Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p35040 Brassica napus
A07p11860 Brassica napus
A08p26330 Brassica napus
A09p38540 Brassica napus
Aa31LG1G13590 Aethionema arabicum
Aa31LG2G5520 Aethionema arabicum
Aa31LG7G9820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2786 Anthoceros agrestis
Actinidia05904 Actinidia chinensis
Actinidia20135 Actinidia chinensis
Actinidia30881 Actinidia chinensis
Ah.02g120590 Amaranthus hybridus
Ah.02g120600 Amaranthus hybridus
AL1G40800 Arabidopsis lyrata
AL5G16210 Arabidopsis lyrata
AL7G48640 Arabidopsis lyrata
Aqoxy3G01534 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2070PF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4QJN5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H530GP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ND92EZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QHN7Q5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QXLT8L Arachis hypogaea
AT1G27390 Arabidopsis thaliana
AT3G27070 Arabidopsis thaliana
AT3G27080 Arabidopsis thaliana
AT5G40930 Arabidopsis thaliana
ATR0561G018 Amborella trichopoda
Atru.chr11.2316 Acer truncatum
Atru.chr6.2569 Acer truncatum
AUR62003515 Chenopodium quinoa
AUR62017827 Chenopodium quinoa
BcaB03g13988 Brassica carinata
BcaB07g30189 Brassica carinata
BcaC01g01616 Brassica carinata
BcaC01g06955 Brassica carinata
BcaC02g08811 Brassica carinata
BcaC03g17423 Brassica carinata
BcaC05g26555 Brassica carinata
BcaC05g26746 Brassica carinata
BcaC06g35285 Brassica carinata
BcaC08g45697 Brassica carinata
BolC2t11441H Brassica oleracea
BolC3t19664H Brassica oleracea
BolC3t19775H Brassica oleracea
BolC4t24944H Brassica oleracea
BolC4t26621H Brassica oleracea
BolC5t31329H Brassica oleracea
BolC7t42286H Brassica oleracea
BraA02t08513Z Brassica rapa
BraA07t28970Z Brassica rapa
BraA08t34584Z Brassica rapa
BraA09t39360Z Brassica rapa
C02p53730 Brassica napus
C03p73730 Brassica napus
C03p75160 Brassica napus
C04p50210 Brassica napus
C05p26120 Brassica napus
C07p17800 Brassica napus
CAN.G1300.2 Capsicum annuum
CAN.G473.99 Capsicum annuum
CANSAT01G1497 Cannabis sativa
CANSAT64G2899 Cannabis sativa
CARHR026980 Cardamine hirsuta
CARHR148300 Cardamine hirsuta
CARHR213480 Cardamine hirsuta
Carub.0001s2593 Capsella rubella
Carub.0005s0531 Capsella rubella
Carub.0005s0532 Capsella rubella
Carub.0007s3457 Capsella rubella
Ca_04443_v3 Cicer arietinum L.
Ca_16463_v3 Cicer arietinum L.
CBR_g74896 Chara braunii
Cc07_g00830 Coffea canephora
CDE02G0476 Ceratophyllum demersum
CDE02G2356 Ceratophyllum demersum
CDE06G1838 Ceratophyllum demersum
CDE08G0015 Ceratophyllum demersum
Cfa007228 Carpinus fangiana
Cfa009366 Carpinus fangiana
Ciclev10016720m.g Citrus clementina
Ciclev10032790m.g Citrus clementina
CiPaw.03G055500 Carya illinoinensis
CiPaw.04G036600 Carya illinoinensis
CiPaw.05G110400 Carya illinoinensis
CiPaw.06G102200 Carya illinoinensis
ClCG05G013510 Citrullus lanatus
ClCG08G017110 Citrullus lanatus
COL.COLO4_13260 Corchorus olitorius
COL.COLO4_20394 Corchorus olitorius
Cpa.g.sc171.16 Carica papaya
Cpa.g.sc43.51 Carica papaya
Cre12.g534600 Chlamydomonas reinhardtii
CsaV3_2G025460 Cucumis sativus L.
CsaV3_3G027010 Cucumis sativus L.
