Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p15010 Brassica napus
A08p30190 Brassica napus
Aa31LG4G4810 Aethionema arabicum
Aa31LG7G3580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3766 Anthoceros agrestis
Actinidia02718 Actinidia chinensis
Actinidia04903 Actinidia chinensis
Actinidia17545 Actinidia chinensis
Actinidia34993 Actinidia chinensis
Aqoxy3G00671 Aquilegia oxysepala
Aqoxy3G03360 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.92UJ4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H1K325 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KN44Z3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N4LNLK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XR645Q Arachis hypogaea
AT1G18800 Arabidopsis thaliana
AT1G74560 Arabidopsis thaliana
ATR0307G045 Amborella trichopoda
ATR0564G339 Amborella trichopoda
Atru.chr9.2263 Acer truncatum
AUR62008389 Chenopodium quinoa
AUR62021710 Chenopodium quinoa
BcaB03g12955 Brassica carinata
BcaB05g24859 Brassica carinata
BcaB07g31895 Brassica carinata
BcaB07g31897 Brassica carinata
BcaB07g32214 Brassica carinata
BcaC05g25778 Brassica carinata
BcaC07g38948 Brassica carinata
BolC5t30420H Brassica oleracea
BolC8t49519H Brassica oleracea
BraA06t24617Z Brassica rapa
BraA08t34953Z Brassica rapa
C03p37350 Brassica napus
C05p17180 Brassica napus
C08p18930 Brassica napus
CAN.G350.10 Capsicum annuum
CAN.G628.24 Capsicum annuum
CAN.G653.12 Capsicum annuum
CAN.G666.4 Capsicum annuum
CAN.G666.5 Capsicum annuum
CAN.G685.12 Capsicum annuum
CAN.G837.7 Capsicum annuum
CANSAT64G2779 Cannabis sativa
CANSAT80G1267 Cannabis sativa
CARHR019450 Cardamine hirsuta
CARHR067840 Cardamine hirsuta
Carub.0001s1844 Capsella rubella
Carub.0002s2136 Capsella rubella
Ca_13690_v3 Cicer arietinum L.
Ca_21827_v3 Cicer arietinum L.
CBR_g50658 Chara braunii
Cc04_g16820 Coffea canephora
Cc07_g03300 Coffea canephora
CDE02G1708 Ceratophyllum demersum
CDE04G2856 Ceratophyllum demersum
CDE05G2164 Ceratophyllum demersum
CDE08G0599 Ceratophyllum demersum
CDE09G0029 Ceratophyllum demersum
Cfa007538 Carpinus fangiana
Cfa018956 Carpinus fangiana
Cfa023969 Carpinus fangiana
Ciclev10012281m.g Citrus clementina
Ciclev10021771m.g Citrus clementina
CiPaw.03G027800 Carya illinoinensis
CiPaw.04G018000 Carya illinoinensis
CiPaw.11G043100 Carya illinoinensis
CiPaw.12G014000 Carya illinoinensis
ClCG04G012350 Citrullus lanatus
ClCG09G018310 Citrullus lanatus
COL.COLO4_24534 Corchorus olitorius
Cpa.g.sc14.7 Carica papaya
Cpa.g.sc14.8 Carica papaya
Cpa.g.sc1815.1 Carica papaya
Cpa.g.sc51.160 Carica papaya
Cre06.g307600 Chlamydomonas reinhardtii
CsaV3_1G005360 Cucumis sativus L.
CsaV3_5G037970 Cucumis sativus L.
