Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p15420 Brassica napus
A03p15430 Brassica napus
A03p15450 Brassica napus
A03p15460 Brassica napus
A10p10530 Brassica napus
A10p10540 Brassica napus
Aa31LG3G9420 Aethionema arabicum
Aa31LG3G9430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3658 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5884 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5887 Anthoceros agrestis
Actinidia03176 Actinidia chinensis
Actinidia06142 Actinidia chinensis
Actinidia08660 Actinidia chinensis
Actinidia08661 Actinidia chinensis
Actinidia08663 Actinidia chinensis
Actinidia34230 Actinidia chinensis
Ah.07g205530 Amaranthus hybridus
Ah.13g070360 Amaranthus hybridus
AL8G27670 Arabidopsis lyrata
AL8G27680 Arabidopsis lyrata
Aqoxy3G03743 Aquilegia oxysepala
Aqoxy5G04246 Aquilegia oxysepala
Aqoxy6G02068 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4T5RFS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84THGE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CGD4UQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FPLI9C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9F3KZ Arachis hypogaea
AT5G53045 Arabidopsis thaliana
AT5G53050 Arabidopsis thaliana
ATR0602G202 Amborella trichopoda
ATR0602G226 Amborella trichopoda
ATR1127G174 Amborella trichopoda
Atru.chr1.2784 Acer truncatum
Atru.chr12.2238 Acer truncatum
AUR62006081 Chenopodium quinoa
AUR62006082 Chenopodium quinoa
AUR62019412 Chenopodium quinoa
AUR62019413 Chenopodium quinoa
BcaB01g04217 Brassica carinata
BcaB01g04219 Brassica carinata
BcaB08g35664 Brassica carinata
BcaB08g35665 Brassica carinata
BcaC01g06216 Brassica carinata
BcaC01g06217 Brassica carinata
BcaC04g20512 Brassica carinata
BcaC04g20513 Brassica carinata
BolC3t14206H Brassica oleracea
BolC3t14207H Brassica oleracea
BolC9t57151H Brassica oleracea
BolC9t57152H Brassica oleracea
BraA03t10832Z Brassica rapa
BraA03t10833Z Brassica rapa
BraA03t10835Z Brassica rapa
BraA03t10836Z Brassica rapa
BraA03t10837Z Brassica rapa
BraA03t10838Z Brassica rapa
BraA03t10841Z Brassica rapa
BraA10t43137Z Brassica rapa
BraA10t43138Z Brassica rapa
C03p18010 Brassica napus
C03p18020 Brassica napus
C09p42750 Brassica napus
C09p42760 Brassica napus
CAN.G481.25 Capsicum annuum
CAN.G481.26 Capsicum annuum
CANSAT21G2118 Cannabis sativa
CANSAT21G2187 Cannabis sativa
CARHR266060 Cardamine hirsuta
CARHR266070 Cardamine hirsuta
Carub.0008s1324 Capsella rubella
Carub.0008s1325 Capsella rubella
Ca_12784_v3 Cicer arietinum L.
Ca_12788_v3 Cicer arietinum L.
CBR_g39074 Chara braunii
CBR_g50381 Chara braunii
CBR_g52250 Chara braunii
Cc02_g01380 Coffea canephora
Cc02_g01390 Coffea canephora
CDE03G0170 Ceratophyllum demersum
CDE03G0512 Ceratophyllum demersum
CDE04G0267 Ceratophyllum demersum
CDE11G0760 Ceratophyllum demersum
Cfa016242 Carpinus fangiana
Cfa016243 Carpinus fangiana
Ciclev10020415m.g Citrus clementina
Ciclev10023204m.g Citrus clementina
Ciclev10023496m.g Citrus clementina
Ciclev10023672m.g Citrus clementina
Ciclev10023844m.g Citrus clementina
Ciclev10024526m.g Citrus clementina
CiPaw.05G197900 Carya illinoinensis
CiPaw.05G198100 Carya illinoinensis
CiPaw.06G045200 Carya illinoinensis
ClCG01G000390 Citrullus lanatus
ClCG05G009020 Citrullus lanatus
COL.COLO4_16787 Corchorus olitorius
COL.COLO4_16788 Corchorus olitorius
Cpa.g.sc3.100 Carica papaya
Cre02.g077451 Chlamydomonas reinhardtii
Cre11.g481250 Chlamydomonas reinhardtii
CsaV3_3G019760 Cucumis sativus L.
CsaV3_5G000460 Cucumis sativus L.
