Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p17190 Brassica napus
A04p17220 Brassica napus
A06p31230 Brassica napus
A06p32550 Brassica napus
Aa31LG1G16380 Aethionema arabicum
Aa31LG1G17420 Aethionema arabicum
Aa31LG3G17430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2431 Anthoceros agrestis
Actinidia00330 Actinidia chinensis
Actinidia02417 Actinidia chinensis
Actinidia28013 Actinidia chinensis
Ah.01g007280 Amaranthus hybridus
Ah.01g024260 Amaranthus hybridus
AL4G12260 Arabidopsis lyrata
AL8G41870 Arabidopsis lyrata
AL8G43330 Arabidopsis lyrata
Aqoxy5G01949 Aquilegia oxysepala
Aqoxy6G00612 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.17RMDD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3JL5SH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4154AG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.490VQK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5Q6UX6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6HDK8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.82FJQ3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8W8L97 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9BGN79 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A6JGZ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CGU3LY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FCYV2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IR8RDL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JCX60N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JM8NV3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LE8CD7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MS7TEX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PIK10Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W8PLG7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X38HVK Arachis hypogaea
AT2G22730 Arabidopsis thaliana
AT5G64500 Arabidopsis thaliana
AT5G65687 Arabidopsis thaliana
ATR0767G051 Amborella trichopoda
Atru.chr3.1123 Acer truncatum
Atru.chr3.1132 Acer truncatum
Atru.chr6.1392 Acer truncatum
AUR62027068 Chenopodium quinoa
AUR62030909 Chenopodium quinoa
BcaB06g27819 Brassica carinata
BcaC01g02813 Brassica carinata
BcaC01g02844 Brassica carinata
BcaC02g08613 Brassica carinata
BolC3t18264H Brassica oleracea
BolC3t18436H Brassica oleracea
BolC4t26777H Brassica oleracea
BraA04t17350Z Brassica rapa
BraA06t26062Z Brassica rapa
BraA06t26184Z Brassica rapa
C03p60000 Brassica napus
C03p61750 Brassica napus
C04p52030 Brassica napus
C04p52040 Brassica napus
CAN.G504.60 Capsicum annuum
CAN.G730.43 Capsicum annuum
CANSAT01G2750 Cannabis sativa
CANSAT54G0303 Cannabis sativa
CARHR114010 Cardamine hirsuta
CARHR278460 Cardamine hirsuta
CARHR279660 Cardamine hirsuta
Carub.0004s0186 Capsella rubella
Carub.0008s2529 Capsella rubella
Carub.0008s2657 Capsella rubella
Ca_00189_v3 Cicer arietinum L.
Ca_06075_v3 Cicer arietinum L.
Ca_18420_v3 Cicer arietinum L.
Ca_18435_v3 Cicer arietinum L.
CBR_g20167 Chara braunii
Cc02_g20470 Coffea canephora
CDE04G2960 Ceratophyllum demersum
Cfa006812 Carpinus fangiana
Ciclev10025309m.g Citrus clementina
Ciclev10028184m.g Citrus clementina
CiPaw.05G025500 Carya illinoinensis
CiPaw.07G041300 Carya illinoinensis
ClCG09G016360 Citrullus lanatus
ClCG10G009740 Citrullus lanatus
COL.COLO4_11663 Corchorus olitorius
Cpa.g.sc129.32 Carica papaya
Cre01.g000950 Chlamydomonas reinhardtii
Cre06.g301550 Chlamydomonas reinhardtii
CsaV3_4G014620 Cucumis sativus L.
CsaV3_7G007270 Cucumis sativus L.
