Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19310 Brassica napus
A02p11080 Brassica napus
A03p34410 Brassica napus
A03p57580 Brassica napus
A03p57590 Brassica napus
Aa31LG3G9580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.690 Anthoceros agrestis
Actinidia03165 Actinidia chinensis
Actinidia06152 Actinidia chinensis
Actinidia08642 Actinidia chinensis
Actinidia33529 Actinidia chinensis
Actinidia34214 Actinidia chinensis
Ah.07g205780 Amaranthus hybridus
AL7G24740 Arabidopsis lyrata
AL8G28110 Arabidopsis lyrata
Aqoxy5G04244 Aquilegia oxysepala
Aqoxy7G00090 Aquilegia oxysepala
Aqoxy7G01343 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.858FVG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.REMA0B Arachis hypogaea
AT4G27890 Arabidopsis thaliana
AT5G53400 Arabidopsis thaliana
ATR0584G067 Amborella trichopoda
Atru.chr2.1742 Acer truncatum
AUR62006103 Chenopodium quinoa
AUR62019389 Chenopodium quinoa
AUR62042728 Chenopodium quinoa
BcaB05g22037 Brassica carinata
BcaB08g35707 Brassica carinata
BcaC01g04312 Brassica carinata
BcaC01g04315 Brassica carinata
BcaC01g06249 Brassica carinata
BcaC03g14426 Brassica carinata
BcaC04g20457 Brassica carinata
BcaC06g32656 Brassica carinata
BcaC09g50530 Brassica carinata
BcaNung01614 Brassica carinata
BcaNung05982 Brassica carinata
BolC1t02382H Brassica oleracea
BolC2t07979H Brassica oleracea
BolC3t16472H Brassica oleracea
BolC7t46058H Brassica oleracea
BolC7t46059H Brassica oleracea
BolC9t57204H Brassica oleracea
BraA01t01872Z Brassica rapa
BraA03t12617Z Brassica rapa
BraA03t14825Z Brassica rapa
BraA03t14826Z Brassica rapa
BraA10t43175Z Brassica rapa
C01p24260 Brassica napus
C03p41890 Brassica napus
C07p55800 Brassica napus
CAN.G1565.14 Capsicum annuum
CAN.G1565.15 Capsicum annuum
CAN.G1565.16 Capsicum annuum
CAN.G589.3 Capsicum annuum
CAN.G728.8 Capsicum annuum
CAN.G968.15 Capsicum annuum
CANSAT21G2592 Cannabis sativa
CARHR027440 Cardamine hirsuta
CARHR235590 Cardamine hirsuta
CARHR266530 Cardamine hirsuta
Carub.0007s1293 Capsella rubella
Carub.0008s1357 Capsella rubella
Ca_12807_v3 Cicer arietinum L.
CBR_g17150 Chara braunii
Cc02_g01640 Coffea canephora
Cc03_g08340 Coffea canephora
CDE02G3736 Ceratophyllum demersum
CDE08G0597 Ceratophyllum demersum
Cfa012575 Carpinus fangiana
Cfa012580 Carpinus fangiana
Cfa012602 Carpinus fangiana
Cfa016219 Carpinus fangiana
Ciclev10021271m.g Citrus clementina
CiPaw.05G251200 Carya illinoinensis
CiPaw.06G010400 Carya illinoinensis
CiPaw.11G102400 Carya illinoinensis
ClCG01G000450 Citrullus lanatus
COL.COLO4_11270 Corchorus olitorius
COL.COLO4_16864 Corchorus olitorius
COL.COLO4_16869 Corchorus olitorius
COL.COLO4_16870 Corchorus olitorius
COL.COLO4_23433 Corchorus olitorius
Cpa.g.sc3.79 Carica papaya
Cre07.g329600 Chlamydomonas reinhardtii
Cre13.g590400 Chlamydomonas reinhardtii
Cre17.g711650 Chlamydomonas reinhardtii
CsaV3_5G000520 Cucumis sativus L.
