Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p10680 Brassica napus
A03p37200 Brassica napus
A05p37740 Brassica napus
A10p18510 Brassica napus
Aa31LG1G13240 Aethionema arabicum
Aa31LG3G4980 Aethionema arabicum
Actinidia06165 Actinidia chinensis
Actinidia07263 Actinidia chinensis
Actinidia07912 Actinidia chinensis
Actinidia24233 Actinidia chinensis
Ah.08g210280 Amaranthus hybridus
Ah.08g223170 Amaranthus hybridus
AL3G23140 Arabidopsis lyrata
AL6G33320 Arabidopsis lyrata
Aqoxy5G02981 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5JT16E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EMDZ87 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JB8XDC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KF5BEL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W44SME Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WD8FPH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WVDF4F Arachis hypogaea
AT3G11590 Arabidopsis thaliana
AT5G22310 Arabidopsis thaliana
ATR0582G134 Amborella trichopoda
ATR0810G001 Amborella trichopoda
Atru.chr3.3160 Acer truncatum
Atru.chr8.1431 Acer truncatum
Atru.chr8.1432 Acer truncatum
AUR62001529 Chenopodium quinoa
AUR62006251 Chenopodium quinoa
AUR62020253 Chenopodium quinoa
AUR62028494 Chenopodium quinoa
AUR62028500 Chenopodium quinoa
BcaB01g04716 Brassica carinata
BcaB04g18651 Brassica carinata
BcaB06g25604 Brassica carinata
BcaB08g36441 Brassica carinata
BcaC01g04101 Brassica carinata
BcaC01g06592 Brassica carinata
BcaC04g19564 Brassica carinata
BcaC05g29351 Brassica carinata
BolC3t13702H Brassica oleracea
BolC3t16767H Brassica oleracea
BolC5t34298H Brassica oleracea
BolC9t58302H Brassica oleracea
BraA03t10380Z Brassica rapa
BraA03t12879Z Brassica rapa
BraA05t22569Z Brassica rapa
BraA10t43931Z Brassica rapa
C03p12290 Brassica napus
C03p45060 Brassica napus
C05p56340 Brassica napus
C09p54340 Brassica napus
CAN.G423.40 Capsicum annuum
CAN.G745.21 Capsicum annuum
CAN.G841.11 Capsicum annuum
CAN.G919.42 Capsicum annuum
CANSAT54G0636 Cannabis sativa
CANSAT64G1671 Cannabis sativa
CARHR086140 Cardamine hirsuta
CARHR191240 Cardamine hirsuta
Carub.0003s1091 Capsella rubella
Carub.0006s2005 Capsella rubella
Ca_01644_v3 Cicer arietinum L.
Ca_09033_v3 Cicer arietinum L.
Ca_26074_v3 Cicer arietinum L.
Cc01_g08770 Coffea canephora
Cc06_g06280 Coffea canephora
CDE02G3986 Ceratophyllum demersum
CDE05G0017 Ceratophyllum demersum
CDE05G0404 Ceratophyllum demersum
Cfa009982 Carpinus fangiana
Cfa016653 Carpinus fangiana
Ciclev10011212m.g Citrus clementina
Ciclev10027982m.g Citrus clementina
CiPaw.10G013300 Carya illinoinensis
CiPaw.13G132800 Carya illinoinensis
ClCG02G022320 Citrullus lanatus
ClCG10G018640 Citrullus lanatus
COL.COLO4_29658 Corchorus olitorius
Cpa.g.sc104.85 Carica papaya
Cpa.g.sc195.33 Carica papaya
CsaV3_3G037590 Cucumis sativus L.
CsaV3_6G038440 Cucumis sativus L.
