Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15870 Brassica napus
A04p08330 Brassica napus
A07p08530 Brassica napus
Aa31LG4G9610 Aethionema arabicum
Aa31LG9G3700 Aethionema arabicum
Actinidia11453 Actinidia chinensis
Actinidia28993 Actinidia chinensis
Actinidia35844 Actinidia chinensis
Ah.05g171300 Amaranthus hybridus
Ah.13g077990 Amaranthus hybridus
AL3G38830 Arabidopsis lyrata
AL520U10010 Arabidopsis lyrata
AL7G28710 Arabidopsis lyrata
AL7G42680 Arabidopsis lyrata
Aqoxy2G03941 Aquilegia oxysepala
Aqoxy5G01373 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0N85F7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1M0UFP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K5F7Q0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KET370 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SWLP8S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZI6CNN Arachis hypogaea
AT3G23840 Arabidopsis thaliana
AT4G13840 Arabidopsis thaliana
AT4G24510 Arabidopsis thaliana
ATR0767G164 Amborella trichopoda
Atru.chr13.1004 Acer truncatum
Atru.chr2.546 Acer truncatum
AUR62014351 Chenopodium quinoa
AUR62014352 Chenopodium quinoa
AUR62018561 Chenopodium quinoa
AUR62019094 Chenopodium quinoa
AUR62019095 Chenopodium quinoa
AUR62020858 Chenopodium quinoa
AUR62043528 Chenopodium quinoa
AUR62043529 Chenopodium quinoa
BcaB02g08648 Brassica carinata
BcaB04g20417 Brassica carinata
BcaB06g26549 Brassica carinata
BcaC02g09382 Brassica carinata
BcaC06g35579 Brassica carinata
BcaC06g35582 Brassica carinata
BcaC09g50861 Brassica carinata
BolC1t01909H Brassica oleracea
BolC4t25787H Brassica oleracea
BolC7t41818H Brassica oleracea
BolC7t41824H Brassica oleracea
BraA01t01521Z Brassica rapa
BraA04t16520Z Brassica rapa
BraA07t28637Z Brassica rapa
C01p19810 Brassica napus
C01p22620 Brassica napus
C04p42010 Brassica napus
C04p42020 Brassica napus
C07p13260 Brassica napus
C07p13300 Brassica napus
CAN.G1155.24 Capsicum annuum
CANSAT54G2437 Cannabis sativa
CANSAT78G0308 Cannabis sativa
CANSAT78G2371 Cannabis sativa
CARHR099840 Cardamine hirsuta
CARHR219750 Cardamine hirsuta
CARHR231900 Cardamine hirsuta
Carub.0003s2415 Capsella rubella
Carub.0003s2416 Capsella rubella
Carub.0007s1656 Capsella rubella
Carub.0007s2860 Capsella rubella
Ca_17980_v3 Cicer arietinum L.
Cc03_g08410 Coffea canephora
Cc10_g15940 Coffea canephora
CDE04G2779 Ceratophyllum demersum
CDE07G0899 Ceratophyllum demersum
Cfa013802 Carpinus fangiana
Cfa014957 Carpinus fangiana
Ciclev10001068m.g Citrus clementina
Ciclev10005028m.g Citrus clementina
CiPaw.01G117400 Carya illinoinensis
CiPaw.02G064800 Carya illinoinensis
CiPaw.07G164900 Carya illinoinensis
CiPaw.08G056000 Carya illinoinensis
ClCG06G007980 Citrullus lanatus
ClCG11G014610 Citrullus lanatus
COL.COLO4_20220 Corchorus olitorius
COL.COLO4_35253 Corchorus olitorius
Cpa.g.sc83.44 Carica papaya
CsaV3_2G011770 Cucumis sativus L.
CsaV3_3G048020 Cucumis sativus L.