CSS0011717 Camellia sinensis var. sinensis
CSS0019974 Camellia sinensis var. sinensis
DCAR_008918 Daucus carota
DCAR_011762 Daucus carota
DCAR_014545 Daucus carota
DCAR_017882 Daucus carota
DCAR_020317 Daucus carota
Dinv29290 Davidia involucrata
Dinv35327 Davidia involucrata
Dinv35328 Davidia involucrata
Duzib068G0874 Durio zibethinus
Duzib205G0905 Durio zibethinus
Duzib205G1597 Durio zibethinus
ECA232G0598 Erigeron canadensis
EL10Ac3g05296 Beta vulgaris
Eucgr.A01460 Eucalyptus grandis
FAN01G2769 Fragaria x ananassa
FAN03G2233 Fragaria x ananassa
FAN06G0300 Fragaria x ananassa
FAN06G1535 Fragaria x ananassa
FAN06G1725 Fragaria x ananassa
FAN10G0592 Fragaria x ananassa
FAN10G1123 Fragaria x ananassa
FAN19G0337 Fragaria x ananassa
FAN19G1914 Fragaria x ananassa
FAN23G0330 Fragaria x ananassa
FAN23G0967 Fragaria x ananassa
FAN26G2309 Fragaria x ananassa
FAN26G2750 Fragaria x ananassa
FAN28G0722 Fragaria x ananassa
FAN28G2036 Fragaria x ananassa
FvH4_1g23100 Fragaria vesca
FvH4_1g24630 Fragaria vesca
FvH4_7g31690 Fragaria vesca
Glyma.04G236300 Glycine max
Glyma.06G128000 Glycine max
Glyma.08G305450 Glycine max
Gohir.A09G184400 Gossypium hirsutum
Gohir.A12G202600 Gossypium hirsutum
Gohir.A12G203600 Gossypium hirsutum
Gohir.A12G250300 Gossypium hirsutum
Gohir.D08G107440 Gossypium hirsutum
Gohir.D09G179200 Gossypium hirsutum
Gohir.D12G205300 Gossypium hirsutum
Gohir.D12G206028 Gossypium hirsutum
Gohir.D12G251100 Gossypium hirsutum
Gorai.004G111700 Gossypium raimondii
Gorai.006G201200 Gossypium raimondii
Gorai.008G220200 Gossypium raimondii
Gorai.008G221100 Gossypium raimondii
Gorai.008G269200 Gossypium raimondii
GSVIVG01038706001 Vitis vinifera
HanXRQChr01g0007131 Helianthus annuus
HanXRQChr09g0267241 Helianthus annuus
Haze_00223 Corylus avellana
Haze_08060 Corylus avellana
Haze_08077 Corylus avellana
Haze_26442 Corylus avellana
Hma1.2p1_0404F.1_g145460 Hydrangea macrophylla
HPP92_016906 Vanilla planifolia
Hund11668 Selenicereus undatus
Hund20996 Selenicereus undatus
Lalb_Chr08g0240281 Lupinus albus
Lalb_Chr11g0066831 Lupinus albus
Lj1C1016T2 Lonicera japonica
Lj1g0028241 Lotus japonicus
Lj3A906G58 Lonicera japonica
Lj8P624T48 Lonicera japonica
Lsat_1_v5_gn_9_56360 Lactuca sativa
Manes.06G160000 Manihot esculenta
Manes.06G160400 Manihot esculenta
Manes.14G006200 Manihot esculenta
Mapoly0030s0062 Marchantia polymorpha
MBI06_g08476_MAGBIO Magnolia biondii
MBI07_g07107_MAGBIO Magnolia biondii
MBI07_g29740_MAGBIO Magnolia biondii
MBI07_g46535_MAGBIO Magnolia biondii
MCO02G426 Micromonas commoda
MCO05G741 Micromonas commoda
MCO10G166 Micromonas commoda
MD01G1220500 Malus domestica
MD07G1289500 Malus domestica
MD17G1022700 Malus domestica
Medtr1g008170 Medicago truncatula
Medtr1g008195 Medicago truncatula
Medtr1g008200 Medicago truncatula
Medtr6g065550 Medicago truncatula
MELO3C005884.2 Cucumis melo
Migut.F00222 Erythranthe guttata
Migut.F01035 Erythranthe guttata
MSTRG.53 Avicennia marina
MSTRG.8519 Avicennia marina
MSTRG.8662 Avicennia marina
Nitab4.5_0000015g0370 Nicotiana tabacum
Nitab4.5_0000208g0080 Nicotiana tabacum
Nitab4.5_0000501g0080 Nicotiana tabacum
Nitab4.5_0000697g0010 Nicotiana tabacum
Nitab4.5_0001520g0050 Nicotiana tabacum
Nitab4.5_0001717g0010 Nicotiana tabacum
Nitab4.5_0004130g0020 Nicotiana tabacum
Nitab4.5_0007828g0010 Nicotiana tabacum
Nitab4.5_0009776g0010 Nicotiana tabacum
Nn3g18999 Nelumbo nucifera
Oeu022749.1 Olea europaea
Oeu030286.1 Olea europaea
Oeu046104.1 Olea europaea
Oeu059297.1 Olea europaea
