Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p12260 Brassica napus
A09p53990 Brassica napus
Aa31LG10G15930 Aethionema arabicum
Aa31LG2G1750 Aethionema arabicum
Actinidia08005 Actinidia chinensis
Actinidia22177 Actinidia chinensis
Actinidia22215 Actinidia chinensis
Ah.05g178990 Amaranthus hybridus
Ah.12g052770 Amaranthus hybridus
Ah.12g053310 Amaranthus hybridus
AL2G10060 Arabidopsis lyrata
AL5G44520 Arabidopsis lyrata
Aqoxy7G00071 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I8323W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KLK57A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WLQ804 Arachis hypogaea
AT1G64700 Arabidopsis thaliana
AT3G61920 Arabidopsis thaliana
ATR0078G028 Amborella trichopoda
ATR0602G057 Amborella trichopoda
Atru.chr5.759 Acer truncatum
Atru.chr9.1857 Acer truncatum
Atru.chr9.1928 Acer truncatum
Atru.chr9.1989 Acer truncatum
AUR62007073 Chenopodium quinoa
AUR62010866 Chenopodium quinoa
AUR62019868 Chenopodium quinoa
AUR62019937 Chenopodium quinoa
AUR62022502 Chenopodium quinoa
AUR62022671 Chenopodium quinoa
BcaB07g31618 Brassica carinata
BcaC04g22865 Brassica carinata
BcaC07g40685 Brassica carinata
BcaC07g42619 Brassica carinata
BolC8t51264H Brassica oleracea
BolC9t54351H Brassica oleracea
BraA09t36869Z Brassica rapa
BraA09t40813Z Brassica rapa
C08p36850 Brassica napus
C09p14490 Brassica napus
CANSAT01G1483 Cannabis sativa
CANSAT21G0268 Cannabis sativa
CANSAT21G1974 Cannabis sativa
CANSAT21G2105 Cannabis sativa
CANSAT56G1904 Cannabis sativa
CANSAT56G3209 Cannabis sativa
CARHR046200 Cardamine hirsuta
CARHR172280 Cardamine hirsuta
Carub.0002s0003 Capsella rubella
Carub.0005s2868 Capsella rubella
Ca_10715_v3 Cicer arietinum L.
Ca_17465_v3 Cicer arietinum L.
Ca_26734_v3 Cicer arietinum L.
Cc00_g16410 Coffea canephora
Cc02_g39930 Coffea canephora
Cc08_g16910 Coffea canephora
CDE04G1535 Ceratophyllum demersum
CDE12G0944 Ceratophyllum demersum
Cfa003741 Carpinus fangiana
Cfa011907 Carpinus fangiana
Cfa011979 Carpinus fangiana
Ciclev10022281m.g Citrus clementina
Ciclev10023315m.g Citrus clementina
Ciclev10024010m.g Citrus clementina
CiPaw.01G082000 Carya illinoinensis
CiPaw.11G110900 Carya illinoinensis
CiPaw.11G118700 Carya illinoinensis
CiPaw.12G076300 Carya illinoinensis
CiPaw.12G081200 Carya illinoinensis
ClCG07G008260 Citrullus lanatus
ClCG07G011470 Citrullus lanatus
COL.COLO4_06208 Corchorus olitorius
COL.COLO4_10731 Corchorus olitorius
COL.COLO4_10817 Corchorus olitorius
Cpa.g.sc141.2 Carica papaya
Cpa.g.sc37.90 Carica papaya
Cpa.g.sc634.4 Carica papaya
CsaV3_3G007320 Cucumis sativus L.
CsaV3_4G005840 Cucumis sativus L.
CsaV3_4G006750 Cucumis sativus L.
