossypium hirsutum
Gohir.D13G196375 Gossypium hirsutum
Gorai.010G088300 Gossypium raimondii
Gorai.013G224300 Gossypium raimondii
GSVIVG01015081001 Vitis vinifera
GSVIVG01015085001 Vitis vinifera
HanXRQChr03g0060151 Helianthus annuus
HanXRQChr04g0126011 Helianthus annuus
Haze_26010 Corylus avellana
Haze_26014 Corylus avellana
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla
Hma1.2p1_0169F.1_g074550 Hydrangea macrophylla
Hma1.2p1_0169F.1_g074601 Hydrangea macrophylla
HPP92_004364 Vanilla planifolia
HPP92_004366 Vanilla planifolia
HPP92_013380 Vanilla planifolia
HPP92_013382 Vanilla planifolia
Hund26035 Selenicereus undatus
Hund26036 Selenicereus undatus
Lalb_Chr07g0181181 Lupinus albus
Lalb_Chr07g0181191 Lupinus albus
Lalb_Chr12g0200131 Lupinus albus
Lalb_Chr23g0276371 Lupinus albus
Lalb_Chr23g0276381 Lupinus albus
Lj4g0006964 Lotus japonicus
Lj6g0009960 Lotus japonicus
Lj7A687T54 Lonicera japonica
Lj7C687T14 Lonicera japonica
Lsat_1_v5_gn_7_35121 Lactuca sativa
Lsat_1_v5_gn_8_86481 Lactuca sativa
Manes.03G040300 Manihot esculenta
Manes.03G040500 Manihot esculenta
Manes.16G095200 Manihot esculenta
Mapoly0011s0025 Marchantia polymorpha
Mapoly0146s0032 Marchantia polymorpha
MBI13_g42820_MAGBIO Magnolia biondii
MBI19_g11823_MAGBIO Magnolia biondii
MBI19_g16223_MAGBIO Magnolia biondii
MBI19_g37791_MAGBIO Magnolia biondii
MD02G1091100 Malus domestica
MD02G1091400 Malus domestica
MD02G1091600 Malus domestica
MD15G1217300 Malus domestica
MD15G1217700 Malus domestica
Medtr2g041390 Medicago truncatula
Medtr2g041690 Medicago truncatula
Medtr4g125360 Medicago truncatula
MELO3C015519.2 Cucumis melo
MELO3C015522.2 Cucumis melo
Migut.J00924 Erythranthe guttata
Migut.L01564 Erythranthe guttata
MSTRG.10511 Avicennia marina
MSTRG.19458 Avicennia marina
Nitab4.5_0000073g0170 Nicotiana tabacum
Nitab4.5_0000073g0180 Nicotiana tabacum
Nitab4.5_0000343g0210 Nicotiana tabacum
Nitab4.5_0000343g0220 Nicotiana tabacum
Nitab4.5_0000343g0230 Nicotiana tabacum
Nitab4.5_0002966g0010 Nicotiana tabacum
Nitab4.5_0009436g0040 Nicotiana tabacum
Nitab4.5_0011754g0010 Nicotiana tabacum
Nitab4.5_0011754g0020 Nicotiana tabacum
Nn6g32302 Nelumbo nucifera
Nn6g35620 Nelumbo nucifera
Nn8g38636 Nelumbo nucifera
Oeu011491.2 Olea europaea
Oeu031390.1 Olea europaea
Oeu049119.1 Olea europaea
Os04g0446200 Oryza sativa ssp. japonica
Peaxi162Scf00127g00206 Petunia axillaris
Peaxi162Scf00127g01814 Petunia axillaris
Peaxi162Scf00928g00035 Petunia axillaris
Peaxi162Scf00928g00036 Petunia axillaris
PGR044G0908 Punica granatum
PGR044G1875 Punica granatum
PGR044G2482 Punica granatum
PGSC0003DMG400000324 Solanum tuberosum
PGSC0003DMG400013000 Solanum tuberosum
PGSC0003DMG400019032 Solanum tuberosum
Phvul.003G130900 Phaseolus vulgaris