CSS0005389 Camellia sinensis var. sinensis
CSS0019136 Camellia sinensis var. sinensis
CSS0029401 Camellia sinensis var. sinensis
CSS0038013 Camellia sinensis var. sinensis
DCAR_021889 Daucus carota
DCAR_029185 Daucus carota
Dinv08955 Davidia involucrata
Duzib132G0498 Durio zibethinus
Duzib147G1437 Durio zibethinus
Duzib187G0375 Durio zibethinus
Duzib248G0456 Durio zibethinus
ECA236G0003 Erigeron canadensis
ECA236G4660 Erigeron canadensis
ECA240G0113 Erigeron canadensis
ECA240G0630 Erigeron canadensis
ECA240G1336 Erigeron canadensis
ECA240G1871 Erigeron canadensis
ECA240G4125 Erigeron canadensis
ECA240G4188 Erigeron canadensis
EL10Ac9g22138 Beta vulgaris
Eucgr.G01111 Eucalyptus grandis
Eucgr.I00633 Eucalyptus grandis
FAN02G2655 Fragaria x ananassa
FAN14G2112 Fragaria x ananassa
FAN15G3296 Fragaria x ananassa
FAN15G3754 Fragaria x ananassa
FAN19G0940 Fragaria x ananassa
FAN20G0748 Fragaria x ananassa
FAN24G0514 Fragaria x ananassa
FAN24G1657 Fragaria x ananassa
FAN24G1868 Fragaria x ananassa
FAN24G2386 Fragaria x ananassa
FAN27G0548 Fragaria x ananassa
FvH4_1g18801 Fragaria vesca
FvH4_2g10930 Fragaria vesca
FvH4_2g10950 Fragaria vesca
FvH4_6g42030 Fragaria vesca
Glyma.07G184900 Glycine max
Glyma.08G064500 Glycine max
Glyma.09G203800 Glycine max
Glyma.13G253700 Glycine max
Glyma.15G061200 Glycine max
Gohir.A01G178800 Gossypium hirsutum
Gohir.A02G147200 Gossypium hirsutum
Gohir.A11G209700 Gossypium hirsutum
Gohir.A12G081900 Gossypium hirsutum
Gohir.D01G169600 Gossypium hirsutum
Gohir.D03G033200 Gossypium hirsutum
Gohir.D11G213300 Gossypium hirsutum
Gohir.D12G078900 Gossypium hirsutum
Gorai.002G211200 Gossypium raimondii
Gorai.003G034800 Gossypium raimondii
Gorai.007G229300 Gossypium raimondii
Gorai.008G087800 Gossypium raimondii
GSVIVG01003705001 Vitis vinifera
GSVIVG01005670001 Vitis vinifera
HanXRQChr03g0068491 Helianthus annuus
HanXRQChr03g0068501 Helianthus annuus
HanXRQChr05g0150341 Helianthus annuus
HanXRQChr05g0150351 Helianthus annuus
HanXRQChr08g0227141 Helianthus annuus
Haze_03947 Corylus avellana
Haze_10377 Corylus avellana
Hma1.2p1_0435F.1_g152520 Hydrangea macrophylla
HPP92_008569 Vanilla planifolia
HPP92_008570 Vanilla planifolia
Hund00405 Selenicereus undatus
Hund06484 Selenicereus undatus
Hund16609 Selenicereus undatus
Lalb_Chr16g0381401 Lupinus albus
Lalb_Chr16g0383151 Lupinus albus
Lalb_Chr18g0060241 Lupinus albus
Lj2g0001032 Lotus japonicus
Lj4g0009340 Lotus japonicus
Lj5C224G10 Lonicera japonica
Lj6g0001905 Lotus japonicus
Lj9A341T46 Lonicera japonica
Lsat_1_v5_gn_7_83260 Lactuca sativa
Lsat_1_v5_gn_9_114121 Lactuca sativa
Lsat_1_v5_gn_9_114141 Lactuca sativa
Lsat_1_v5_gn_9_114321 Lactuca sativa
Lsat_1_v5_gn_9_114341 Lactuca sativa
Lsat_1_v5_gn_9_114401 Lactuca sativa
Lsat_1_v5_gn_9_114421 Lactuca sativa
Manes.10G091400 Manihot esculenta
Manes.13G105400 Manihot esculenta
Mapoly0041s0080 Marchantia polymorpha
MBI16_g41328_MAGBIO Magnolia biondii
MCO16G208 Micromonas commoda
MD01G1046600 Malus domestica
MD05G1050900 Malus domestica
MD10G1058300 Malus domestica
MD12G1201800 Malus domestica
MD16G1281900 Malus domestica
Medtr2g010350 Medicago truncatula
Medtr2g010370 Medicago truncatula
Medtr4g092770 Medicago truncatula
Medtr5g030580 Medicago truncatula
MELO3C018040.2 Cucumis melo
MELO3C018571.2 Cucumis melo
Migut.B00509 Erythranthe guttata
Nitab4.5_0000001g0440 Nicotiana tabacum
Nitab4.5_0000693g0070 Nicotiana tabacum
Nitab4.5_0009020g0060 Nicotiana tabacum
Nitab4.5_0012886g0010 Nicotiana tabacum
Nn4g23657 Nelumbo nucifera
Nn5g29739 Nelumbo nucifera