CSS0006226 Camellia sinensis var. sinensis
CSS0009926 Camellia sinensis var. sinensis
CSS0029985 Camellia sinensis var. sinensis
CSS0035370 Camellia sinensis var. sinensis
DCAR_016543 Daucus carota
DCAR_021659 Daucus carota
DCAR_026044 Daucus carota
Dinv06540 Davidia involucrata
Dinv19954 Davidia involucrata
Dinv33751 Davidia involucrata
Dinv38697 Davidia involucrata
Duzib068G0159 Durio zibethinus
Duzib084G0290 Durio zibethinus
Duzib205G0292 Durio zibethinus
ECA246G4691 Erigeron canadensis
ECA247G0710 Erigeron canadensis
EL10Ac5g10983 Beta vulgaris
Eucgr.B00479 Eucalyptus grandis
Eucgr.K02468 Eucalyptus grandis
FAN02G0056 Fragaria x ananassa
FAN04G2256 Fragaria x ananassa
FAN05G2044 Fragaria x ananassa
FAN08G2146 Fragaria x ananassa
FAN09G2748 Fragaria x ananassa
FAN13G1964 Fragaria x ananassa
FAN18G4204 Fragaria x ananassa
FvH4_5g15130 Fragaria vesca
FvH4_6g48860 Fragaria vesca
FvH4_6g48871 Fragaria vesca
Glyma.03G042100 Glycine max
Glyma.03G042200 Glycine max
Glyma.04G170400 Glycine max
Glyma.05G027300 Glycine max
Glyma.06G193200 Glycine max
Glyma.07G161400 Glycine max
Glyma.17G099200 Glycine max
Gohir.A03G066000 Gossypium hirsutum
Gohir.A03G066100 Gossypium hirsutum
Gohir.A07G063700 Gossypium hirsutum
Gohir.A11G030791 Gossypium hirsutum
Gohir.D03G092500 Gossypium hirsutum
Gohir.D03G092600 Gossypium hirsutum
Gohir.D07G068500 Gossypium hirsutum
Gohir.D11G034100 Gossypium hirsutum
Gorai.001G072000 Gossypium raimondii
Gorai.003G096300 Gossypium raimondii
Gorai.003G096500 Gossypium raimondii
Gorai.007G036900 Gossypium raimondii
GSVIVG01008022001 Vitis vinifera
GSVIVG01011390001 Vitis vinifera
HanXRQChr02g0041081 Helianthus annuus
HanXRQChr05g0158121 Helianthus annuus
HanXRQChr08g0234901 Helianthus annuus
HanXRQChr09g0270731 Helianthus annuus
Haze_07338 Corylus avellana
Haze_14548 Corylus avellana
Hma1.2p1_0735F.1_g210550 Hydrangea macrophylla
HPP92_003163 Vanilla planifolia
HPP92_003164 Vanilla planifolia
HPP92_013055 Vanilla planifolia
HPP92_013063 Vanilla planifolia
Hund02658 Selenicereus undatus
Hund09355 Selenicereus undatus
Lalb_Chr07g0177991 Lupinus albus
Lalb_Chr08g0235791 Lupinus albus
Lalb_Chr13g0303281 Lupinus albus
Lalb_Chr23g0273831 Lupinus albus
Lj1g0021417 Lotus japonicus
Lj3g0020931 Lotus japonicus
Lj5A112G61 Lonicera japonica
Lj9A462G77 Lonicera japonica
Lju41A18T42 Lonicera japonica
Lju41C18T3 Lonicera japonica
Lsat_1_v5_gn_1_13261 Lactuca sativa
Lsat_1_v5_gn_5_20001 Lactuca sativa
Manes.06G093700 Manihot esculenta
Manes.14G077300 Manihot esculenta
Mapoly0024s0061 Marchantia polymorpha
MBI02_g23684_MAGBIO Magnolia biondii
MBI05_g35445_MAGBIO Magnolia biondii
MBI13_g15008_MAGBIO Magnolia biondii
MBI18_g31321_MAGBIO Magnolia biondii
MD06G1191900 Malus domestica
MD09G1050000 Malus domestica
MD14G1198400 Malus domestica
MD17G1050400 Malus domestica
Medtr0240s0030 Medicago truncatula
Medtr3g040400 Medicago truncatula
Medtr4g108570 Medicago truncatula
Medtr4g115160 Medicago truncatula
Medtr4g115820 Medicago truncatula
Medtr6g090475 Medicago truncatula
MELO3C001973.2 Cucumis melo
MELO3C021984.2 Cucumis melo
Migut.D01826 Erythranthe guttata
Migut.H00914 Erythranthe guttata
Migut.I00166 Erythranthe guttata
Migut.L00529 Erythranthe guttata
MSTRG.11387 Avicennia marina
MSTRG.9631 Avicennia marina
Nitab4.5_0000023g0310 Nicotiana tabacum
Nitab4.5_0000026g0060 Nicotiana tabacum
Nitab4.5_0000269g0040 Nicotiana tabacum
Nitab4.5_0000274g0140 Nicotiana tabacum
Nitab4.5_0001188g0030 Nicotiana tabacum
Nitab4.5_0002298g0080 Nicotiana tabacum
Nitab4.5_0005983g0040 Nicotiana tabacum
Nitab4.5_0008408g0030 Nicotiana tabacum
Nitab4.5_0008527g0030 Nicotiana tabacum
Nn3g17217 Nelumbo nucifera
Nn4g23140 Nelumbo nucifera
Oeu000928.2 Olea europaea
Oeu010874.1 Olea europaea
Oeu016165.2 Olea europaea
Oeu022204.1 Olea europaea
