Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p24930 Brassica napus
A06p18570 Brassica napus
Aa31LG10G9730 Aethionema arabicum
Aa31LG4G17610 Aethionema arabicum
Aa31LG8G4250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1299 Anthoceros agrestis
Actinidia12602 Actinidia chinensis
Actinidia15835 Actinidia chinensis
Actinidia22641 Actinidia chinensis
Actinidia23289 Actinidia chinensis
Actinidia27076 Actinidia chinensis
Ah.13g071810 Amaranthus hybridus
Ah.13g075040 Amaranthus hybridus
Ah.13g075150 Amaranthus hybridus
AL4G18680 Arabidopsis lyrata
AL5G28900 Arabidopsis lyrata
Aqoxy232s005 Aquilegia oxysepala
Aqoxy3G03138 Aquilegia oxysepala
Aqoxy3G03139 Aquilegia oxysepala
Aqoxy3G04079 Aquilegia oxysepala
Aqoxy6G00898 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IZUT4R Arachis hypogaea
AT3G49180 Arabidopsis thaliana
ATR0021G051 Amborella trichopoda
ATR0174G029 Amborella trichopoda
ATR0686G098 Amborella trichopoda
Atru.chr13.711 Acer truncatum
AUR62035333 Chenopodium quinoa
AUR62035906 Chenopodium quinoa
BcaB01g00739 Brassica carinata
BcaB05g22960 Brassica carinata
BcaC07g39390 Brassica carinata
BcaC09g49926 Brassica carinata
BolC1t03049H Brassica oleracea
BolC1t03645H Brassica oleracea
BolC2t09595H Brassica oleracea
BolC5t33917H Brassica oleracea
BolC8t50036H Brassica oleracea
BraA01t02404Z Brassica rapa
BraA05t20027Z Brassica rapa
BraA06t24934Z Brassica rapa
C01p31140 Brassica napus
C02p35790 Brassica napus
C05p13900 Brassica napus
C08p24150 Brassica napus
CAN.G1323.10 Capsicum annuum
CANSAT56G1290 Cannabis sativa
CANSAT64G1916 Cannabis sativa
CANSAT80G0591 Cannabis sativa
CARHR158060 Cardamine hirsuta
Carub.0005s1541 Capsella rubella
Ca_00916_v3 Cicer arietinum L.
Ca_06913_v3 Cicer arietinum L.
Ca_12501_v3 Cicer arietinum L.
Ca_13862_v3 Cicer arietinum L.
Ca_25727_v3 Cicer arietinum L.
Ca_26920_v3 Cicer arietinum L.
CBR_g34009 Chara braunii
Cc04_g09960 Coffea canephora
Cc05_g10730 Coffea canephora
Cc10_g04520 Coffea canephora
CDE05G3079 Ceratophyllum demersum
CDE05G3508 Ceratophyllum demersum
Cfa018082 Carpinus fangiana
Cfa018843 Carpinus fangiana
Cfa024150 Carpinus fangiana
Ciclev10001126m.g Citrus clementina
Ciclev10019919m.g Citrus clementina
Ciclev10024615m.g Citrus clementina
CiPaw.05G179300 Carya illinoinensis
CiPaw.11G009200 Carya illinoinensis
CiPaw.11G009300 Carya illinoinensis
CiPaw.11G155700 Carya illinoinensis
CiPaw.16G042300 Carya illinoinensis
ClCG05G019990 Citrullus lanatus
ClCG07G010110 Citrullus lanatus
COL.COLO4_17477 Corchorus olitorius
COL.COLO4_26530 Corchorus olitorius
COL.COLO4_28084 Corchorus olitorius
Cpa.g.sc13.143 Carica papaya
Cpa.g.sc13.144 Carica papaya
Cpa.g.sc65.26 Carica papaya
Cpa.g.sc77.59 Carica papaya
Cre06.g251350 Chlamydomonas reinhardtii
CsaV3_1G009550 Cucumis sativus L.
CsaV3_4G008220 Cucumis sativus L.
CsaV3_4G034460 Cucumis sativus L.
