Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13620 Brassica napus
A03p29880 Brassica napus
A05p10240 Brassica napus
A09p26540 Brassica napus
Aa31LG6G4340 Aethionema arabicum
Aa31LG9G15480 Aethionema arabicum
Aa31LG9G9930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.590 Anthoceros agrestis
Actinidia02345 Actinidia chinensis
Actinidia09173 Actinidia chinensis
Actinidia14784 Actinidia chinensis
Actinidia18125 Actinidia chinensis
Actinidia26889 Actinidia chinensis
Ah.07g200830 Amaranthus hybridus
Ah.09g234470 Amaranthus hybridus
AL4G31540 Arabidopsis lyrata
AL6G47760 Arabidopsis lyrata
AL7G31390 Arabidopsis lyrata
Aqoxy1G02915 Aquilegia oxysepala
Aqoxy1G02992 Aquilegia oxysepala
Aqoxy1G04182 Aquilegia oxysepala
Aqoxy3G02205 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2V5SL7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4VY1XX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8TZ93N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WG05AL Arachis hypogaea
AT2G35490 Arabidopsis thaliana
AT4G04020 Arabidopsis thaliana
AT4G22240 Arabidopsis thaliana
ATR0582G301 Amborella trichopoda
ATR0624G044 Amborella trichopoda
ATR0829G030 Amborella trichopoda
Atru.chr10.2317 Acer truncatum
Atru.chr6.1613 Acer truncatum
AUR62007345 Chenopodium quinoa
AUR62012763 Chenopodium quinoa
AUR62018654 Chenopodium quinoa
AUR62021894 Chenopodium quinoa
BcaB01g01781 Brassica carinata
BcaB01g02608 Brassica carinata
BcaB02g09425 Brassica carinata
BcaC01g04570 Brassica carinata
BcaC02g11654 Brassica carinata
BcaC04g21266 Brassica carinata
BcaC09g51148 Brassica carinata
BcaNung03751 Brassica carinata
BolC1t01599H Brassica oleracea
BolC3t15925H Brassica oleracea
BolC4t22917H Brassica oleracea
BolC9t56200H Brassica oleracea
BraA01t01304Z Brassica rapa
BraA03t12178Z Brassica rapa
BraA05t19964Z Brassica rapa
BraA09t38228Z Brassica rapa
C01p16500 Brassica napus
C03p36160 Brassica napus
C04p12690 Brassica napus
C09p33660 Brassica napus
CAN.G1014.51 Capsicum annuum
CAN.G137.5 Capsicum annuum
CAN.G726.26 Capsicum annuum
CANSAT21G1663 Cannabis sativa
CANSAT56G3028 Cannabis sativa
CANSAT56G3737 Cannabis sativa
CARHR129640 Cardamine hirsuta
CARHR229130 Cardamine hirsuta
CARHR253420 Cardamine hirsuta
Carub.0004s1718 Capsella rubella
Carub.0006s3205 Capsella rubella
Carub.0007s1908 Capsella rubella
Ca_00698_v3 Cicer arietinum L.
Ca_25189_v3 Cicer arietinum L.
CBR_g49209 Chara braunii
Cc08_g03380 Coffea canephora
Cc09_g01130 Coffea canephora
CDE02G1255 Ceratophyllum demersum
CDE04G1021 Ceratophyllum demersum
CDE07G0233 Ceratophyllum demersum
CDE11G1086 Ceratophyllum demersum
Cfa000140 Carpinus fangiana
Cfa000141 Carpinus fangiana
Cfa000143 Carpinus fangiana
Cfa012526 Carpinus fangiana
Ciclev10002003m.g Citrus clementina
Ciclev10015934m.g Citrus clementina
CiPaw.09G099600 Carya illinoinensis
CiPaw.12G067500 Carya illinoinensis
ClCG01G021610 Citrullus lanatus
ClCG10G001350 Citrullus lanatus
COL.COLO4_16956 Corchorus olitorius
COL.COLO4_31843 Corchorus olitorius
Cpa.g.c30992.3 Carica papaya
Cpa.g.sc90.8 Carica papaya
Cpa.g.sc90.9 Carica papaya
Cre03.g189300 Chlamydomonas reinhardtii
Cre14.g611450 Chlamydomonas reinhardtii
Cre14.g611700 Chlamydomonas reinhardtii
CsaV3_3G001420 Cucumis sativus L.
CsaV3_6G048650 Cucumis sativus L.