Nn5g29740 Nelumbo nucifera
Oeu010486.4 Olea europaea
Oeu014211.1 Olea europaea
Oeu025234.1 Olea europaea
Oeu030853.1 Olea europaea
Oeu059879.1 Olea europaea
Oeu059880.1 Olea europaea
Os04g0525900 Oryza sativa ssp. japonica
Peaxi162Scf00152g00725 Petunia axillaris
Peaxi162Scf00299g00232 Petunia axillaris
PGR042G3368 Punica granatum
PGR102G1161 Punica granatum
PGSC0003DMG400007588 Solanum tuberosum
PGSC0003DMG401001132 Solanum tuberosum
PGSC0003DMG402001132 Solanum tuberosum
Phvul.002G138900 Phaseolus vulgaris
Phvul.002G216300 Phaseolus vulgaris
Phvul.006G198600 Phaseolus vulgaris
Potri.001G286600 Populus trichocarpa
Potri.009G081100 Populus trichocarpa
Pp3c11_8840 Physcomitrium patens
Pp3c2_28260 Physcomitrium patens
PRCOL_00003607 Prasinoderma coloniale
PRCOL_00004321 Prasinoderma coloniale
Prupe.6G211400 Prunus persica
Prupe.8G077700 Prunus persica
Psat0s3866g0040 Pisum sativum
Psat0s4221g0080 Pisum sativum
Psat1g212400 Pisum sativum
Psat2g136040 Pisum sativum
Psat4g220440 Pisum sativum
Psat7g103800 Pisum sativum
Psat7g103840 Pisum sativum
PSO210G2996 Papaver somniferum
PSO210G5164 Papaver somniferum
PSO478G3444 Papaver somniferum
PSO541G6213 Papaver somniferum
PSO675G4887 Papaver somniferum
PSO761G0567 Papaver somniferum
QL06p037740 Quercus lobata
QL11p027491 Quercus lobata
RcHm_v2.0_Chr2g0109661 Rosa chinensis
RcHm_v2.0_Chr2g0157961 Rosa chinensis
RcHm_v2.0_Chr6g0254471 Rosa chinensis
RcHm_v2.0_Chr6g0269131 Rosa chinensis
RcHm_v2.0_Chr6g0269161 Rosa chinensis
RcHm_v2.0_Chr6g0275801 Rosa chinensis
RcHm_v2.0_Chr6g0281511 Rosa chinensis
Rhsim05G0095000 Rhododendron simsii
Rhsim06G0207000 Rhododendron simsii
Rhsim11G0144900 Rhododendron simsii
Rhsim11G0145100 Rhododendron simsii
Sabra09G0062700 Salix brachista
Sabra16G0179200 Salix brachista
SalBow6G2755 Salvia bowleyana
Sc17g0004000 Simmondsia chinensis
Sc18g0007260 Simmondsia chinensis
Sed0007239 Sechium edule
Sed0009533 Sechium edule
SEGI_04393 Sequoiadendron giganteum
SEGI_07519 Sequoiadendron giganteum
SGA_v2.0_scaffold342G49415 Striga asiatica
SHI04912 Sapria himalayana
SHI04913 Sapria himalayana
SMO364G0889 Selaginella moellendorffii
Solyc01g106420.3 Solanum lycopersicum
Solyc11g044270.3 Solanum lycopersicum
Solyc11g044280.1 Solanum lycopersicum
Sopen01g048790 Solanum pennellii
Sopen11g019760 Solanum pennellii
Sp2g27580 Schrenkiella parvula
Sp2g28780 Schrenkiella parvula
Sp4g01720 Schrenkiella parvula
TAR376G1179 Trochodendron aralioides
TAR381G0161 Trochodendron aralioides
THA.LOC104798437 Tarenaya hassleriana
THA.LOC104799635 Tarenaya hassleriana
THA.LOC104807652 Tarenaya hassleriana
THA.LOC104818457 Tarenaya hassleriana
Thecc.01G081800 Theobroma cacao
Thecc.02G036900 Theobroma cacao
Thhalv10000128m.g Eutrema salsugineum
Thhalv10004075m.g Eutrema salsugineum
Thhalv10004097m.g Eutrema salsugineum
TPR.G1007 Trifolium pratense
TPR.G16874 Trifolium pratense
TPR.G32614 Trifolium pratense
TPR.G32629 Trifolium pratense
TPR.G36632 Trifolium pratense
TPR.G40437 Trifolium pratense
TWI23G1146 Tripterygium wilfordii
TWI74G0946 Tripterygium wilfordii
unitig_21.g20706 Utricularia gibba
unitig_22.g6839 Utricularia gibba
unitig_8.g3415 Utricularia gibba
vmacro01906 Vaccinium macrocarpon
vmacro01907 Vaccinium macrocarpon
vmacro01908 Vaccinium macrocarpon
vmacro01909 Vaccinium macrocarpon
vmacro19588 Vaccinium macrocarpon
VMungo0540G2309 Vigna mungo
VMungo1215G0961 Vigna mungo
Zm00001eb076780 Zea mays
Zm00001eb329120 Zea mays
Zm00001eb427000 Zea mays

User provided reference genes

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