CSS0017230 Camellia sinensis var. sinensis
CSS0020708 Camellia sinensis var. sinensis
CSS0043220 Camellia sinensis var. sinensis
DCAR_010324 Daucus carota
DCAR_013420 Daucus carota
DCAR_020731 Daucus carota
DCAR_025644 Daucus carota
Dinv08919 Davidia involucrata
Dinv21153 Davidia involucrata
Dinv22809 Davidia involucrata
Dinv31730 Davidia involucrata
Duzib093G1299 Durio zibethinus
Duzib106G1473 Durio zibethinus
Duzib128G1692 Durio zibethinus
Duzib150G0510 Durio zibethinus
Duzib168G0663 Durio zibethinus
Duzib170G0266 Durio zibethinus
ECA238G0086 Erigeron canadensis
ECA240G4737 Erigeron canadensis
EL10Ac7g16328 Beta vulgaris
EL10Ac7g16832 Beta vulgaris
Eucgr.A02622 Eucalyptus grandis
Eucgr.J00528 Eucalyptus grandis
Eucgr.J01566 Eucalyptus grandis
Eucgr.L02101 Eucalyptus grandis
Eucgr.L03499 Eucalyptus grandis
FAN02G0757 Fragaria x ananassa
FAN02G3312 Fragaria x ananassa
FAN03G2911 Fragaria x ananassa
FAN05G0858 Fragaria x ananassa
FAN05G0934 Fragaria x ananassa
FAN05G1549 Fragaria x ananassa
FAN09G1971 Fragaria x ananassa
FAN11G1280 Fragaria x ananassa
FAN14G2633 Fragaria x ananassa
FAN16G1218 Fragaria x ananassa
FAN21G1297 Fragaria x ananassa
FAN25G0943 Fragaria x ananassa
FvH4_3g25790 Fragaria vesca
FvH4_6g19640 Fragaria vesca
Glyma.03G199500 Glycine max
Glyma.11G181000 Glycine max
Glyma.12G092200 Glycine max
Glyma.19G196800 Glycine max
Gohir.A04G060700 Gossypium hirsutum
Gohir.A05G079100 Gossypium hirsutum
Gohir.A07G111400 Gossypium hirsutum
Gohir.D04G095900 Gossypium hirsutum
Gohir.D05G082000 Gossypium hirsutum
Gohir.D07G115100 Gossypium hirsutum
Gorai.001G123300 Gossypium raimondii
Gorai.009G083600 Gossypium raimondii
Gorai.009G398800 Gossypium raimondii
GSVIVG01033905001 Vitis vinifera
GSVIVG01036076001 Vitis vinifera
HanXRQChr03g0091491 Helianthus annuus
HanXRQChr04g0100281 Helianthus annuus
HanXRQChr04g0119651 Helianthus annuus
HanXRQChr13g0420421 Helianthus annuus
Haze_19663 Corylus avellana
Haze_23341 Corylus avellana
Hma1.2p1_0245F.1_g101560 Hydrangea macrophylla
Hma1.2p1_0956F.1_g241300 Hydrangea macrophylla
Hma1.2p1_1724F.1_g299420 Hydrangea macrophylla
HPP92_025085 Vanilla planifolia
Hund03887 Selenicereus undatus
Hund18779 Selenicereus undatus
Hund19878 Selenicereus undatus
Hund20936 Selenicereus undatus
Lalb_Chr01g0004951 Lupinus albus
Lalb_Chr03g0028291 Lupinus albus
Lalb_Chr19g0136341 Lupinus albus
Lalb_Chr19g0136351 Lupinus albus
Lalb_Chr20g0111531 Lupinus albus
Lalb_Chr24g0393461 Lupinus albus
Lj1A258G37 Lonicera japonica
Lj1g0025805 Lotus japonicus
Lj2C145T7 Lonicera japonica
Lj3g0006955 Lotus japonicus
Lj3g0008777 Lotus japonicus
Lsat_1_v5_gn_2_54721 Lactuca sativa
Lsat_1_v5_gn_3_117261 Lactuca sativa
Manes.04G000800 Manihot esculenta
Manes.08G029400 Manihot esculenta
Manes.09G051100 Manihot esculenta
Manes.11G164600 Manihot esculenta
MBI07_g42012_MAGBIO Magnolia biondii
MBI11_g23194_MAGBIO Magnolia biondii
MD03G1150600 Malus domestica
MD11G1170000 Malus domestica
MD12G1032300 Malus domestica
MD14G1032400 Malus domestica
Medtr2g086890 Medicago truncatula
Medtr4g052400 Medicago truncatula
Medtr7g105430 Medicago truncatula
MELO3C009502.2 Cucumis melo
MELO3C014508.2 Cucumis melo
Migut.D02408 Erythranthe guttata
Migut.D02427 Erythranthe guttata
Migut.J00666 Erythranthe guttata
Migut.L01809 Erythranthe guttata
MSTRG.17697 Avicennia marina
MSTRG.18775 Avicennia marina
MSTRG.19285 Avicennia marina
MSTRG.21026 Avicennia marina
MSTRG.26620 Avicennia marina
