Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09240 Brassica napus
A03p07780 Brassica napus
A03p13610 Brassica napus
A03p33100 Brassica napus
A07p37460 Brassica napus
A10p13530 Brassica napus
Aa31LG3G12150 Aethionema arabicum
Aa31LG3G12160 Aethionema arabicum
Aa31LG3G12170 Aethionema arabicum
Aa31LG3G2950 Aethionema arabicum
Aa31LG5G13240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1132 Anthoceros agrestis
Actinidia03294 Actinidia chinensis
Actinidia27041 Actinidia chinensis
Actinidia37102 Actinidia chinensis
Ah.02g126750 Amaranthus hybridus
Ah.04g158980 Amaranthus hybridus
Ah.06g195460 Amaranthus hybridus
Ah.10g025160 Amaranthus hybridus
AL3G12180 Arabidopsis lyrata
AL6G27380 Arabidopsis lyrata
AL8G31890 Arabidopsis lyrata
Aqoxy4G03060 Aquilegia oxysepala
Aqoxy6G00004 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L89NVV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LHNV5V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XN0DZ5 Arachis hypogaea
AT3G02770 Arabidopsis thaliana
AT5G16450 Arabidopsis thaliana
AT5G56260 Arabidopsis thaliana
ATR0751G020 Amborella trichopoda
ATR1145G081 Amborella trichopoda
Atru.chr12.1781 Acer truncatum
Atru.chr2.3908 Acer truncatum
AUR62000307 Chenopodium quinoa
AUR62006652 Chenopodium quinoa
AUR62007884 Chenopodium quinoa
AUR62021371 Chenopodium quinoa
AUR62033289 Chenopodium quinoa
BcaB01g04388 Brassica carinata
BcaB01g04982 Brassica carinata
BcaB04g19389 Brassica carinata
BcaB04g21399 Brassica carinata
BcaB05g22256 Brassica carinata
BcaC01g06412 Brassica carinata
BcaC03g14233 Brassica carinata
BcaC04g20114 Brassica carinata
BcaC05g30509 Brassica carinata
BcaNung04308 Brassica carinata
BNapus_Darmor_BZH_scaffold_122p00250 Brassica napus
BNapus_Darmor_BZH_scaffold_99p00280 Brassica napus
BolC1t05872H Brassica oleracea
BolC2t07654H Brassica oleracea
BolC3t13396H Brassica oleracea
BolC3t14024H Brassica oleracea
BolC3t16293H Brassica oleracea
BraA01t04616Z Brassica rapa
BraA02t05989Z Brassica rapa
BraA03t10105Z Brassica rapa
BraA03t10665Z Brassica rapa
BraA03t12480Z Brassica rapa
BraA07t31303Z Brassica rapa
BraA10t43455Z Brassica rapa
C02p15390 Brassica napus
C03p09000 Brassica napus
C03p15960 Brassica napus
C03p40280 Brassica napus
C09p47510 Brassica napus
CAN.G492.62 Capsicum annuum
CAN.G492.63 Capsicum annuum
CAN.G772.8 Capsicum annuum
CAN.G966.2 Capsicum annuum
CANSAT11G0454 Cannabis sativa
CANSAT54G0810 Cannabis sativa
CARHR076780 Cardamine hirsuta
CARHR196810 Cardamine hirsuta
CARHR269660 Cardamine hirsuta
Carub.0003s0187 Capsella rubella
Carub.0006s1464 Capsella rubella
Carub.0008s1658 Capsella rubella
Ca_00208_v3 Cicer arietinum L.
Ca_07989_v3 Cicer arietinum L.
CBR_g4825 Chara braunii
Cc04_g03330 Coffea canephora
Cc05_g15810 Coffea canephora
CDE05G3509 Ceratophyllum demersum
CDE06G2843 Ceratophyllum demersum
CDE07G0733 Ceratophyllum demersum
CDE11G0525 Ceratophyllum demersum
Ciclev10009699m.g Citrus clementina
Ciclev10012944m.g Citrus clementina
CiPaw.07G080700 Carya illinoinensis
CiPaw.08G114900 Carya illinoinensis
CiPaw.09G193700 Carya illinoinensis
CiPaw.09G193800 Carya illinoinensis
CiPaw.09G193900 Carya illinoinensis
ClCG00G006480 Citrullus lanatus
ClCG03G010660 Citrullus lanatus
ClCG10G003870 Citrullus lanatus
ClCG10G004010 Citrullus lanatus
COL.COLO4_13920 Corchorus olitorius
COL.COLO4_22904 Corchorus olitorius
COL.COLO4_38015 Corchorus olitorius
Cpa.g.sc12.54 Carica papaya
Cre13.g578150 Chlamydomonas reinhardtii
CsaV3_1G044510 Cucumis sativus L.