Phvul.009G227200 Phaseolus vulgaris
Potri.006G142000 Populus trichocarpa
Potri.018G056500 Populus trichocarpa
Potri.018G065800 Populus trichocarpa
Pp3c14_25980 Physcomitrium patens
Pp3c22_13730 Physcomitrium patens
Pp3c2_1630 Physcomitrium patens
Pp3c2_6470 Physcomitrium patens
PRCOL_00001776 Prasinoderma coloniale
PRCOL_00002582 Prasinoderma coloniale
Prupe.7G198700 Prunus persica
Prupe.7G199200 Prunus persica
Psat1g134320 Pisum sativum
Psat3g025000 Pisum sativum
Psat4g017640 Pisum sativum
PSO135G0390 Papaver somniferum
PSO135G0567 Papaver somniferum
PSO210G7126 Papaver somniferum
PSO724G0129 Papaver somniferum
QL11p000707 Quercus lobata
QL11p000781 Quercus lobata
RcHm_v2.0_Chr2g0094901 Rosa chinensis
RcHm_v2.0_Chr2g0095141 Rosa chinensis
Rhsim03G0227400 Rhododendron simsii
Rhsim03G0227700 Rhododendron simsii
Rhsim05G0007700 Rhododendron simsii
Sabra06G0111100 Salix brachista
Sabra18G0052300 Salix brachista
SalBow5G0979 Salvia bowleyana
SalBow5G2105 Salvia bowleyana
SalBow6G4624 Salvia bowleyana
Sc18g0002530 Simmondsia chinensis
Sc18g0002560 Simmondsia chinensis
Sed0014235 Sechium edule
Sed0016034 Sechium edule
Sed0016579 Sechium edule
SEGI_04946 Sequoiadendron giganteum
SEGI_06962 Sequoiadendron giganteum
SGA_v2.0_scaffold308G48074 Striga asiatica
SGA_v2.0_scaffold308G48076 Striga asiatica
SHI23809 Sapria himalayana
SMO358G0254 Selaginella moellendorffii
SMO361G0221 Selaginella moellendorffii
SMO361G0519 Selaginella moellendorffii
Solyc07g041780.3 Solanum lycopersicum
Solyc07g041880.1 Solanum lycopersicum
Solyc07g041890.1 Solanum lycopersicum
Solyc12g009080.2 Solanum lycopersicum
Solyc12g009100.2 Solanum lycopersicum
Sopen07g021270 Solanum pennellii
Sopen07g021360 Solanum pennellii
Sopen12g004030 Solanum pennellii
Sopen12g004050 Solanum pennellii
Sp3g24570 Schrenkiella parvula
Sp3g24590 Schrenkiella parvula
Sp6g23900 Schrenkiella parvula
TAR383G0969 Trochodendron aralioides
TAR626G0579 Trochodendron aralioides
THA.LOC104799620 Tarenaya hassleriana
THA.LOC104815332 Tarenaya hassleriana
THA.LOC104815334 Tarenaya hassleriana
THA.LOC104826590 Tarenaya hassleriana
Thecc.09G076700 Theobroma cacao
Thecc.09G077400 Theobroma cacao
Thhalv10008863m.g Eutrema salsugineum
Thhalv10014003m.g Eutrema salsugineum
TPR.G12576 Trifolium pratense
TPR.G27760 Trifolium pratense
TWI34G0307 Tripterygium wilfordii
TWI34G0950 Tripterygium wilfordii
TWI63G1279 Tripterygium wilfordii
unitig_8.g3530 Utricularia gibba
unitig_899.g15177 Utricularia gibba
vmacro06340 Vaccinium macrocarpon
vmacro06343 Vaccinium macrocarpon
vmacro17199 Vaccinium macrocarpon
VMungo1215G3327 Vigna mungo
VMungo1309G0226 Vigna mungo
Zm00001eb081660 Zea mays
Zm00001eb256890 Zea mays

User provided reference genes

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