CSS0003625 Camellia sinensis var. sinensis
CSS0047649 Camellia sinensis var. sinensis
DCAR_011828 Daucus carota
DCAR_016406 Daucus carota
DCAR_019614 Daucus carota
Dinv01308 Davidia involucrata
Dinv04870 Davidia involucrata
Dinv35945 Davidia involucrata
Dinv38532 Davidia involucrata
Dinv39304 Davidia involucrata
Duzib084G0667 Durio zibethinus
Duzib093G1319 Durio zibethinus
Duzib187G1880 Durio zibethinus
ECA232G1214 Erigeron canadensis
ECA236G1837 Erigeron canadensis
ECA246G3545 Erigeron canadensis
EL10Ac3g06747 Beta vulgaris
Eucgr.F02332 Eucalyptus grandis
FAN08G0156 Fragaria x ananassa
FAN11G0062 Fragaria x ananassa
FAN13G0819 Fragaria x ananassa
FAN13G1755 Fragaria x ananassa
FAN15G0333 Fragaria x ananassa
FAN16G2528 Fragaria x ananassa
FAN18G1292 Fragaria x ananassa
FAN20G1644 Fragaria x ananassa
FAN21G1570 Fragaria x ananassa
FAN24G2812 Fragaria x ananassa
FAN25G3148 Fragaria x ananassa
FAN25G3642 Fragaria x ananassa
FAN27G1527 Fragaria x ananassa
FvH4_2g34270 Fragaria vesca
FvH4_3g17760 Fragaria vesca
FvH4_5g07940 Fragaria vesca
Glyma.05G046600 Glycine max
Glyma.08G252500 Glycine max
Glyma.17G238100 Glycine max
Glyma.18G275100 Glycine max
Gohir.A03G053700 Gossypium hirsutum
Gohir.A06G019300 Gossypium hirsutum
Gohir.A13G151000 Gossypium hirsutum
Gohir.D03G113300 Gossypium hirsutum
Gohir.D06G017700 Gossypium hirsutum
Gohir.D13G155100 Gossypium hirsutum
Gorai.003G119500 Gossypium raimondii
Gorai.010G020600 Gossypium raimondii
Gorai.013G175500 Gossypium raimondii
GSVIVG01008512001 Vitis vinifera
GSVIVG01008513001 Vitis vinifera
GSVIVG01009478001 Vitis vinifera
GSVIVG01013716001 Vitis vinifera
GSVIVG01014098001 Vitis vinifera
GSVIVG01036118001 Vitis vinifera
HanXRQChr09g0273041 Helianthus annuus
HanXRQChr09g0273051 Helianthus annuus
HanXRQChr11g0331161 Helianthus annuus
HanXRQChr16g0511391 Helianthus annuus
Haze_07236 Corylus avellana
Haze_09245 Corylus avellana
Haze_18030 Corylus avellana
Hma1.2p1_0360F.1_g135610 Hydrangea macrophylla
HPP92_010732 Vanilla planifolia
Lalb_Chr01g0007521 Lupinus albus
Lalb_Chr06g0172291 Lupinus albus
Lalb_Chr06g0172301 Lupinus albus
Lalb_Chr07g0183321 Lupinus albus
Lalb_Chr07g0183331 Lupinus albus
Lalb_Chr17g0336781 Lupinus albus
Lj1g0004747 Lotus japonicus
Lj3g0015386 Lotus japonicus
Lj4A60G15 Lonicera japonica
Lj4g0022393 Lotus japonicus
Lj5g0014115 Lotus japonicus
Lj9A477G62 Lonicera japonica
Lsat_1_v5_gn_4_109941 Lactuca sativa
Lsat_1_v5_gn_4_76681 Lactuca sativa
Lsat_1_v5_gn_6_115620 Lactuca sativa
Lsat_1_v5_gn_7_101921 Lactuca sativa
Lsat_1_v5_gn_8_164101 Lactuca sativa
Lsat_1_v5_gn_9_54120 Lactuca sativa
Manes.03G092800 Manihot esculenta
Manes.14G052901 Manihot esculenta
Manes.18G038500 Manihot esculenta
Mapoly0003s0009 Marchantia polymorpha
MBI03_g26569_MAGBIO Magnolia biondii
MBI08_g34939_MAGBIO Magnolia biondii
MBI08_g39927_MAGBIO Magnolia biondii
MBI18_g45285_MAGBIO Magnolia biondii
MCO03G151 Micromonas commoda
MD03G1247800 Malus domestica
MD06G1143900 Malus domestica
MD08G1093400 Malus domestica
MD08G1094700 Malus domestica
MD08G1097000 Malus domestica
MD08G1097200 Malus domestica
MD08G1098500 Malus domestica
MD08G1099800 Malus domestica
MD08G1100100 Malus domestica
MD08G1104400 Malus domestica
MD14G1159200 Malus domestica
MD15G1081000 Malus domestica
Medtr1g034785 Medicago truncatula
Medtr4g103740 Medicago truncatula
Medtr4g103760 Medicago truncatula
Medtr7g016970 Medicago truncatula
