Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19770 Brassica napus
A04p05500 Brassica napus
A04p07090 Brassica napus
A04p27310 Brassica napus
A04p27330 Brassica napus
A05p19570 Brassica napus
A08p03080 Brassica napus
A09p34170 Brassica napus
A09p47270 Brassica napus
Aa31LG10G3590 Aethionema arabicum
Aa31sc26G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3934 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4808 Anthoceros agrestis
Actinidia03965 Actinidia chinensis
Actinidia37775 Actinidia chinensis
Ah.02g116090 Amaranthus hybridus
Ah.06g187810 Amaranthus hybridus
Ah.12g059610 Amaranthus hybridus
AL1G59280 Arabidopsis lyrata
AL1G59310 Arabidopsis lyrata
AL4G31950 Arabidopsis lyrata
AL5G32980 Arabidopsis lyrata
AL5G35310 Arabidopsis lyrata
Aqoxy1G00595 Aquilegia oxysepala
Aqoxy1G00598 Aquilegia oxysepala
Aqoxy7G00668 Aquilegia oxysepala
Aqoxy7G00669 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.05JDR6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1FB51V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BDY4CW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BMTG0R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R8PHGQ Arachis hypogaea
AT1G51420 Arabidopsis thaliana
AT2G35840 Arabidopsis thaliana
AT3G52340 Arabidopsis thaliana
AT3G54270 Arabidopsis thaliana
ATR0697G227 Amborella trichopoda
Atru.chr12.1148 Acer truncatum
Atru.chr12.1149 Acer truncatum
Atru.chr12.1151 Acer truncatum
Atru.chr8.1292 Acer truncatum
AUR62014285 Chenopodium quinoa
AUR62034149 Chenopodium quinoa
AUR62036326 Chenopodium quinoa
AUR62038431 Chenopodium quinoa
BcaB01g03876 Brassica carinata
BcaB02g08577 Brassica carinata
BcaB02g11243 Brassica carinata
BcaB03g16366 Brassica carinata
BcaB04g17236 Brassica carinata
BcaB04g17240 Brassica carinata
BcaB06g28880 Brassica carinata
BcaB06g28883 Brassica carinata
BcaC01g01247 Brassica carinata
BcaC01g05701 Brassica carinata
BcaC02g07663 Brassica carinata
BcaC02g09077 Brassica carinata
BcaC02g09266 Brassica carinata
BcaC08g43912 Brassica carinata
BcaC08g43914 Brassica carinata
BcaNung06363 Brassica carinata
BolC3t14706H Brassica oleracea
BolC3t21296H Brassica oleracea
BolC4t25393H Brassica oleracea
BolC4t25649H Brassica oleracea
BolC4t27960H Brassica oleracea
BolC5t31858H Brassica oleracea
BolC5t31859H Brassica oleracea
BolC8t50555H Brassica oleracea
BraA03t11229Z Brassica rapa
BraA04t16250Z Brassica rapa
BraA04t16406Z Brassica rapa
BraA04t18230Z Brassica rapa
BraA05t20861Z Brassica rapa
BraA08t32340Z Brassica rapa
BraA09t40188Z Brassica rapa
C03p23060 Brassica napus
C03p89740 Brassica napus
C04p38180 Brassica napus
C04p40670 Brassica napus
C04p64830 Brassica napus
C05p31350 Brassica napus
C05p31360 Brassica napus
C06p13010 Brassica napus
C06p13070 Brassica napus
C08p29500 Brassica napus
CAN.G388.46 Capsicum annuum
CAN.G674.35 Capsicum annuum
CANSAT56G0284 Cannabis sativa
CANSAT64G0597 Cannabis sativa
CARHR041600 Cardamine hirsuta
CARHR130100 Cardamine hirsuta
CARHR162110 Cardamine hirsuta
CARHR164190 Cardamine hirsuta
Carub.0001s4030 Capsella rubella
Carub.0004s1760 Capsella rubella
Carub.0005s1868 Capsella rubella
Carub.0005s2086 Capsella rubella
Ca_11656_v3 Cicer arietinum L.
Ca_18142_v3 Cicer arietinum L.
CBR_g51920 Chara braunii
Cc06_g06940 Coffea canephora
CDE08G0609 Ceratophyllum demersum
Cfa020072 Carpinus fangiana
Ciclev10011822m.g Citrus clementina
Ciclev10015425m.g Citrus clementina
CiPaw.10G020700 Carya illinoinensis
CiPaw.14G036900 Carya illinoinensis
ClCG05G022070 Citrullus lanatus
ClCG10G018000 Citrullus lanatus
COL.COLO4_29498 Corchorus olitorius
Cpa.g.sc222.17 Carica papaya
Cpa.g.sc36.95 Carica papaya
Cre06.g283400 Chlamydomonas reinhardtii
Cre07.g348200 Chlamydomonas reinhardtii
Cre12.g543477 Chlamydomonas reinhardtii
Cre36.g759647 Chlamydomonas reinhardtii
CsaV3_3G038290 Cucumis sativus L.