CSS0002667 Camellia sinensis var. sinensis
CSS0047836 Camellia sinensis var. sinensis
DCAR_019316 Daucus carota
DCAR_024540 Daucus carota
DCAR_024541 Daucus carota
Dinv27205 Davidia involucrata
Dinv42607 Davidia involucrata
Duzib151G0380 Durio zibethinus
ECA238G0453 Erigeron canadensis
ECA248G3632 Erigeron canadensis
EL10Ac1g00991 Beta vulgaris
EL10Ac3g07459 Beta vulgaris
Eucgr.F00422 Eucalyptus grandis
Eucgr.F00425 Eucalyptus grandis
Eucgr.H02688 Eucalyptus grandis
FAN01G3101 Fragaria x ananassa
FAN02G1036 Fragaria x ananassa
FAN02G4115 Fragaria x ananassa
FAN03G1475 Fragaria x ananassa
FAN04G1405 Fragaria x ananassa
FAN04G3071 Fragaria x ananassa
FAN07G0913 Fragaria x ananassa
FAN08G1422 Fragaria x ananassa
FAN08G1423 Fragaria x ananassa
FAN08G1968 Fragaria x ananassa
FAN08G2049 Fragaria x ananassa
FAN09G4863 Fragaria x ananassa
FAN12G1610 Fragaria x ananassa
FAN13G0025 Fragaria x ananassa
FAN13G0131 Fragaria x ananassa
FAN13G2416 Fragaria x ananassa
FAN14G0855 Fragaria x ananassa
FAN15G1747 Fragaria x ananassa
FAN17G1286 Fragaria x ananassa
FAN18G1051 Fragaria x ananassa
FAN18G1983 Fragaria x ananassa
FAN18G3008 Fragaria x ananassa
FAN21G1124 Fragaria x ananassa
FAN22G1159 Fragaria x ananassa
FAN25G3731 Fragaria x ananassa
FvH4_4g13360 Fragaria vesca
FvH4_5g34840 Fragaria vesca
FvH4_5g34850 Fragaria vesca
Glyma.02G214900 Glycine max
Glyma.05G152500 Glycine max
Glyma.06G097300 Glycine max
Glyma.08G110000 Glycine max
Gohir.A01G126200 Gossypium hirsutum
Gohir.A05G322900 Gossypium hirsutum
Gohir.D01G113800 Gossypium hirsutum
Gohir.D05G325600 Gossypium hirsutum
Gorai.002G138800 Gossypium raimondii
Gorai.009G349800 Gossypium raimondii
GSVIVG01009186001 Vitis vinifera
GSVIVG01021019001 Vitis vinifera
HanXRQChr01g0022181 Helianthus annuus
HanXRQChr11g0344311 Helianthus annuus
HanXRQChr14g0435811 Helianthus annuus
Haze_11647 Corylus avellana
Haze_11648 Corylus avellana
Haze_22465 Corylus avellana
Hma1.2p1_0125F.1_g058770 Hydrangea macrophylla
Hma1.2p1_0349F.1_g132200 Hydrangea macrophylla
HPP92_013196 Vanilla planifolia
Hund17278 Selenicereus undatus
Hund19005 Selenicereus undatus
Hund24409 Selenicereus undatus
Lalb_Chr11g0064921 Lupinus albus
Lalb_Chr11g0064931 Lupinus albus
Lalb_Chr12g0205601 Lupinus albus
Lalb_Chr13g0294861 Lupinus albus
Lalb_Chr17g0344571 Lupinus albus
Lalb_Chr23g0270021 Lupinus albus
Lj4A88T35 Lonicera japonica
Lj4g0015912 Lotus japonicus
Lj5g0011660 Lotus japonicus
Lj6A384T15 Lonicera japonica
Lsat_1_v5_gn_1_70500 Lactuca sativa
Lsat_1_v5_gn_1_70520 Lactuca sativa
Lsat_1_v5_gn_1_70540 Lactuca sativa
Lsat_1_v5_gn_1_73320 Lactuca sativa
Lsat_1_v5_gn_1_73400 Lactuca sativa
Lsat_1_v5_gn_1_76201 Lactuca sativa
Lsat_1_v5_gn_2_47140 Lactuca sativa
Lsat_1_v5_gn_2_47181 Lactuca sativa
Lsat_1_v5_gn_2_47300 Lactuca sativa
Lsat_1_v5_gn_6_106421 Lactuca sativa
Manes.02G144500 Manihot esculenta
Manes.03G144700 Manihot esculenta
MBI16_g12472_MAGBIO Magnolia biondii
MBI16_g19589_MAGBIO Magnolia biondii
MBI16_g19590_MAGBIO Magnolia biondii
MBI16_g27569_MAGBIO Magnolia biondii
MD04G1016700 Malus domestica
MD04G1016900 Malus domestica
MD08G1199200 Malus domestica
MD08G1199300 Malus domestica
MD15G1386300 Malus domestica
MD15G1386800 Malus domestica
Medtr1g035890 Medicago truncatula
Medtr2g036780 Medicago truncatula
Medtr3g100150 Medicago truncatula
Medtr8g081480 Medicago truncatula
Medtr8g081600 Medicago truncatula
MELO3C003520.2 Cucumis melo
MELO3C020426.2 Cucumis melo
Migut.N00418 Erythranthe guttata
