Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13980 Brassica napus
A01p13990 Brassica napus
A01p14000 Brassica napus
A01p14010 Brassica napus
A03p53720 Brassica napus
A05p05400 Brassica napus
A08p15950 Brassica napus
Aa31LG1G26880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3382 Anthoceros agrestis
Actinidia02089 Actinidia chinensis
Actinidia05172 Actinidia chinensis
Actinidia12255 Actinidia chinensis
Actinidia14466 Actinidia chinensis
Actinidia31404 Actinidia chinensis
Ah.12g058200 Amaranthus hybridus
Ah.16g109470 Amaranthus hybridus
AL4G44510 Arabidopsis lyrata
AL7G30850 Arabidopsis lyrata
Aqoxy5G01065 Aquilegia oxysepala
Aqoxy7G00642 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2B8SX0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6H2079 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CAT1L8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D5HFJ9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FH7HBW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7GU57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RFG747 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z5Y4KS Arachis hypogaea
AT2G45380 Arabidopsis thaliana
AT4G22740 Arabidopsis thaliana
ATR0810G143 Amborella trichopoda
Atru.chr4.1107 Acer truncatum
Atru.chr4.1108 Acer truncatum
Atru.chr4.1110 Acer truncatum
Atru.chr4.1111 Acer truncatum
Atru.chr9.1435 Acer truncatum
AUR62004209 Chenopodium quinoa
AUR62010514 Chenopodium quinoa
AUR62013639 Chenopodium quinoa
AUR62017388 Chenopodium quinoa
BcaB02g08974 Brassica carinata
BcaB02g08979 Brassica carinata
BcaC01g00796 Brassica carinata
BcaC02g12215 Brassica carinata
BcaC09g51088 Brassica carinata
BcaC09g51090 Brassica carinata
BcaC09g51091 Brassica carinata
BcaNung01039 Brassica carinata
BcaNung01040 Brassica carinata
BcaNung01677 Brassica carinata
BcaNung02481 Brassica carinata
BcaNung07377 Brassica carinata
BolC1t01644H Brassica oleracea
BolC1t01645H Brassica oleracea
BolC1t01647H Brassica oleracea
BolC1t01649H Brassica oleracea
BolC1t01650H Brassica oleracea
BolC3t20726H Brassica oleracea
BolC4t22256H Brassica oleracea
BolC7t45702H Brassica oleracea
BraA01t01344Z Brassica rapa
BraA03t14434Z Brassica rapa
BraA05t19510Z Brassica rapa
BraA08t33568Z Brassica rapa
C01p17050 Brassica napus
C01p17070 Brassica napus
C01p17080 Brassica napus
C01p17100 Brassica napus
C01p17120 Brassica napus
C01p17140 Brassica napus
C03p84380 Brassica napus
C04p06340 Brassica napus
C07p52100 Brassica napus
CAN.G388.21 Capsicum annuum
CAN.G630.79 Capsicum annuum
CANSAT21G2004 Cannabis sativa
CANSAT56G1374 Cannabis sativa
CARHR140580 Cardamine hirsuta
CARHR229660 Cardamine hirsuta
Carub.0004s2800 Capsella rubella
Carub.0007s1857 Capsella rubella
Ca_12281_v3 Cicer arietinum L.
Ca_19919_v3 Cicer arietinum L.
CBR_g33932 Chara braunii
Cc02_g23930 Coffea canephora
Cc02_g23940 Coffea canephora
Cc08_g13260 Coffea canephora
CDE04G0546 Ceratophyllum demersum
CDE12G0525 Ceratophyllum demersum
Cfa001735 Carpinus fangiana
Cfa001738 Carpinus fangiana
Cfa012018 Carpinus fangiana
Ciclev10020784m.g Citrus clementina
Ciclev10024304m.g Citrus clementina
CiPaw.01G262600 Carya illinoinensis
CiPaw.12G104600 Carya illinoinensis
ClCG00G004650 Citrullus lanatus
ClCG06G000410 Citrullus lanatus
ClCG10G003180 Citrullus lanatus
COL.COLO4_23876 Corchorus olitorius
Cpa.g.c37706 Carica papaya
Cpa.g.c44150 Carica papaya
Cpa.g.sc29.88 Carica papaya
Cre10.g419000 Chlamydomonas reinhardtii
CsaV3_3G003220 Cucumis sativus L.
CsaV3_6G006210 Cucumis sativus L.