CsaV3_5G035080 Cucumis sativus L.
CSS0017072 Camellia sinensis var. sinensis
CSS0028296 Camellia sinensis var. sinensis
CSS0045680 Camellia sinensis var. sinensis
DCAR_006634 Daucus carota
DCAR_013458 Daucus carota
DCAR_016909 Daucus carota
Dinv01521 Davidia involucrata
Dinv02343 Davidia involucrata
Dinv10776 Davidia involucrata
Dinv11895 Davidia involucrata
Dinv25079 Davidia involucrata
Duzib093G0599 Durio zibethinus
Duzib114G0523 Durio zibethinus
Duzib128G1303 Durio zibethinus
ECA238G0488 Erigeron canadensis
ECA248G0810 Erigeron canadensis
EL10Ac4g08748 Beta vulgaris
EL10Ac5g11810 Beta vulgaris
Eucgr.A02547 Eucalyptus grandis
Eucgr.G02659 Eucalyptus grandis
FAN01G2227 Fragaria x ananassa
FAN05G3387 Fragaria x ananassa
FAN05G5608 Fragaria x ananassa
FAN06G1820 Fragaria x ananassa
FAN06G3390 Fragaria x ananassa
FAN09G3318 Fragaria x ananassa
FAN10G4368 Fragaria x ananassa
FAN14G1990 Fragaria x ananassa
FvH4_6g20950 Fragaria vesca
FvH4_7g05160 Fragaria vesca
Glyma.10G086600 Glycine max
Glyma.20G070500 Glycine max
Gohir.A04G055800 Gossypium hirsutum
Gohir.A05G285800 Gossypium hirsutum
Gohir.D04G093100 Gossypium hirsutum
Gohir.D05G286900 Gossypium hirsutum
Gorai.009G301900 Gossypium raimondii
Gorai.009G395300 Gossypium raimondii
GSVIVG01022530001 Vitis vinifera
GSVIVG01029753001 Vitis vinifera
HanXRQChr01g0026151 Helianthus annuus
HanXRQChr14g0453231 Helianthus annuus
Haze_03419 Corylus avellana
Haze_20123 Corylus avellana
Hma1.2p1_0127F.1_g059780 Hydrangea macrophylla
Hma1.2p1_0401F.1_g144750 Hydrangea macrophylla
HPP92_011040 Vanilla planifolia
HPP92_016639 Vanilla planifolia
Hund06819 Selenicereus undatus
Hund15008 Selenicereus undatus
Lalb_Chr01g0010651 Lupinus albus
Lalb_Chr02g0154241 Lupinus albus
Lj1A1059T46 Lonicera japonica
Lj5g0019055 Lotus japonicus
Lj6g0010813 Lotus japonicus
Lj6g0026471 Lotus japonicus
Lj9A663G44 Lonicera japonica
Lsat_1_v5_gn_0_20520 Lactuca sativa
Lsat_1_v5_gn_1_56881 Lactuca sativa
Lsat_1_v5_gn_2_102060 Lactuca sativa
Manes.08G037000 Manihot esculenta
Manes.09G042100 Manihot esculenta
Manes.10G071200 Manihot esculenta
Mapoly0079s0029 Marchantia polymorpha
Mapoly0787s0001 Marchantia polymorpha
MBI05_g03322_MAGBIO Magnolia biondii
MD02G1260600 Malus domestica
MD02G1260700 Malus domestica
MD12G1045400 Malus domestica
MD14G1044300 Malus domestica
Medtr1g040560 Medicago truncatula
Medtr1g054980 Medicago truncatula
MELO3C009570.2 Cucumis melo
MELO3C012320.2 Cucumis melo
Migut.J00731 Erythranthe guttata
MSTRG.19325 Avicennia marina
MSTRG.26590 Avicennia marina
Nitab4.5_0000429g0060 Nicotiana tabacum
Nitab4.5_0000721g0060 Nicotiana tabacum
Nitab4.5_0004995g0050 Nicotiana tabacum
Nitab4.5_0007076g0020 Nicotiana tabacum
Nn1g09622 Nelumbo nucifera
Oeu035661.1 Olea europaea
Oeu058127.3 Olea europaea
Os01g0376700 Oryza sativa ssp. japonica
Os02g0143100 Oryza sativa ssp. japonica
Os05g0144900 Oryza sativa ssp. japonica
Peaxi162Scf00203g00315 Petunia axillaris
PGR142G1526 Punica granatum
PGSC0003DMG400021341 Solanum tuberosum
PGSC0003DMG400028134 Solanum tuberosum
Phvul.007G233700 Phaseolus vulgaris