CSS0015495 Camellia sinensis var. sinensis
CSS0018027 Camellia sinensis var. sinensis
CSS0032293 Camellia sinensis var. sinensis
CSS0048832 Camellia sinensis var. sinensis
DCAR_006522 Daucus carota
DCAR_006563 Daucus carota
Dinv37512 Davidia involucrata
Duzib133G0281 Durio zibethinus
Duzib138G1476 Durio zibethinus
Duzib205G0269 Durio zibethinus
Duzib205G1099 Durio zibethinus
ECA246G0612 Erigeron canadensis
ECA246G2759 Erigeron canadensis
EL10Ac1g00192 Beta vulgaris
EL10Ac5g12942 Beta vulgaris
Eucgr.E00016 Eucalyptus grandis
Eucgr.E00885 Eucalyptus grandis
Eucgr.E01054 Eucalyptus grandis
Eucgr.E01061 Eucalyptus grandis
FAN01G2830 Fragaria x ananassa
FAN03G3289 Fragaria x ananassa
FAN04G0254 Fragaria x ananassa
FAN04G2345 Fragaria x ananassa
FAN06G3840 Fragaria x ananassa
FAN06G4558 Fragaria x ananassa
FAN08G1358 Fragaria x ananassa
FAN08G3252 Fragaria x ananassa
FAN10G0899 Fragaria x ananassa
FAN10G4169 Fragaria x ananassa
FAN13G0081 Fragaria x ananassa
FAN13G3015 Fragaria x ananassa
FAN18G0019 Fragaria x ananassa
FAN18G0336 Fragaria x ananassa
FAN18G0680 Fragaria x ananassa
FvH4_5g04950 Fragaria vesca
FvH4_5g10680 Fragaria vesca
FvH4_7g17560 Fragaria vesca
Glyma.03G260700 Glycine max
Glyma.05G218300 Glycine max
Glyma.07G050100 Glycine max
Glyma.08G024400 Glycine max
Glyma.09G129800 Glycine max
Glyma.10G230400 Glycine max
Glyma.16G018800 Glycine max
Glyma.16G177600 Glycine max
Glyma.19G259600 Glycine max
Glyma.20G163000 Glycine max
Gohir.A02G099300 Gossypium hirsutum
Gohir.A08G034900 Gossypium hirsutum
Gohir.A08G109600 Gossypium hirsutum
Gohir.A09G188100 Gossypium hirsutum
Gohir.A09G189700 Gossypium hirsutum
Gohir.A11G100600 Gossypium hirsutum
Gohir.D03G084400 Gossypium hirsutum
Gohir.D08G045400 Gossypium hirsutum
Gohir.D08G122400 Gossypium hirsutum
Gohir.D09G182900 Gossypium hirsutum
Gohir.D09G184400 Gossypium hirsutum
Gohir.D11G105300 Gossypium hirsutum
Gorai.003G078200 Gossypium raimondii
Gorai.004G044300 Gossypium raimondii
Gorai.004G129100 Gossypium raimondii
Gorai.006G205200 Gossypium raimondii
Gorai.006G206900 Gossypium raimondii
Gorai.007G112600 Gossypium raimondii
GSVIVG01019671001 Vitis vinifera
GSVIVG01027432001 Vitis vinifera
HanXRQChr17g0534111 Helianthus annuus
HanXRQChr17g0534981 Helianthus annuus
Haze_09094 Corylus avellana
Haze_09192 Corylus avellana
Haze_15727 Corylus avellana
Hma1.2p1_0359F.1_g135100 Hydrangea macrophylla
Hma1.2p1_0456F.1_g156800 Hydrangea macrophylla
Hma1.2p1_1697F.1_g298070 Hydrangea macrophylla
Hma1.2p1_2008F.1_g310960 Hydrangea macrophylla
HPP92_021080 Vanilla planifolia
Lalb_Chr05g0224011 Lupinus albus
Lalb_Chr10g0100851 Lupinus albus
Lalb_Chr19g0130591 Lupinus albus
Lalb_Chr21g0305271 Lupinus albus
Lj1g0027887 Lotus japonicus
Lj2g0024076 Lotus japonicus
Lj2P163T54 Lonicera japonica
Lj3g0024476 Lotus japonicus
Lj4g0026828 Lotus japonicus
Lj5g0015365 Lotus japonicus
Lj8P199T12 Lonicera japonica
Lsat_1_v5_gn_0_45861 Lactuca sativa
Lsat_1_v5_gn_3_11301 Lactuca sativa
Lsat_1_v5_gn_3_14761 Lactuca sativa
Manes.01G240600 Manihot esculenta
Manes.02G008000 Manihot esculenta
Manes.05G017000 Manihot esculenta
Manes.12G116600 Manihot esculenta
MBI04_g15572_MAGBIO Magnolia biondii
MBI06_g13416_MAGBIO Magnolia biondii
MBI12_g16192_MAGBIO Magnolia biondii
MD01G1088400 Malus domestica
MD06G1110100 Malus domestica
MD06G1121500 Malus domestica
MD07G1158800 Malus domestica
MD08G1186200 Malus domestica
MD14G1131100 Malus domestica
MD14G1138100 Malus domestica
Medtr1g099630 Medicago truncatula
Medtr6g052290 Medicago truncatula
Medtr8g017100 Medicago truncatula
Medtr8g099655 Medicago truncatula
MELO3C005951.2 Cucumis melo
MELO3C016274.2 Cucumis melo