Medtr7g016980 Medicago truncatula
Medtr8g054430 Medicago truncatula
MELO3C016114.2 Cucumis melo
MELO3C016764.2 Cucumis melo
Migut.C00568 Erythranthe guttata
MSTRG.25068 Avicennia marina
MSTRG.25083 Avicennia marina
Nitab4.5_0000287g0170 Nicotiana tabacum
Nitab4.5_0003677g0020 Nicotiana tabacum
Nn1g03162 Nelumbo nucifera
Nn1g04830 Nelumbo nucifera
Nn4g22378 Nelumbo nucifera
Nn4g24734 Nelumbo nucifera
Oeu012425.1 Olea europaea
Os07g0408100 Oryza sativa ssp. japonica
Peaxi162Scf00458g00325 Petunia axillaris
PGR031G1323 Punica granatum
PGSC0003DMG400007963 Solanum tuberosum
Phvul.003G209700 Phaseolus vulgaris
Phvul.005G107100 Phaseolus vulgaris
Phvul.005G174300 Phaseolus vulgaris
Phvul.008G025800 Phaseolus vulgaris
Phvul.011G167900 Phaseolus vulgaris
Potri.001G384200 Populus trichocarpa
Potri.014G027200 Populus trichocarpa
Potri.015G093300 Populus trichocarpa
Pp3c18_8470 Physcomitrium patens
Pp3c19_15330 Physcomitrium patens
PRCOL_00000868 Prasinoderma coloniale
Prupe.1G433800 Prunus persica
Prupe.4G156700 Prunus persica
Prupe.5G153000 Prunus persica
Psat0s4552g0080 Pisum sativum
Psat4g062600 Pisum sativum
Psat4g140720 Pisum sativum
PSO063G0438 Papaver somniferum
PSO541G1473 Papaver somniferum
PSO541G3218 Papaver somniferum
PSO675G4923 Papaver somniferum
PSO782G4442 Papaver somniferum
QL02p004496 Quercus lobata
QL06p048778 Quercus lobata
QL08p024099 Quercus lobata
QL10p004138 Quercus lobata
QL10p004201 Quercus lobata
RcHm_v2.0_Chr5g0029551 Rosa chinensis
RcHm_v2.0_Chr6g0308111 Rosa chinensis
RcHm_v2.0_Chr7g0190461 Rosa chinensis
Rhsim06G0051400 Rhododendron simsii
Rhsim06G0211600 Rhododendron simsii
Rhsim08G0188500 Rhododendron simsii
Sabra11G0075000 Salix brachista
Sabra14G0018600 Salix brachista
Sabra15G0114900 Salix brachista
Sabra16G0253100 Salix brachista
SalBow7G2328 Salvia bowleyana
Sc02g0007250 Simmondsia chinensis
Sed0010555 Sechium edule
Sed0011561 Sechium edule
Sed0026906 Sechium edule
SEGI_03690 Sequoiadendron giganteum
SEGI_05634 Sequoiadendron giganteum
SEGI_10787 Sequoiadendron giganteum
SEGI_17299 Sequoiadendron giganteum
SEGI_26272 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21510 Striga asiatica
SHI08262 Sapria himalayana
SMO143G0197 Selaginella moellendorffii
Solyc04g078780.3 Solanum lycopersicum
Sopen04g032380 Solanum pennellii
Sp5g12890 Schrenkiella parvula
TAR624G0303 Trochodendron aralioides
TAR625G1294 Trochodendron aralioides
TAR628G1000 Trochodendron aralioides
TAR628G1295 Trochodendron aralioides
TAR629G1236 Trochodendron aralioides
TAR629G2976 Trochodendron aralioides
THA.LOC104798895 Tarenaya hassleriana
THA.LOC104811594 Tarenaya hassleriana
THA.LOC104812306 Tarenaya hassleriana
THA.LOC104814746 Tarenaya hassleriana
THA.LOC104816707 Tarenaya hassleriana
Thecc.03G126600 Theobroma cacao
Thecc.07G132500 Theobroma cacao
Thecc.08G005100 Theobroma cacao
Thhalv10010392m.g Eutrema salsugineum
TPR.G22366 Trifolium pratense
TPR.G23391 Trifolium pratense
TPR.G40412 Trifolium pratense
TWI36G1206 Tripterygium wilfordii
TWI39G0399 Tripterygium wilfordii
TWI39G1032 Tripterygium wilfordii
vmacro11969 Vaccinium macrocarpon
vmacro19215 Vaccinium macrocarpon
vmacro21505 Vaccinium macrocarpon
VMungo1127G0042 Vigna mungo
VMungo1215G0320 Vigna mungo
VMungo1383G1987 Vigna mungo
Zm00001eb296150 Zea mays

User provided reference genes

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