Phvul.007G265500 Phaseolus vulgaris
Potri.006G199800 Populus trichocarpa
Potri.008G013300 Populus trichocarpa
Potri.016G066100 Populus trichocarpa
Pp3c10_9450 Physcomitrium patens
Pp3c14_5810 Physcomitrium patens
Pp3c19_6350 Physcomitrium patens
Pp3c22_1840 Physcomitrium patens
Pp3c24_1340 Physcomitrium patens
Prupe.5G001900 Prunus persica
Prupe.7G089300 Prunus persica
Psat6g049360 Pisum sativum
Psat6g108920 Pisum sativum
PSO063G0270 Papaver somniferum
PSO198G0144 Papaver somniferum
PSO339G1367 Papaver somniferum
PSO339G4420 Papaver somniferum
PSO339G4950 Papaver somniferum
PSO384G4048 Papaver somniferum
PSO782G1239 Papaver somniferum
QL04p049697 Quercus lobata
QL04p049703 Quercus lobata
QL07p026408 Quercus lobata
QL07p026439 Quercus lobata
RcHm_v2.0_Chr1g0331691 Rosa chinensis
RcHm_v2.0_Chr2g0130591 Rosa chinensis
RcHm_v2.0_Chr3g0477361 Rosa chinensis
Rhsim07G0073700 Rhododendron simsii
Rhsim07G0073800 Rhododendron simsii
Rhsim09G0022800 Rhododendron simsii
Sabra06G0153500 Salix brachista
Sabra16G0067400 Salix brachista
SalBow6G5315 Salvia bowleyana
Sc01g0005660 Simmondsia chinensis
Sc20g0001080 Simmondsia chinensis
Sed0002055 Sechium edule
Sed0016443 Sechium edule
SEGI_12933 Sequoiadendron giganteum
SEGI_19667 Sequoiadendron giganteum
SEGI_39477 Sequoiadendron giganteum
SEGI_41287 Sequoiadendron giganteum
SGA_v2.0_scaffold392G50687 Striga asiatica
SGA_v2.0_scaffold41G15772 Striga asiatica
SMO024G0002 Selaginella moellendorffii
SMO200G0132 Selaginella moellendorffii
SMO270G0063 Selaginella moellendorffii
SMO367G0356 Selaginella moellendorffii
Solyc01g006740.4 Solanum lycopersicum
Solyc10g081660.2 Solanum lycopersicum
Sopen01g002740 Solanum pennellii
Sopen10g032170 Solanum pennellii
Sp1g38100 Schrenkiella parvula
Sp4g18100 Schrenkiella parvula
Sp5g08120 Schrenkiella parvula
Sp5g09940 Schrenkiella parvula
TAR623G0393 Trochodendron aralioides
TAR633G2500 Trochodendron aralioides
TAR636G0665 Trochodendron aralioides
TAR636G2734 Trochodendron aralioides
THA.LOC104808403 Tarenaya hassleriana
Thecc.05G109800 Theobroma cacao
Thecc.10G122800 Theobroma cacao
Thhalv10010361m.g Eutrema salsugineum
Thhalv10010402m.g Eutrema salsugineum
Thhalv10011514m.g Eutrema salsugineum
Thhalv10016712m.g Eutrema salsugineum
Thhalv10023476m.g Eutrema salsugineum
TPR.G19122 Trifolium pratense
TPR.G200 Trifolium pratense
TPR.G21235 Trifolium pratense
TPR.G22042 Trifolium pratense
TPR.G22973 Trifolium pratense
TPR.G23949 Trifolium pratense
TPR.G393 Trifolium pratense
TPR.G39750 Trifolium pratense
TPR.G39751 Trifolium pratense
TPR.G40600 Trifolium pratense
TWI74G0255 Tripterygium wilfordii
TWI75G1026 Tripterygium wilfordii
unitig_8.g4300 Utricularia gibba
vmacro00633 Vaccinium macrocarpon
vmacro13806 Vaccinium macrocarpon
VMungo0251G0687 Vigna mungo
VMungo0464G1445 Vigna mungo
VMungo0647G1591 Vigna mungo
VMungo0720G0461 Vigna mungo
VMungo0720G1475 Vigna mungo
VMungo1383G1154 Vigna mungo
Zm00001eb351280 Zea mays
Zm00001eb417940 Zea mays

User provided reference genes

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