CsaV3_3G003850 Cucumis sativus L.
CSS0005501 Camellia sinensis var. sinensis
CSS0005576 Camellia sinensis var. sinensis
CSS0019865 Camellia sinensis var. sinensis
CSS0028042 Camellia sinensis var. sinensis
CSS0049292 Camellia sinensis var. sinensis
DCAR_009628 Daucus carota
DCAR_014444 Daucus carota
DCAR_019937 Daucus carota
DCAR_019939 Daucus carota
Dinv42529 Davidia involucrata
Duzib106G0111 Durio zibethinus
Duzib128G0836 Durio zibethinus
Duzib170G0022 Durio zibethinus
Duzib212G0331 Durio zibethinus
ECA236G4629 Erigeron canadensis
ECA240G0073 Erigeron canadensis
EL10Ac3g06844 Beta vulgaris
EL10Ac4g09962 Beta vulgaris
EL10Ac6g14693 Beta vulgaris
Eucgr.A01650 Eucalyptus grandis
Eucgr.A01781 Eucalyptus grandis
Eucgr.F03641 Eucalyptus grandis
FAN11G3714 Fragaria x ananassa
FAN14G3588 Fragaria x ananassa
FAN16G3695 Fragaria x ananassa
FAN21G0744 Fragaria x ananassa
FAN25G2795 Fragaria x ananassa
FvH4_3g40272 Fragaria vesca
FvH4_3g41390 Fragaria vesca
FvH4_6g00480 Fragaria vesca
Glyma.09G250300 Glycine max
Glyma.13G250900 Glycine max
Glyma.15G063400 Glycine max
Glyma.18G242200 Glycine max
Gohir.A05G392500 Gossypium hirsutum
Gohir.A08G026300 Gossypium hirsutum
Gohir.A09G062000 Gossypium hirsutum
Gohir.D04G024600 Gossypium hirsutum
Gohir.D08G036700 Gossypium hirsutum
Gohir.D09G060900 Gossypium hirsutum
Gorai.004G034700 Gossypium raimondii
Gorai.006G075500 Gossypium raimondii
Gorai.012G027100 Gossypium raimondii
GSVIVG01014857001 Vitis vinifera
GSVIVG01019090001 Vitis vinifera
HanXRQChr03g0070091 Helianthus annuus
HanXRQChr11g0335261 Helianthus annuus
Haze_04559 Corylus avellana
Haze_09924 Corylus avellana
Hma1.2p1_0193F.1_g084420 Hydrangea macrophylla
HPP92_000411 Vanilla planifolia
HPP92_005454 Vanilla planifolia
HPP92_025770 Vanilla planifolia
Hund07349 Selenicereus undatus
Lalb_Chr01g0020411 Lupinus albus
Lalb_Chr03g0038651 Lupinus albus
Lalb_Chr09g0334811 Lupinus albus
Lalb_Chr16g0392211 Lupinus albus
Lj1g0026740 Lotus japonicus
Lj1P902T24 Lonicera japonica
Lj5C92T10 Lonicera japonica
Lj6g0010340 Lotus japonicus
Lj6g0011260 Lotus japonicus
Lj6g0018665 Lotus japonicus
Lj9P482T21 Lonicera japonica
Lsat_1_v5_gn_7_115980 Lactuca sativa
Lsat_1_v5_gn_9_112301 Lactuca sativa
Manes.05G204160 Manihot esculenta
Manes.12G005600 Manihot esculenta
Mapoly0046s0065 Marchantia polymorpha
MBI15_g29770_MAGBIO Magnolia biondii
MBI15_g32222_MAGBIO Magnolia biondii
MCO07G480 Micromonas commoda
MD01G1198600 Malus domestica
MD03G1044600 Malus domestica
MD03G1044900 Malus domestica
MD03G1045200 Malus domestica
MD03G1160400 Malus domestica
MD04G1245000 Malus domestica
MD11G1047500 Malus domestica
MD12G1086900 Malus domestica
Medtr2g010800 Medicago truncatula
Medtr2g010815 Medicago truncatula
Medtr7g080040 Medicago truncatula
MELO3C010055.2 Cucumis melo
MELO3C014067.2 Cucumis melo
Migut.F01120 Erythranthe guttata
Migut.M01573 Erythranthe guttata
Migut.M01575 Erythranthe guttata
MSTRG.16124 Avicennia marina
MSTRG.16126 Avicennia marina
MSTRG.8456 Avicennia marina
MSTRG.8736 Avicennia marina
Nitab4.5_0000611g0280 Nicotiana tabacum
Nitab4.5_0000926g0110 Nicotiana tabacum
Nitab4.5_0004488g0060 Nicotiana tabacum
Nitab4.5_0007498g0010 Nicotiana tabacum
Nn1g09822 Nelumbo nucifera