CSS0003606 Camellia sinensis var. sinensis
CSS0036676 Camellia sinensis var. sinensis
CSS0043540 Camellia sinensis var. sinensis
CSS0043767 Camellia sinensis var. sinensis
DCAR_008946 Daucus carota
DCAR_020335 Daucus carota
Dinv29264 Davidia involucrata
Dinv29265 Davidia involucrata
Dinv35345 Davidia involucrata
Duzib068G0867 Durio zibethinus
Duzib084G0543 Durio zibethinus
Duzib084G1054 Durio zibethinus
Duzib205G1406 Durio zibethinus
ECA232G1226 Erigeron canadensis
ECA232G4612 Erigeron canadensis
EL10Ac3g05270 Beta vulgaris
EL10Ac3g05271 Beta vulgaris
Eucgr.A01449 Eucalyptus grandis
Eucgr.K00393 Eucalyptus grandis
Eucgr.K00394 Eucalyptus grandis
FAN01G0065 Fragaria x ananassa
FAN03G1878 Fragaria x ananassa
FAN06G3491 Fragaria x ananassa
FAN06G4818 Fragaria x ananassa
FAN10G0091 Fragaria x ananassa
FAN10G1840 Fragaria x ananassa
FAN10G2791 Fragaria x ananassa
FAN10G3342 Fragaria x ananassa
FvH4_7g31970 Fragaria vesca
FvH4_7g31980 Fragaria vesca
Glyma.11G174073 Glycine max
Glyma.14G130501 Glycine max
Glyma.14G131800 Glycine max
Glyma.14G162400 Glycine max
Glyma.17G200500 Glycine max
Glyma.19G065800 Glycine max
Gohir.A09G184900 Gossypium hirsutum
Gohir.A12G249000 Gossypium hirsutum
Gohir.D09G179800 Gossypium hirsutum
Gohir.D12G249800 Gossypium hirsutum
Gorai.006G201800 Gossypium raimondii
Gorai.008G267900 Gossypium raimondii
GSVIVG01038565001 Vitis vinifera
GSVIVG01038567001 Vitis vinifera
HanXRQChr04g0100471 Helianthus annuus
HanXRQChr15g0485691 Helianthus annuus
HanXRQChr15g0485701 Helianthus annuus
Haze_00198 Corylus avellana
Hma1.2p1_1587F.1_g292250 Hydrangea macrophylla
HPP92_010499 Vanilla planifolia
HPP92_020719 Vanilla planifolia
Hund11652 Selenicereus undatus
Hund11654 Selenicereus undatus
Hund21009 Selenicereus undatus
Lalb_Chr01g0013731 Lupinus albus
Lalb_Chr11g0066981 Lupinus albus
Lj1g0011159 Lotus japonicus
Lj1g0020624 Lotus japonicus
Lj3C903G5 Lonicera japonica
Lj3C903G6 Lonicera japonica
Lj6g0020019 Lotus japonicus
Lsat_1_v5_gn_2_136261 Lactuca sativa
Lsat_1_v5_gn_7_80100 Lactuca sativa
Lsat_1_v5_gn_8_5361 Lactuca sativa
Lsat_1_v5_gn_9_49781 Lactuca sativa
Lsat_1_v5_gn_9_49801 Lactuca sativa
Manes.01G185000 Manihot esculenta
Manes.05G190300 Manihot esculenta
Manes.05G190400 Manihot esculenta
Mapoly0129s0038 Marchantia polymorpha
Mapoly0155s0003 Marchantia polymorpha
MBI06_g36471_MAGBIO Magnolia biondii
MBI06_g46366_MAGBIO Magnolia biondii
MBI07_g24774_MAGBIO Magnolia biondii
MD01G1222500 Malus domestica
MD01G1222600 Malus domestica
MD07G1293100 Malus domestica
MD07G1293200 Malus domestica
Medtr1g007860 Medicago truncatula
Medtr1g007870 Medicago truncatula
Medtr3g091850 Medicago truncatula
MELO3C005890.2 Cucumis melo
MELO3C008504.2 Cucumis melo
Migut.F00200 Erythranthe guttata
Migut.F00201 Erythranthe guttata
MSTRG.8645 Avicennia marina
Nitab4.5_0000548g0060 Nicotiana tabacum
Nitab4.5_0000548g0070 Nicotiana tabacum
Nitab4.5_0005491g0070 Nicotiana tabacum
Nn1g00292 Nelumbo nucifera
Nn3g18949 Nelumbo nucifera
Nn3g18952 Nelumbo nucifera
Nn8g40946 Nelumbo nucifera
Oeu037052.1 Olea europaea
Oeu037053.1 Olea europaea
Oeu053931.1 Olea europaea
Oeu060994.1 Olea europaea