CSS0018545 Camellia sinensis var. sinensis
CSS0028265 Camellia sinensis var. sinensis
CSS0046291 Camellia sinensis var. sinensis
CSS0049323 Camellia sinensis var. sinensis
DCAR_000333 Daucus carota
DCAR_007006 Daucus carota
DCAR_011318 Daucus carota
DCAR_015101 Daucus carota
DCAR_031201 Daucus carota
Dinv10961 Davidia involucrata
Dinv33337 Davidia involucrata
Duzib147G1694 Durio zibethinus
Duzib187G0015 Durio zibethinus
Duzib248G1106 Durio zibethinus
Duzib264G0256 Durio zibethinus
Duzib268G1861 Durio zibethinus
ECA234G0690 Erigeron canadensis
ECA238G2490 Erigeron canadensis
ECA246G1523 Erigeron canadensis
ECA246G1873 Erigeron canadensis
Eucgr.I01647 Eucalyptus grandis
FAN02G2201 Fragaria x ananassa
FAN02G3701 Fragaria x ananassa
FAN05G3988 Fragaria x ananassa
FAN07G0637 Fragaria x ananassa
FAN09G1446 Fragaria x ananassa
FAN12G1168 Fragaria x ananassa
FAN17G2531 Fragaria x ananassa
FAN22G1798 Fragaria x ananassa
FvH4_4g23830 Fragaria vesca
FvH4_6g17110 Fragaria vesca
FvH4_6g53520 Fragaria vesca
Glyma.05G079100 Glycine max
Glyma.11G250100 Glycine max
Glyma.18G007000 Glycine max
Glyma.19G072000 Glycine max
Gohir.A03G126500 Gossypium hirsutum
Gohir.A05G338500 Gossypium hirsutum
Gohir.A09G035600 Gossypium hirsutum
Gohir.A09G190600 Gossypium hirsutum
Gohir.A10G072033 Gossypium hirsutum
Gohir.A10G072066 Gossypium hirsutum
Gohir.A10G157600 Gossypium hirsutum
Gohir.A10G166200 Gossypium hirsutum
Gohir.A13G135600 Gossypium hirsutum
Gohir.D02G149900 Gossypium hirsutum
Gohir.D04G076900 Gossypium hirsutum
Gohir.D09G036800 Gossypium hirsutum
Gohir.D10G079050 Gossypium hirsutum
Gorai.005G168100 Gossypium raimondii
Gorai.006G041900 Gossypium raimondii
Gorai.011G085900 Gossypium raimondii
Gorai.011G086000 Gossypium raimondii
Gorai.012G086800 Gossypium raimondii
GSVIVG01033094001 Vitis vinifera
HanXRQChr10g0297691 Helianthus annuus
HanXRQChr13g0422841 Helianthus annuus
HanXRQChr15g0474911 Helianthus annuus
HanXRQChr17g0540251 Helianthus annuus
HanXRQChr17g0550101 Helianthus annuus
HanXRQChr17g0569051 Helianthus annuus
Haze_12414 Corylus avellana
Haze_14875 Corylus avellana
Hma1.2p1_1278F.1_g272300 Hydrangea macrophylla
HPP92_008075 Vanilla planifolia
HPP92_021366 Vanilla planifolia
Hund04345 Selenicereus undatus
Lalb_Chr02g0157691 Lupinus albus
Lalb_Chr06g0174271 Lupinus albus
Lalb_Chr21g0317441 Lupinus albus
Lj1g0023883 Lotus japonicus
Lj2g0025333 Lotus japonicus
Lj6A826T50 Lonicera japonica
Lj7C609T11 Lonicera japonica
Lsat_1_v5_gn_0_25980 Lactuca sativa
Lsat_1_v5_gn_2_93020 Lactuca sativa
Lsat_1_v5_gn_3_29860 Lactuca sativa
Lsat_1_v5_gn_4_3340 Lactuca sativa
Manes.12G011900 Manihot esculenta
Manes.13G012600 Manihot esculenta
Manes.15G160900 Manihot esculenta
Manes.17G103300 Manihot esculenta
Mapoly0019s0069 Marchantia polymorpha
MD00G1139200 Malus domestica
MD09G1010900 Malus domestica
MD13G1118400 Malus domestica
MD16G1118500 Malus domestica
Medtr3g085410 Medicago truncatula
Medtr3g085420 Medicago truncatula
Medtr6g012540 Medicago truncatula
Medtr6g016250 Medicago truncatula
Medtr6g024140 Medicago truncatula
Medtr6g044560 Medicago truncatula
MELO3C010745.2 Cucumis melo
MELO3C014885.2 Cucumis melo
Migut.F00064 Erythranthe guttata
Migut.K01464 Erythranthe guttata
MSTRG.24096 Avicennia marina
MSTRG.3076 Avicennia marina
Nitab4.5_0000760g0110 Nicotiana tabacum