CSS0001852 Camellia sinensis var. sinensis
CSS0013190 Camellia sinensis var. sinensis
CSS0028378 Camellia sinensis var. sinensis
CSS0050044 Camellia sinensis var. sinensis
DCAR_008235 Daucus carota
DCAR_027858 Daucus carota
Dinv13947 Davidia involucrata
Dinv20113 Davidia involucrata
Dinv25249 Davidia involucrata
Duzib192G0327 Durio zibethinus
Duzib205G1709 Durio zibethinus
Duzib235G1028 Durio zibethinus
ECA234G4826 Erigeron canadensis
ECA246G1777 Erigeron canadensis
EL10Ac5g12026 Beta vulgaris
EL10Ac8g20136 Beta vulgaris
Eucgr.D02221 Eucalyptus grandis
Eucgr.E03981 Eucalyptus grandis
FAN04G0881 Fragaria x ananassa
FAN08G1341 Fragaria x ananassa
FAN13G2743 Fragaria x ananassa
FAN18G2745 Fragaria x ananassa
FAN18G4293 Fragaria x ananassa
FAN21G1271 Fragaria x ananassa
FAN25G2064 Fragaria x ananassa
FvH4_3g01310 Fragaria vesca
FvH4_5g22910 Fragaria vesca
Glyma.01G015100 Glycine max
Glyma.09G008100 Glycine max
Glyma.09G207151 Glycine max
Glyma.15G112500 Glycine max
Gohir.A05G174100 Gossypium hirsutum
Gohir.A09G068000 Gossypium hirsutum
Gohir.A09G199900 Gossypium hirsutum
Gohir.D05G177100 Gossypium hirsutum
Gohir.D09G068000 Gossypium hirsutum
Gohir.D09G194200 Gossypium hirsutum
Gorai.006G082400 Gossypium raimondii
Gorai.006G217700 Gossypium raimondii
Gorai.009G182500 Gossypium raimondii
GSVIVG01013072001 Vitis vinifera
HanXRQChr06g0172671 Helianthus annuus
HanXRQChr13g0394891 Helianthus annuus
HanXRQChr16g0516891 Helianthus annuus
HanXRQChr17g0558841 Helianthus annuus
Haze_06884 Corylus avellana
Haze_08136 Corylus avellana
Hma1.2p1_0572F.1_g181250 Hydrangea macrophylla
Hma1.2p1_1358F.1_g278010 Hydrangea macrophylla
HPP92_003058 Vanilla planifolia
HPP92_020804 Vanilla planifolia
Hund11194 Selenicereus undatus
Hund14366 Selenicereus undatus
Hund21439 Selenicereus undatus
Hund23427 Selenicereus undatus
Lalb_Chr16g0381141 Lupinus albus
Lalb_Chr18g0056791 Lupinus albus
Lalb_Chr18g0056811 Lupinus albus
Lalb_Chr20g0119121 Lupinus albus
Lalb_Chr20g0119131 Lupinus albus
Lj1A1237T45 Lonicera japonica
Lj2A233G30 Lonicera japonica
Lj2A263T48 Lonicera japonica
Lj2g0015926 Lotus japonicus
Lj6g0013923 Lotus japonicus
Lsat_1_v5_gn_3_19641 Lactuca sativa
Lsat_1_v5_gn_4_62881 Lactuca sativa
Lsat_1_v5_gn_6_91661 Lactuca sativa
Manes.16G002400 Manihot esculenta
Manes.17G014600 Manihot esculenta
Mapoly0070s0031 Marchantia polymorpha
MBI19_g03680_MAGBIO Magnolia biondii
MCO15G028 Micromonas commoda
MD06G1025700 Malus domestica
MD10G1327900 Malus domestica
MD16G1280700 Malus domestica
Medtr1g099880 Medicago truncatula
Medtr2g025040 Medicago truncatula
Medtr2g025050 Medicago truncatula
Medtr5g029590 Medicago truncatula
MELO3C007423.2 Cucumis melo
MELO3C013828.2 Cucumis melo
Migut.A01084 Erythranthe guttata
Migut.H01594 Erythranthe guttata
Migut.M01365 Erythranthe guttata
MSTRG.12171 Avicennia marina
MSTRG.13126 Avicennia marina
MSTRG.14623 Avicennia marina
Nitab4.5_0000529g0070 Nicotiana tabacum
Nitab4.5_0000556g0170 Nicotiana tabacum
Nitab4.5_0000809g0050 Nicotiana tabacum
Nitab4.5_0002778g0050 Nicotiana tabacum
Nitab4.5_0002778g0060 Nicotiana tabacum
Nitab4.5_0004821g0050 Nicotiana tabacum
Nitab4.5_0014185g0010 Nicotiana tabacum
Nn1g02480 Nelumbo nucifera
Nn1g03376 Nelumbo nucifera
Nn1g07300 Nelumbo nucifera
Nn3g17640 Nelumbo nucifera
Nn3g19404 Nelumbo nucifera
Oeu004527.1 Olea europaea
Oeu007156.1 Olea europaea
Oeu026233.1 Olea europaea