MSTRG.5874 Avicennia marina
Nitab4.5_0001135g0010 Nicotiana tabacum
Nitab4.5_0001801g0040 Nicotiana tabacum
Nitab4.5_0002706g0060 Nicotiana tabacum
Nitab4.5_0005203g0050 Nicotiana tabacum
Nitab4.5_0005472g0020 Nicotiana tabacum
Nitab4.5_0013218g0010 Nicotiana tabacum
Nitab4.5_0023753g0010 Nicotiana tabacum
Nitab4.5_0024070g0010 Nicotiana tabacum
Nn6g34794 Nelumbo nucifera
Oeu002355.1 Olea europaea
Oeu007206.2 Olea europaea
Oeu009301.1 Olea europaea
Oeu048858.1 Olea europaea
Oeu051600.3 Olea europaea
Os02g0506100 Oryza sativa ssp. japonica
Os04g0382800 Oryza sativa ssp. japonica
Peaxi162Scf00096g01114 Petunia axillaris
Peaxi162Scf00224g00411 Petunia axillaris
PGR119G1567 Punica granatum
PGR142G1754 Punica granatum
PGSC0003DMG400005891 Solanum tuberosum
PGSC0003DMG400026345 Solanum tuberosum
PGSC0003DMG400028158 Solanum tuberosum
Phvul.001G193300 Phaseolus vulgaris
Phvul.011G096600 Phaseolus vulgaris
Potri.004G199500 Populus trichocarpa
Potri.006G207800 Populus trichocarpa
Potri.009G160900 Populus trichocarpa
Potri.016G074300 Populus trichocarpa
Pp3c15_16300 Physcomitrium patens
Pp3c21_16690 Physcomitrium patens
Pp3c9_16460 Physcomitrium patens
Prupe.6G137500 Prunus persica
Prupe.7G100300 Prunus persica
Psat3g030800 Pisum sativum
Psat5g259560 Pisum sativum
Psat7g186720 Pisum sativum
PSO017G0972 Papaver somniferum
PSO017G3861 Papaver somniferum
PSO675G5394 Papaver somniferum
PSO837G0005 Papaver somniferum
QL01p011779 Quercus lobata
QL07p038003 Quercus lobata
QL93p1999_0036 Quercus lobata
RcHm_v2.0_Chr3g0474981 Rosa chinensis
RcHm_v2.0_Chr5g0047011 Rosa chinensis
Rhsim04G0129700 Rhododendron simsii
Sabra04G0134700 Salix brachista
Sabra06G0159900 Salix brachista
Sabra09G0125900 Salix brachista
Sabra16G0076900 Salix brachista
Sabra16G0080000 Salix brachista
SalBow1G2522 Salvia bowleyana
SalBow1G5493 Salvia bowleyana
SalBow3G2449 Salvia bowleyana
SalBow5G4975 Salvia bowleyana
SalBow6G1177 Salvia bowleyana
Sc12g0004690 Simmondsia chinensis
Sc20g0006510 Simmondsia chinensis
Sc21g0006940 Simmondsia chinensis
Sed0005107 Sechium edule
Sed0015904 Sechium edule
Sed0020939 Sechium edule
SEGI_00451 Sequoiadendron giganteum
SEGI_20503 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31952 Striga asiatica
SGA_v2.0_scaffold7G03994 Striga asiatica
Solyc06g074190.3 Solanum lycopersicum
Solyc10g083190.3 Solanum lycopersicum
Solyc11g068720.2 Solanum lycopersicum
Sopen06g030610 Solanum pennellii
Sopen10g032670 Solanum pennellii
Sopen11g027430 Solanum pennellii
Sp3g09830 Schrenkiella parvula
Sp6g22930 Schrenkiella parvula
TAR623G0514 Trochodendron aralioides
TAR633G1586 Trochodendron aralioides
TAR636G1826 Trochodendron aralioides
THA.LOC104810928 Tarenaya hassleriana
THA.LOC104816606 Tarenaya hassleriana
Thecc.05G097100 Theobroma cacao
Thecc.09G277700 Theobroma cacao
Thhalv10013403m.g Eutrema salsugineum
Thhalv10020297m.g Eutrema salsugineum
TPR.G17198 Trifolium pratense
TPR.G23357 Trifolium pratense
TPR.G4543 Trifolium pratense
TWI31G1038 Tripterygium wilfordii
TWI53G1033 Tripterygium wilfordii
TWI77G0898 Tripterygium wilfordii
TWI79G0379 Tripterygium wilfordii
unitig_578.g16370 Utricularia gibba
unitig_746.g26608 Utricularia gibba
unitig_749.g14305 Utricularia gibba
vmacro08842 Vaccinium macrocarpon
VMungo1127G1539 Vigna mungo
VMungo1383G1918 Vigna mungo
Zm00001eb085630 Zea mays
Zm00001eb241630 Zea mays
Zm00001eb420940 Zea mays

User provided reference genes

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