Oeu024225.1 Olea europaea
Oeu041911.1 Olea europaea
Oeu052020.1 Olea europaea
Os01g0722800 Oryza sativa ssp. japonica
Os02g0761900 Oryza sativa ssp. japonica
Os02g0762100 Oryza sativa ssp. japonica
Peaxi162Scf00337g00028 Petunia axillaris
Peaxi162Scf00694g00014 Petunia axillaris
PGR031G3022 Punica granatum
PGR031G3364 Punica granatum
PGSC0003DMG400011236 Solanum tuberosum
PGSC0003DMG400029499 Solanum tuberosum
PGSC0003DMG400040086 Solanum tuberosum
Phvul.006G196200 Phaseolus vulgaris
Phvul.008G054050 Phaseolus vulgaris
Potri.011G169700 Populus trichocarpa
Potri.013G085700 Populus trichocarpa
Potri.019G053800 Populus trichocarpa
Pp3c16_16820 Physcomitrium patens
Pp3c5_7350 Physcomitrium patens
Prupe.6G036500 Prunus persica
Prupe.6G036700 Prunus persica
Prupe.6G361600 Prunus persica
Psat1g211160 Pisum sativum
Psat1g211680 Pisum sativum
Psat3g138160 Pisum sativum
PSO063G7097 Papaver somniferum
PSO541G3891 Papaver somniferum
PSO675G7802 Papaver somniferum
PSO782G2084 Papaver somniferum
QL01p045550 Quercus lobata
QL08p000173 Quercus lobata
RcHm_v2.0_Chr3g0447861 Rosa chinensis
RcHm_v2.0_Chr5g0074321 Rosa chinensis
RcHm_v2.0_Chr5g0074341 Rosa chinensis
RcHm_v2.0_Chr6g0297871 Rosa chinensis
Rhsim04G0006900 Rhododendron simsii
Rhsim11G0032600 Rhododendron simsii
Rhsim11G0032700 Rhododendron simsii
Rhsim11G0032800 Rhododendron simsii
RhsimUnG0059400 Rhododendron simsii
Sabra11G0137300 Salix brachista
Sabra13G0078000 Salix brachista
Sabra19G0063000 Salix brachista
SalBow1G5357 Salvia bowleyana
SalBow1G5546 Salvia bowleyana
SalBow2G1669 Salvia bowleyana
SalBow4G1090 Salvia bowleyana
SalBow8G4562 Salvia bowleyana
Sc04g0006930 Simmondsia chinensis
Sc04g0006960 Simmondsia chinensis
Sc16g0010410 Simmondsia chinensis
Sed0001137 Sechium edule
Sed0016860 Sechium edule
Sed0027210 Sechium edule
SEGI_27833 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40230 Striga asiatica
SMO259G0054 Selaginella moellendorffii
Solyc04g008280.2 Solanum lycopersicum
Solyc10g005670.3 Solanum lycopersicum
Sopen04g003400 Solanum pennellii
Sopen10g001640 Solanum pennellii
Sp2g06630 Schrenkiella parvula
Sp3g01800 Schrenkiella parvula
Sp6g18110 Schrenkiella parvula
Sp6g27740 Schrenkiella parvula
TAR113G0002 Trochodendron aralioides
TAR365G0415 Trochodendron aralioides
TAR626G0977 Trochodendron aralioides
TAR636G1982 Trochodendron aralioides
THA.LOC104802954 Tarenaya hassleriana
THA.LOC104809227 Tarenaya hassleriana
THA.LOC104813469 Tarenaya hassleriana
THA.LOC104817728 Tarenaya hassleriana
Thecc.04G278600 Theobroma cacao
Thecc.05G195600 Theobroma cacao
Thecc.07G000500 Theobroma cacao
Thhalv10014864m.g Eutrema salsugineum
Thhalv10014865m.g Eutrema salsugineum
Thhalv10021668m.g Eutrema salsugineum
TPR.G31805 Trifolium pratense
TPR.G32655 Trifolium pratense
TWI14G0483 Tripterygium wilfordii
TWI18G0022 Tripterygium wilfordii
TWI36G0016 Tripterygium wilfordii
TWI39G0985 Tripterygium wilfordii
TWI75G1705 Tripterygium wilfordii
unitig_0.g2480 Utricularia gibba
unitig_32.g11094 Utricularia gibba
vmacro17422 Vaccinium macrocarpon
VMungo0540G1029 Vigna mungo
VMungo1383G0813 Vigna mungo
Zm00001eb124200 Zea mays
Zm00001eb228860 Zea mays

User provided reference genes

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