Oeu028866.1 Olea europaea
Oeu049701.1 Olea europaea
Oeu049704.1 Olea europaea
Oeu049711.1 Olea europaea
Oeu051879.2 Olea europaea
Os09g0133600 Oryza sativa ssp. japonica
Os10g0575700 Oryza sativa ssp. japonica
Peaxi162Scf00045g00227 Petunia axillaris
Peaxi162Scf00170g00819 Petunia axillaris
Peaxi162Scf00708g00012 Petunia axillaris
PGR031G3822 Punica granatum
PGR042G0551 Punica granatum
PGSC0003DMG400003485 Solanum tuberosum
PGSC0003DMG400016727 Solanum tuberosum
PGSC0003DMG400021072 Solanum tuberosum
PGSC0003DMG402014796 Solanum tuberosum
Phvul.002G137800 Phaseolus vulgaris
Phvul.006G145100 Phaseolus vulgaris
Potri.001G137900 Populus trichocarpa
Potri.003G095900 Populus trichocarpa
Potri.004G003200 Populus trichocarpa
Pp3c15_4460 Physcomitrium patens
Pp3c20_16440 Physcomitrium patens
Pp3c9_8570 Physcomitrium patens
PRCOL_00001829 Prasinoderma coloniale
Prupe.4G014000 Prunus persica
Prupe.5G029300 Prunus persica
Psat1g177680 Pisum sativum
Psat2g138880 Pisum sativum
Psat6g091120 Pisum sativum
Psat7g137600 Pisum sativum
Psat7g137720 Pisum sativum
PSO063G3420 Papaver somniferum
PSO210G7268 Papaver somniferum
PSO782G4319 Papaver somniferum
QL05p070215 Quercus lobata
QL05p070232 Quercus lobata
QL05p070275 Quercus lobata
QL05p070719 Quercus lobata
QL05p070734 Quercus lobata
QL12p001328 Quercus lobata
RcHm_v2.0_Chr5g0001851 Rosa chinensis
RcHm_v2.0_Chr7g0211641 Rosa chinensis
Rhsim07G0131300 Rhododendron simsii
Rhsim11G0020200 Rhododendron simsii
Rhsim13G0149600 Rhododendron simsii
Sabra03G0064700 Salix brachista
Sabra04G0001800 Salix brachista
SalBow6G4971 Salvia bowleyana
SalBow8G1590 Salvia bowleyana
Sc01g0007250 Simmondsia chinensis
Sc04g0001050 Simmondsia chinensis
Sc05g0002910 Simmondsia chinensis
Sc05g0009470 Simmondsia chinensis
Sed0005477 Sechium edule
Sed0016690 Sechium edule
Sed0022749 Sechium edule
SEGI_07464 Sequoiadendron giganteum
SEGI_22906 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41081 Striga asiatica
SGA_v2.0_scaffold89G27489 Striga asiatica
SMO367G0795 Selaginella moellendorffii
Solyc02g081170.4 Solanum lycopersicum
Solyc08g005220.4 Solanum lycopersicum
Solyc08g076480.3 Solanum lycopersicum
Sopen02g025810 Solanum pennellii
Sopen08g001250 Solanum pennellii
Sopen08g025060 Solanum pennellii
Sp4g17710 Schrenkiella parvula
Sp6g04720 Schrenkiella parvula
Sp7g20360 Schrenkiella parvula
TAR119G0001 Trochodendron aralioides
TAR375G0159 Trochodendron aralioides
TAR629G0004 Trochodendron aralioides
TAR629G0932 Trochodendron aralioides
TAR629G2374 Trochodendron aralioides
THA.LOC104798488 Tarenaya hassleriana
THA.LOC104806323 Tarenaya hassleriana
THA.LOC104812983 Tarenaya hassleriana
Thecc.03G308900 Theobroma cacao
Thecc.06G229400 Theobroma cacao
Thhalv10016800m.g Eutrema salsugineum
Thhalv10025758m.g Eutrema salsugineum
Thhalv10028808m.g Eutrema salsugineum
TPR.G12999 Trifolium pratense
TPR.G8085 Trifolium pratense
TWI38G0652 Tripterygium wilfordii
TWI81G0224 Tripterygium wilfordii
unitig_21.g20237 Utricularia gibba
unitig_744.g24517 Utricularia gibba
unitig_748.g7547 Utricularia gibba
vmacro00289 Vaccinium macrocarpon
vmacro03660 Vaccinium macrocarpon
vmacro14194 Vaccinium macrocarpon
VMungo0540G1384 Vigna mungo
VMungo1215G0334 Vigna mungo
Zm00001eb024700 Zea mays
Zm00001eb081140 Zea mays
Zm00001eb423920 Zea mays

User provided reference genes

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