CSS0016239 Camellia sinensis var. sinensis
CSS0026380 Camellia sinensis var. sinensis
CSS0039785 Camellia sinensis var. sinensis
CSS0048208 Camellia sinensis var. sinensis
DCAR_005651 Daucus carota
DCAR_005657 Daucus carota
DCAR_006799 Daucus carota
DCAR_031524 Daucus carota
Dinv37761 Davidia involucrata
Dinv39075 Davidia involucrata
Duzib068G0431 Durio zibethinus
Duzib084G1438 Durio zibethinus
Duzib133G1500 Durio zibethinus
Duzib138G0560 Durio zibethinus
Duzib205G0587 Durio zibethinus
ECA233G5854 Erigeron canadensis
ECA236G0237 Erigeron canadensis
EL10Ac1g00884 Beta vulgaris
EL10Ac5g12618 Beta vulgaris
Eucgr.E00477 Eucalyptus grandis
Eucgr.E01440 Eucalyptus grandis
FAN01G0762 Fragaria x ananassa
FAN03G3171 Fragaria x ananassa
FAN06G3140 Fragaria x ananassa
FAN06G5019 Fragaria x ananassa
FAN10G1247 Fragaria x ananassa
FAN10G3219 Fragaria x ananassa
FAN18G1109 Fragaria x ananassa
FvH4_5g00720 Fragaria vesca
FvH4_7g11720 Fragaria vesca
Glyma.01G141900 Glycine max
Glyma.03G025600 Glycine max
Glyma.05G053000 Glycine max
Glyma.17G135300 Glycine max
Gohir.A03G011700 Gossypium hirsutum
Gohir.A11G020600 Gossypium hirsutum
Gohir.A11G080500 Gossypium hirsutum
Gohir.D03G158200 Gossypium hirsutum
Gohir.D11G020300 Gossypium hirsutum
Gohir.D11G085101 Gossypium hirsutum
Gorai.003G166700 Gossypium raimondii
Gorai.007G021600 Gossypium raimondii
Gorai.007G090800 Gossypium raimondii
GSVIVG01004908001 Vitis vinifera
HanXRQChr04g0122531 Helianthus annuus
HanXRQChr07g0188661 Helianthus annuus
HanXRQChr15g0473501 Helianthus annuus
HanXRQChr16g0532551 Helianthus annuus
HanXRQChr17g0549101 Helianthus annuus
Haze_09051 Corylus avellana
Haze_09056 Corylus avellana
Haze_16801 Corylus avellana
Haze_16802 Corylus avellana
Haze_24865 Corylus avellana
Hma1.2p1_0301F.1_g118650 Hydrangea macrophylla
HPP92_000515 Vanilla planifolia
HPP92_014948 Vanilla planifolia
HPP92_014981 Vanilla planifolia
Hund27362 Selenicereus undatus
Hund28688 Selenicereus undatus
Hund28690 Selenicereus undatus
Lalb_Chr05g0225381 Lupinus albus
Lalb_Chr07g0189851 Lupinus albus
Lalb_Chr16g0389621 Lupinus albus
Lj2A208G49 Lonicera japonica
Lj3g0006036 Lotus japonicus
Lj4g0010570 Lotus japonicus
Lj7A529T42 Lonicera japonica
Lj8A255G51 Lonicera japonica
Lj8A255G52 Lonicera japonica
Lj9C568G13 Lonicera japonica
Lsat_1_v5_gn_3_3840 Lactuca sativa
Lsat_1_v5_gn_6_9780 Lactuca sativa
Lsat_1_v5_gn_7_6981 Lactuca sativa
Lsat_1_v5_gn_7_7001 Lactuca sativa
Manes.01G073400 Manihot esculenta
Manes.05G046200 Manihot esculenta
Mapoly0040s0020 Marchantia polymorpha
Mapoly0180s0010 Marchantia polymorpha
MBI12_g34010_MAGBIO Magnolia biondii
MD02G1205300 Malus domestica
MD04G1079300 Malus domestica
MD07G1121800 Malus domestica
Medtr4g024000 Medicago truncatula
Medtr4g102250 Medicago truncatula
MELO3C013988.2 Cucumis melo
MELO3C022499.2 Cucumis melo
Migut.A00836 Erythranthe guttata
Migut.B01626 Erythranthe guttata
MSTRG.12058 Avicennia marina
MSTRG.17180 Avicennia marina
MSTRG.25548 Avicennia marina
MSTRG.4896 Avicennia marina
Nitab4.5_0000457g0220 Nicotiana tabacum
Nitab4.5_0001281g0020 Nicotiana tabacum
Nitab4.5_0003534g0080 Nicotiana tabacum
Nitab4.5_0007059g0020 Nicotiana tabacum
Nitab4.5_0007860g0010 Nicotiana tabacum