Os02g0743800 Oryza sativa ssp. japonica
Os06g0231300 Oryza sativa ssp. japonica
Peaxi162Scf00047g00017 Petunia axillaris
Peaxi162Scf00047g00134 Petunia axillaris
Peaxi162Scf00068g00244 Petunia axillaris
Peaxi162Scf00377g00093 Petunia axillaris
Peaxi162Scf00548g00005 Petunia axillaris
Peaxi162Scf00550g00549 Petunia axillaris
Peaxi162Scf00618g00415 Petunia axillaris
PGR042G3455 Punica granatum
PGSC0003DMG400009123 Solanum tuberosum
PGSC0003DMG400019603 Solanum tuberosum
PGSC0003DMG400026423 Solanum tuberosum
PGSC0003DMG400046575 Solanum tuberosum
Phvul.001G062800 Phaseolus vulgaris
Phvul.009G053200 Phaseolus vulgaris
Potri.001G132500 Populus trichocarpa
Potri.003G100900 Populus trichocarpa
Potri.012G014100 Populus trichocarpa
Potri.015G013900 Populus trichocarpa
Pp3c11_14270 Physcomitrium patens
Pp3c1_7900 Physcomitrium patens
Pp3c24_16270 Physcomitrium patens
Pp3c2_28400 Physcomitrium patens
Pp3c4_23090 Physcomitrium patens
PRCOL_00000200 Prasinoderma coloniale
PRCOL_00004762 Prasinoderma coloniale
Prupe.2G310800 Prunus persica
Prupe.7G105200 Prunus persica
Psat6g004520 Pisum sativum
PSO063G0851 Papaver somniferum
PSO063G4578 Papaver somniferum
PSO063G5049 Papaver somniferum
PSO170G6345 Papaver somniferum
PSO832G0550 Papaver somniferum
PSO832G1453 Papaver somniferum
QL02p058893 Quercus lobata
QL02p059537 Quercus lobata
QL02p059544 Quercus lobata
QL02p059556 Quercus lobata
QL03p020230 Quercus lobata
QL04p073707 Quercus lobata
QL09p009417 Quercus lobata
QL11p056147 Quercus lobata
RcHm_v2.0_Chr1g0380871 Rosa chinensis
RcHm_v2.0_Chr2g0117791 Rosa chinensis
RcHm_v2.0_Chr3g0471811 Rosa chinensis
Rhsim03G0208100 Rhododendron simsii
Rhsim12G0007900 Rhododendron simsii
Sabra03G0068800 Salix brachista
Sabra12G0017700 Salix brachista
SalBow2G3115 Salvia bowleyana
SalBow4G2656 Salvia bowleyana
SalBow7G0807 Salvia bowleyana
Sc13g0009800 Simmondsia chinensis
Sed0016264 Sechium edule
Sed0026048 Sechium edule
SEGI_06141 Sequoiadendron giganteum
SEGI_21263 Sequoiadendron giganteum
SEGI_33295 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16796 Striga asiatica
SMO347G0058 Selaginella moellendorffii
Solyc02g062410.2 Solanum lycopersicum
Solyc03g083390.4 Solanum lycopersicum
Solyc05g051190.1 Solanum lycopersicum
Solyc06g051950.4 Solanum lycopersicum
Solyc09g092200.3 Solanum lycopersicum
Sopen02g013410 Solanum pennellii
Sopen03g023160 Solanum pennellii
Sopen06g017990 Solanum pennellii
Sopen09g035110 Solanum pennellii
Sopen09g035120 Solanum pennellii
Sp2g03220 Schrenkiella parvula
Sp6g15540 Schrenkiella parvula
Sp7g25860 Schrenkiella parvula
TAR375G0604 Trochodendron aralioides
TAR375G0827 Trochodendron aralioides
TAR629G1311 Trochodendron aralioides
TAR636G3064 Trochodendron aralioides
THA.LOC104799978 Tarenaya hassleriana
THA.LOC104813276 Tarenaya hassleriana
Thecc.03G197600 Theobroma cacao
Thecc.05G017600 Theobroma cacao
Thhalv10014254m.g Eutrema salsugineum
Thhalv10025870m.g Eutrema salsugineum
TPR.G12008 Trifolium pratense
TPR.G12100 Trifolium pratense
TPR.G20416 Trifolium pratense
TPR.G27551 Trifolium pratense
TWI14G0026 Tripterygium wilfordii
TWI39G0853 Tripterygium wilfordii
TWI79G1324 Tripterygium wilfordii
unitig_37.g11983 Utricularia gibba
unitig_92.g28254 Utricularia gibba
vmacro00996 Vaccinium macrocarpon
vmacro06537 Vaccinium macrocarpon
VMungo0647G2402 Vigna mungo
VMungo1309G1312 Vigna mungo
Zm00001eb279760 Zea mays
Zm00001eb372220 Zea mays

User provided reference genes

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