Nitab4.5_0002050g0160 Nicotiana tabacum
Nitab4.5_0003376g0040 Nicotiana tabacum
Nitab4.5_0010204g0030 Nicotiana tabacum
Nn3g16469 Nelumbo nucifera
Nn4g22337 Nelumbo nucifera
Oeu005103.1 Olea europaea
Oeu011748.2 Olea europaea
Os01g0921600 Oryza sativa ssp. japonica
Peaxi162Scf00128g01224 Petunia axillaris
Peaxi162Scf00420g00545 Petunia axillaris
Peaxi162Scf00881g00238 Petunia axillaris
PGR142G0095 Punica granatum
PGSC0003DMG400019117 Solanum tuberosum
PGSC0003DMG400020255 Solanum tuberosum
PGSC0003DMG401022140 Solanum tuberosum
PGSC0003DMG402022140 Solanum tuberosum
Phvul.001G261400 Phaseolus vulgaris
Phvul.004G072400 Phaseolus vulgaris
Phvul.006G138000 Phaseolus vulgaris
Potri.001G054900 Populus trichocarpa
Potri.001G330200 Populus trichocarpa
Potri.003G173400 Populus trichocarpa
Pp3c16_12940 Physcomitrium patens
Pp3c27_5800 Physcomitrium patens
PRCOL_00006824 Prasinoderma coloniale
Prupe.1G226600 Prunus persica
Prupe.3G306200 Prunus persica
Psat1g087680 Pisum sativum
Psat5g095480 Pisum sativum
Psat5g258840 Pisum sativum
PSO013G0322 Papaver somniferum
PSO017G4669 Papaver somniferum
PSO063G6739 Papaver somniferum
PSO170G1781 Papaver somniferum
PSO170G5331 Papaver somniferum
PSO478G1015 Papaver somniferum
PSO478G3911 Papaver somniferum
QL02p071435 Quercus lobata
QL03p052845 Quercus lobata
RcHm_v2.0_Chr2g0175551 Rosa chinensis
RcHm_v2.0_Chr4g0430391 Rosa chinensis
Rhsim08G0042900 Rhododendron simsii
Rhsim10G0006400 Rhododendron simsii
Sabra01G0039400 Salix brachista
Sabra03G0127000 Salix brachista
Sabra16G0211500 Salix brachista
SalBow4G1010 Salvia bowleyana
SalBow7G2550 Salvia bowleyana
Sc03g0006550 Simmondsia chinensis
Sed0000764 Sechium edule
Sed0003771 Sechium edule
Sed0006547 Sechium edule
Sed0027233 Sechium edule
SGA_v2.0_scaffold154G37174 Striga asiatica
SGA_v2.0_scaffold253G45195 Striga asiatica
SGA_v2.0_scaffold44G16913 Striga asiatica
SMO364G0804 Selaginella moellendorffii
SMO367G0282 Selaginella moellendorffii
Solyc02g068130.4 Solanum lycopersicum
Solyc02g094140.4 Solanum lycopersicum
Sopen02g017240 Solanum pennellii
Sopen02g038770 Solanum pennellii
Sp1g23620 Schrenkiella parvula
Sp2g16205 Schrenkiella parvula
Sp2g16210 Schrenkiella parvula
Sp7g01020 Schrenkiella parvula
TAR371G0703 Trochodendron aralioides
TAR374G0071 Trochodendron aralioides
TAR629G1629 Trochodendron aralioides
THA.LOC104807579 Tarenaya hassleriana
THA.LOC104825510 Tarenaya hassleriana
THA.LOC104825623 Tarenaya hassleriana
Thecc.02G209600 Theobroma cacao
Thecc.04G035900 Theobroma cacao
Thhalv10004935m.g Eutrema salsugineum
Thhalv10008785m.g Eutrema salsugineum
Thhalv10027942m.g Eutrema salsugineum
TPR.G15198 Trifolium pratense
TPR.G28276 Trifolium pratense
TWI18G0270 Tripterygium wilfordii
TWI36G0096 Tripterygium wilfordii
TWI36G0360 Tripterygium wilfordii
TWI36G0796 Tripterygium wilfordii
TWI36G0887 Tripterygium wilfordii
TWI36G0922 Tripterygium wilfordii
TWI36G1441 Tripterygium wilfordii
TWI75G0693 Tripterygium wilfordii
TWI81G0156 Tripterygium wilfordii
unitig_0.g1923 Utricularia gibba
unitig_748.g7074 Utricularia gibba
vmacro05957 Vaccinium macrocarpon
vmacro18344 Vaccinium macrocarpon
VMungo0464G0968 Vigna mungo
VMungo1383G0323 Vigna mungo
Zm00001eb143170 Zea mays
Zm00001eb161800 Zea mays
Zm00001eb364380 Zea mays

User provided reference genes

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