Nitab4.5_0009420g0030 Nicotiana tabacum
Nitab4.5_0010237g0030 Nicotiana tabacum
Nn1g01253 Nelumbo nucifera
Nn3g17304 Nelumbo nucifera
Nn4g26379 Nelumbo nucifera
Oeu022407.1 Olea europaea
Oeu022408.1 Olea europaea
Oeu040235.1 Olea europaea
Oeu055492.1 Olea europaea
Oeu055493.1 Olea europaea
Os06g0134900 Oryza sativa ssp. japonica
Os08g0117900 Oryza sativa ssp. japonica
Peaxi162Scf00013g03437 Petunia axillaris
Peaxi162Scf00238g00119 Petunia axillaris
Peaxi162Scf00271g00122 Petunia axillaris
PGR031G1082 Punica granatum
PGR031G3649 Punica granatum
PGR042G2490 Punica granatum
PGSC0003DMG400003933 Solanum tuberosum
PGSC0003DMG400025957 Solanum tuberosum
PGSC0003DMG401025958 Solanum tuberosum
Phvul.003G215200 Phaseolus vulgaris
Phvul.010G083700 Phaseolus vulgaris
Potri.001G117400 Populus trichocarpa
Potri.002G147150 Populus trichocarpa
Potri.003G115400 Populus trichocarpa
Potri.014G069100 Populus trichocarpa
Pp3c13_1670 Physcomitrium patens
Pp3c3_1164 Physcomitrium patens
Prupe.2G144400 Prunus persica
Prupe.5G079800 Prunus persica
Psat4g068560 Pisum sativum
Psat7g231920 Pisum sativum
PSO478G2724 Papaver somniferum
PSO782G4814 Papaver somniferum
QL08p052614 Quercus lobata
QL08p053405 Quercus lobata
RcHm_v2.0_Chr1g0350241 Rosa chinensis
RcHm_v2.0_Chr7g0201491 Rosa chinensis
Rhsim07G0028000 Rhododendron simsii
Rhsim07G0101300 Rhododendron simsii
Sabra14G0048800 Salix brachista
SalBow5G0302 Salvia bowleyana
SalBow5G4326 Salvia bowleyana
SalBow5G4610 Salvia bowleyana
SalBow6G6842 Salvia bowleyana
SalBow7G2025 Salvia bowleyana
Sc01g0009210 Simmondsia chinensis
Sc02g0002620 Simmondsia chinensis
Sed0001700 Sechium edule
Sed0006073 Sechium edule
SEGI_26534 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05575 Striga asiatica
SGA_v2.0_scaffold120G32813 Striga asiatica
SGA_v2.0_scaffold146G36184 Striga asiatica
SGA_v2.0_scaffold153G37002 Striga asiatica
Solyc01g091260.3 Solanum lycopersicum
Solyc01g091270.3 Solanum lycopersicum
Solyc08g079500.3 Solanum lycopersicum
Sopen01g037010 Solanum pennellii
Sopen01g037020 Solanum pennellii
Sopen08g027870 Solanum pennellii
Sp4g27410 Schrenkiella parvula
Sp7g20770 Schrenkiella parvula
TAR362G0320 Trochodendron aralioides
TAR629G2104 Trochodendron aralioides
TAR629G3130 Trochodendron aralioides
TAR636G2587 Trochodendron aralioides
THA.LOC104813900 Tarenaya hassleriana
Thecc.01G377500 Theobroma cacao
Thecc.03G262100 Theobroma cacao
Thhalv10001578m.g Eutrema salsugineum
Thhalv10025744m.g Eutrema salsugineum
TPR.G37659 Trifolium pratense
TPR.G7019 Trifolium pratense
TPR.G9855 Trifolium pratense
TWI23G0991 Tripterygium wilfordii
TWI60G0875 Tripterygium wilfordii
TWI81G0464 Tripterygium wilfordii
unitig_21.g20366 Utricularia gibba
unitig_22.g6800 Utricularia gibba
unitig_749.g14373 Utricularia gibba
unitig_749.g14374 Utricularia gibba
unitig_76.g29087 Utricularia gibba
unitig_8.g3902 Utricularia gibba
vmacro13405 Vaccinium macrocarpon
vmacro13406 Vaccinium macrocarpon
vmacro14040 Vaccinium macrocarpon
VMungo1215G3180 Vigna mungo
VMungo1277G0001 Vigna mungo
Zm00001eb115620 Zea mays
Zm00001eb173660 Zea mays
Zm00001eb260990 Zea mays
Zm00001eb377910 Zea mays

User provided reference genes

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