Migut.N02842 Erythranthe guttata
Migut.N02846 Erythranthe guttata
MSTRG.4242 Avicennia marina
Nitab4.5_0000354g0130 Nicotiana tabacum
Nitab4.5_0000697g0100 Nicotiana tabacum
Nitab4.5_0002223g0080 Nicotiana tabacum
Nitab4.5_0002223g0090 Nicotiana tabacum
Nitab4.5_0005065g0020 Nicotiana tabacum
Nn1g05591 Nelumbo nucifera
Nn1g08203 Nelumbo nucifera
Nn5g29869 Nelumbo nucifera
Oeu056422.1 Olea europaea
Oeu063465.1 Olea europaea
Os04g0611200 Oryza sativa ssp. japonica
Peaxi162Scf00047g00128 Petunia axillaris
Peaxi162Scf00160g01037 Petunia axillaris
PGR042G3778 Punica granatum
PGR083G0461 Punica granatum
PGSC0003DMG400002049 Solanum tuberosum
PGSC0003DMG400024362 Solanum tuberosum
Phvul.003G050600 Phaseolus vulgaris
Phvul.008G182300 Phaseolus vulgaris
Potri.001G319200 Populus trichocarpa
Potri.005G153600 Populus trichocarpa
Prupe.1G163500 Prunus persica
Prupe.1G533000 Prunus persica
Psat5g049120 Pisum sativum
Psat5g049160 Pisum sativum
Psat7g074800 Pisum sativum
PSO017G0403 Papaver somniferum
PSO017G0447 Papaver somniferum
PSO063G0938 Papaver somniferum
PSO063G3524 Papaver somniferum
PSO170G2422 Papaver somniferum
PSO210G1594 Papaver somniferum
QL06p026179 Quercus lobata
QL09p017898 Quercus lobata
RcHm_v2.0_Chr1g0364531 Rosa chinensis
RcHm_v2.0_Chr4g0413701 Rosa chinensis
RcHm_v2.0_Chr4g0415781 Rosa chinensis
RcHm_v2.0_Chr7g0232591 Rosa chinensis
RcHm_v2.0_Chr7g0235521 Rosa chinensis
RcHm_v2.0_Chr7g0235551 Rosa chinensis
RcHm_v2.0_Chr7g0235561 Rosa chinensis
RcHm_v2.0_Chr7g0235611 Rosa chinensis
RcHm_v2.0_Chr7g0235721 Rosa chinensis
RcHm_v2.0_Chr7g0235771 Rosa chinensis
Rhsim02G0061400 Rhododendron simsii
Rhsim02G0061500 Rhododendron simsii
Rhsim06G0071400 Rhododendron simsii
RhsimUnG0062100 Rhododendron simsii
RhsimUnG0062300 Rhododendron simsii
Sabra16G0202100 Salix brachista
Sabra16G0202800 Salix brachista
SalBow2G2115 Salvia bowleyana
SalBow3G3285 Salvia bowleyana
SalBow8G3856 Salvia bowleyana
SalBow8G4613 Salvia bowleyana
Sc25g0005810 Simmondsia chinensis
Sed0009765 Sechium edule
Sed0015532 Sechium edule
SEGI_08413 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12581 Striga asiatica
SGA_v2.0_scaffold48G17857 Striga asiatica
SGA_v2.0_scaffold48G17858 Striga asiatica
SMO137G0107 Selaginella moellendorffii
Solyc09g092270.3 Solanum lycopersicum
Solyc12g087980.3 Solanum lycopersicum
Sopen00g010110 Solanum pennellii
Sopen09g035200 Solanum pennellii
Sopen12g030010 Solanum pennellii
Sp3g21560 Schrenkiella parvula
Sp3g21570 Schrenkiella parvula
Sp7g11670 Schrenkiella parvula
Sp7g22500 Schrenkiella parvula
TAR628G1106 Trochodendron aralioides
THA.LOC104804802 Tarenaya hassleriana
THA.LOC104808698 Tarenaya hassleriana
THA.LOC104817110 Tarenaya hassleriana
Thecc.04G195800 Theobroma cacao
Thecc.08G071600 Theobroma cacao
Thhalv10002536m.g Eutrema salsugineum
Thhalv10025273m.g Eutrema salsugineum
Thhalv10025274m.g Eutrema salsugineum
TPR.G11863 Trifolium pratense
TPR.G11893 Trifolium pratense
TPR.G6345 Trifolium pratense
TPR.G7320 Trifolium pratense
TPR.G9023 Trifolium pratense
TWI36G0582 Tripterygium wilfordii
TWI73G0182 Tripterygium wilfordii
unitig_21.g20614 Utricularia gibba
unitig_8.g5000 Utricularia gibba
unitig_8.g5001 Utricularia gibba
vmacro00441 Vaccinium macrocarpon
vmacro15562 Vaccinium macrocarpon
VMungo0251G2167 Vigna mungo
VMungo0647G0304 Vigna mungo
Zm00001eb071110 Zea mays
Zm00001eb413860 Zea mays

User provided reference genes

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