MELO3C016367.2 Cucumis melo
Migut.E01280 Erythranthe guttata
Migut.N02126 Erythranthe guttata
Nitab4.5_0000479g0060 Nicotiana tabacum
Nitab4.5_0002053g0080 Nicotiana tabacum
Nitab4.5_0002231g0100 Nicotiana tabacum
Nitab4.5_0003419g0080 Nicotiana tabacum
Nitab4.5_0004249g0030 Nicotiana tabacum
Nitab4.5_0007367g0010 Nicotiana tabacum
Nn1g00261 Nelumbo nucifera
Nn1g00427 Nelumbo nucifera
Nn3g18858 Nelumbo nucifera
Nn3g18976 Nelumbo nucifera
Oeu010729.1 Olea europaea
Oeu022736.1 Olea europaea
Oeu064420.1 Olea europaea
Peaxi162Scf00074g10019 Petunia axillaris
Peaxi162Scf00102g01853 Petunia axillaris
Peaxi162Scf00313g00031 Petunia axillaris
PGR042G2287 Punica granatum
PGR042G3556 Punica granatum
PGSC0003DMG400005843 Solanum tuberosum
PGSC0003DMG400011267 Solanum tuberosum
PGSC0003DMG400012229 Solanum tuberosum
Phvul.002G300100 Phaseolus vulgaris
Phvul.004G106400 Phaseolus vulgaris
Phvul.007G075200 Phaseolus vulgaris
Phvul.009G257700 Phaseolus vulgaris
Phvul.010G119100 Phaseolus vulgaris
Potri.001G089000 Populus trichocarpa
Potri.001G448500 Populus trichocarpa
Potri.002G178900 Populus trichocarpa
Potri.011G153000 Populus trichocarpa
Potri.014G104900 Populus trichocarpa
Prupe.2G196900 Prunus persica
Prupe.5G123000 Prunus persica
Prupe.5G132000 Prunus persica
Psat3g171000 Pisum sativum
Psat4g163560 Pisum sativum
Psat6g195880 Pisum sativum
Psat7g024880 Pisum sativum
PSO063G2959 Papaver somniferum
PSO170G1572 Papaver somniferum
PSO384G0536 Papaver somniferum
QL02p027560 Quercus lobata
QL02p029860 Quercus lobata
QL02p029867 Quercus lobata
QL02p029876 Quercus lobata
QL02p029889 Quercus lobata
QL02p029894 Quercus lobata
QL08p047076 Quercus lobata
RcHm_v2.0_Chr1g0361011 Rosa chinensis
RcHm_v2.0_Chr7g0187471 Rosa chinensis
RcHm_v2.0_Chr7g0194121 Rosa chinensis
Rhsim02G0246900 Rhododendron simsii
Rhsim02G0253400 Rhododendron simsii
Rhsim03G0043600 Rhododendron simsii
Sabra01G0065200 Salix brachista
Sabra02G0134900 Salix brachista
Sabra11G0146400 Salix brachista
Sabra14G0077300 Salix brachista
SalBow5G5501 Salvia bowleyana
SalBow8G1331 Salvia bowleyana
Sc01g0010380 Simmondsia chinensis
Sc01g0010790 Simmondsia chinensis
Sc23g0001820 Simmondsia chinensis
Sed0000936 Sechium edule
Sed0012868 Sechium edule
Sed0017440 Sechium edule
SEGI_10050 Sequoiadendron giganteum
SEGI_25160 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30247 Striga asiatica
SGA_v2.0_scaffold111G31397 Striga asiatica
SGA_v2.0_scaffold232G43529 Striga asiatica
Solyc08g008360.2 Solanum lycopersicum
Solyc10g005020.3 Solanum lycopersicum
Sopen08g004240 Solanum pennellii
Sopen10g001030 Solanum pennellii
Sp2g00030 Schrenkiella parvula
Sp5g01430 Schrenkiella parvula
TAR374G1498 Trochodendron aralioides
TAR375G0553 Trochodendron aralioides
THA.LOC104802095 Tarenaya hassleriana
THA.LOC104809298 Tarenaya hassleriana
Thecc.01G334100 Theobroma cacao
Thecc.03G218700 Theobroma cacao
Thecc.03G301000 Theobroma cacao
Thhalv10006365m.g Eutrema salsugineum
Thhalv10010753m.g Eutrema salsugineum
Thhalv10023888m.g Eutrema salsugineum
TPR.G19840 Trifolium pratense
TPR.G3449 Trifolium pratense
TPR.G7720 Trifolium pratense
TPR.G7743 Trifolium pratense
TPR.G9174 Trifolium pratense
TWI14G0548 Tripterygium wilfordii
TWI15G0718 Tripterygium wilfordii
TWI60G0014 Tripterygium wilfordii
unitig_0.g2744 Utricularia gibba
unitig_0.g2745 Utricularia gibba
unitig_21.g20035 Utricularia gibba
unitig_26.g9479 Utricularia gibba
unitig_748.g7136 Utricularia gibba
VMungo0251G1524 Vigna mungo
VMungo0331G1755 Vigna mungo
VMungo0464G0722 Vigna mungo
VMungo0720G2656 Vigna mungo
VMungo1309G2654 Vigna mungo

User provided reference genes

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