Os02g0305800 Oryza sativa ssp. japonica
Os02g0306250 Oryza sativa ssp. japonica
Os05g0542200 Oryza sativa ssp. japonica
Os08g0534400 Oryza sativa ssp. japonica
Peaxi162Scf00740g00131 Petunia axillaris
Peaxi162Scf00740g00143 Petunia axillaris
PGR042G0827 Punica granatum
PGR042G2650 Punica granatum
PGR142G2770 Punica granatum
PGSC0003DMG401018530 Solanum tuberosum
PGSC0003DMG402018530 Solanum tuberosum
Phvul.001G057400 Phaseolus vulgaris
Phvul.001G075000 Phaseolus vulgaris
Potri.012G017000 Populus trichocarpa
Potri.012G017100 Populus trichocarpa
Potri.015G011300 Populus trichocarpa
Potri.015G011500 Populus trichocarpa
Pp3c15_21670 Physcomitrium patens
Pp3c16_15200 Physcomitrium patens
Pp3c4_28770 Physcomitrium patens
PRCOL_00002303 Prasinoderma coloniale
Prupe.2G312900 Prunus persica
Prupe.2G313000 Prunus persica
Psat5g075320 Pisum sativum
Psat6g034920 Pisum sativum
Psat6g034960 Pisum sativum
PSO135G0144 Papaver somniferum
PSO135G0367 Papaver somniferum
PSO170G5717 Papaver somniferum
PSO384G1073 Papaver somniferum
PSO384G3554 Papaver somniferum
PSO782G0677 Papaver somniferum
QL05p052295 Quercus lobata
QL09p008623 Quercus lobata
QL09p008635 Quercus lobata
RcHm_v2.0_Chr1g0381471 Rosa chinensis
RcHm_v2.0_Chr1g0381481 Rosa chinensis
Rhsim03G0209800 Rhododendron simsii
Rhsim03G0210000 Rhododendron simsii
Rhsim03G0210100 Rhododendron simsii
Rhsim09G0206300 Rhododendron simsii
Rhsim09G0206400 Rhododendron simsii
Sabra12G0015300 Salix brachista
Sabra12G0015400 Salix brachista
Sabra15G0009300 Salix brachista
Sabra15G0009400 Salix brachista
SalBow4G3229 Salvia bowleyana
Sc13g0009850 Simmondsia chinensis
Sc13g0009860 Simmondsia chinensis
Sed0009393 Sechium edule
Sed0011455 Sechium edule
Sed0012841 Sechium edule
SEGI_03713 Sequoiadendron giganteum
SEGI_09966 Sequoiadendron giganteum
SEGI_13792 Sequoiadendron giganteum
SEGI_37240 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16812 Striga asiatica
SHI02360 Sapria himalayana
SMO147G0069 Selaginella moellendorffii
SMO351G0263 Selaginella moellendorffii
Solyc03g083010.3 Solanum lycopersicum
Solyc03g083020.3 Solanum lycopersicum
Sopen03g022820 Solanum pennellii
Sopen03g022830 Solanum pennellii
Sp6g15200 Schrenkiella parvula
Sp6g15210 Schrenkiella parvula
Sp7g25780 Schrenkiella parvula
TAR629G2756 Trochodendron aralioides
THA.LOC104799971 Tarenaya hassleriana
THA.LOC104803913 Tarenaya hassleriana
THA.LOC104825151 Tarenaya hassleriana
Thecc.03G200700 Theobroma cacao
Thecc.03G200900 Theobroma cacao
Thhalv10013609m.g Eutrema salsugineum
Thhalv10015123m.g Eutrema salsugineum
Thhalv10022935m.g Eutrema salsugineum
TPR.G12084 Trifolium pratense
TPR.G33626 Trifolium pratense
TPR.G40491 Trifolium pratense
TWI14G0402 Tripterygium wilfordii
TWI39G0548 Tripterygium wilfordii
TWI39G0647 Tripterygium wilfordii
unitig_748.g7291 Utricularia gibba
unitig_8.g4777 Utricularia gibba
vmacro06392 Vaccinium macrocarpon
vmacro10128 Vaccinium macrocarpon
vmacro10129 Vaccinium macrocarpon
VMungo0647G0954 Vigna mungo
VMungo0647G1725 Vigna mungo
Zm00001eb152100 Zea mays
Zm00001eb294430 Zea mays
Zm00001eb342430 Zea mays

User provided reference genes

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