Oeu047017.2 Olea europaea
Oeu060939.1 Olea europaea
Os02g0576700 Oryza sativa ssp. japonica
Os04g0459700 Oryza sativa ssp. japonica
Peaxi162Scf00013g00227 Petunia axillaris
Peaxi162Scf00103g00113 Petunia axillaris
Peaxi162Scf00777g00519 Petunia axillaris
PGR044G1847 Punica granatum
PGR083G1391 Punica granatum
PGSC0003DMG400006933 Solanum tuberosum
PGSC0003DMG400014535 Solanum tuberosum
PGSC0003DMG400019515 Solanum tuberosum
PGSC0003DMG400021925 Solanum tuberosum
PGSC0003DMG400033079 Solanum tuberosum
Phvul.003G190800 Phaseolus vulgaris
Phvul.009G188000 Phaseolus vulgaris
Potri.004G128701 Populus trichocarpa
Potri.012G069100 Populus trichocarpa
Potri.015G062700 Populus trichocarpa
Potri.017G080700 Populus trichocarpa
Pp3c18_15740 Physcomitrium patens
Pp3c18_15811 Physcomitrium patens
Prupe.3G268700 Prunus persica
Prupe.5G191400 Prunus persica
Psat4g051520 Pisum sativum
Psat5g184360 Pisum sativum
PSO017G0102 Papaver somniferum
PSO017G0376 Papaver somniferum
PSO017G4174 Papaver somniferum
PSO170G2841 Papaver somniferum
PSO210G4053 Papaver somniferum
PSO407G0195 Papaver somniferum
PSO421G0345 Papaver somniferum
PSO478G2432 Papaver somniferum
PSO478G4535 Papaver somniferum
PSO532G0017 Papaver somniferum
PSO541G0201 Papaver somniferum
PSO541G2593 Papaver somniferum
PSO541G2894 Papaver somniferum
PSO541G5301 Papaver somniferum
PSO782G1052 Papaver somniferum
PSO782G2053 Papaver somniferum
PSO782G2781 Papaver somniferum
QL02p081670 Quercus lobata
QL10p016583 Quercus lobata
RcHm_v2.0_Chr2g0168701 Rosa chinensis
RcHm_v2.0_Chr7g0181051 Rosa chinensis
Rhsim08G0068800 Rhododendron simsii
Rhsim08G0156200 Rhododendron simsii
Rhsim12G0157000 Rhododendron simsii
Sabra12G0049300 Salix brachista
Sabra15G0088000 Salix brachista
Sabra17G0072100 Salix brachista
SalBow7G1407 Salvia bowleyana
Sc10g0009910 Simmondsia chinensis
Sc12g0006300 Simmondsia chinensis
Sed0003290 Sechium edule
Sed0012479 Sechium edule
Sed0018112 Sechium edule
Sed0018970 Sechium edule
SEGI_05816 Sequoiadendron giganteum
SEGI_14395 Sequoiadendron giganteum
SEGI_24013 Sequoiadendron giganteum
SEGI_41198 Sequoiadendron giganteum
SGA_v2.0_scaffold110G31265 Striga asiatica
SGA_v2.0_scaffold114G31901 Striga asiatica
SGA_v2.0_scaffold59G20686 Striga asiatica
SGA_v2.0_scaffold7G03970 Striga asiatica
SGA_v2.0_scaffold7G04070 Striga asiatica
SMO119G0206 Selaginella moellendorffii
Solyc02g021350.4 Solanum lycopersicum
Solyc02g067370.4 Solanum lycopersicum
Solyc06g069890.4 Solanum lycopersicum
Solyc12g077660.3 Solanum lycopersicum
Solyc12g077680.1 Solanum lycopersicum
Sopen02g005820 Solanum pennellii
Sopen02g016510 Solanum pennellii
Sopen03g035140 Solanum pennellii
Sopen06g027160 Solanum pennellii
Sopen12g027460 Solanum pennellii
Sp1g16780 Schrenkiella parvula
TAR371G1291 Trochodendron aralioides
TAR374G0323 Trochodendron aralioides
TAR622G0098 Trochodendron aralioides
TAR629G3454 Trochodendron aralioides
THA.LOC104812548 Tarenaya hassleriana
THA.LOC104813877 Tarenaya hassleriana
Thecc.03G084800 Theobroma cacao
Thhalv10008524m.g Eutrema salsugineum
Thhalv10019016m.g Eutrema salsugineum
Thhalv10019538m.g Eutrema salsugineum
TPR.G11820 Trifolium pratense
TPR.G15218 Trifolium pratense
TPR.G15257 Trifolium pratense
TPR.G16963 Trifolium pratense
TPR.G26864 Trifolium pratense
TPR.G26870 Trifolium pratense
TPR.G34735 Trifolium pratense
TPR.G7573 Trifolium pratense
TWI15G0563 Tripterygium wilfordii
TWI60G0412 Tripterygium wilfordii
TWI81G0026 Tripterygium wilfordii
unitig_0.g779 Utricularia gibba
unitig_26.g9642 Utricularia gibba
vmacro16553 Vaccinium macrocarpon
vmacro18194 Vaccinium macrocarpon
VMungo1215G0373 Vigna mungo
VMungo1309G1659 Vigna mungo
Zm00001eb183010 Zea mays
Zm00001eb244920 Zea mays

User provided reference genes

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