Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03370 Brassica napus
A03p62670 Brassica napus
A09p19250 Brassica napus
Aa31LG2G14730 Aethionema arabicum
Aa31LG2G16650 Aethionema arabicum
Actinidia00417 Actinidia chinensis
Ah.01g010780 Amaranthus hybridus
Ah.01g018060 Amaranthus hybridus
AL1G52360 Arabidopsis lyrata
AL310U10010 Arabidopsis lyrata
AL7G15960 Arabidopsis lyrata
AL7G17140 Arabidopsis lyrata
Aqoxy3G01782 Aquilegia oxysepala
Aqoxy5G01159 Aquilegia oxysepala
Aqoxy6G02889 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.02K5W7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CNFV5P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F6J9N2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JCFS2J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PAK942 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q7RPPP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VKM1BH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YC4BVH Arachis hypogaea
AT1G44542 Arabidopsis thaliana
AT4G34180 Arabidopsis thaliana
AT4G35220 Arabidopsis thaliana
ATR0724G073 Amborella trichopoda
ATR0827G110 Amborella trichopoda
Atru.chr1.2158 Acer truncatum
Atru.chr2.3654 Acer truncatum
Atru.chr5.2573 Acer truncatum
Atru.chr5.2574 Acer truncatum
Atru.chr5.2589 Acer truncatum
Atru.chr5.2591 Acer truncatum
Atru.chr5.2790 Acer truncatum
AUR62010275 Chenopodium quinoa
AUR62010276 Chenopodium quinoa
AUR62013254 Chenopodium quinoa
AUR62013255 Chenopodium quinoa
AUR62037857 Chenopodium quinoa
AUR62044360 Chenopodium quinoa
BcaB03g15935 Brassica carinata
BcaB07g31109 Brassica carinata
BcaC04g22035 Brassica carinata
BcaNung00618 Brassica carinata
BcaNung00622 Brassica carinata
BcaNung03366 Brassica carinata
BcaNung05141 Brassica carinata
BcaNung05145 Brassica carinata
BolC1t00297H Brassica oleracea
BolC1t00360H Brassica oleracea
BolC7t46463H Brassica oleracea
BolC9t55343H Brassica oleracea
BraA01t00323Z Brassica rapa
BraA03t15337Z Brassica rapa
BraA09t37543Z Brassica rapa
C01p03120 Brassica napus
C01p03680 Brassica napus
C07p60220 Brassica napus
C09p24260 Brassica napus
CAN.G1231.14 Capsicum annuum
CAN.G193.29 Capsicum annuum
CANSAT25G1013 Cannabis sativa
CARHR242620 Cardamine hirsuta
CARHR242630 Cardamine hirsuta
CARHR243520 Cardamine hirsuta
Carub.0001s3520 Capsella rubella
Carub.0007s0509 Capsella rubella
Carub.0007s0620 Capsella rubella
Ca_11086_v3 Cicer arietinum L.
Ca_28016_v3 Cicer arietinum L.
Cc02_g19150 Coffea canephora
CDE04G0413 Ceratophyllum demersum
Cfa004566 Carpinus fangiana
Cfa004567 Carpinus fangiana
Ciclev10007044m.g Citrus clementina
Ciclev10029011m.g Citrus clementina
Ciclev10029027m.g Citrus clementina
CiPaw.05G010100 Carya illinoinensis
CiPaw.05G010200 Carya illinoinensis
CiPaw.05G010300 Carya illinoinensis
ClCG02G006240 Citrullus lanatus
COL.COLO4_16929 Corchorus olitorius
COL.COLO4_32607 Corchorus olitorius
Cpa.g.sc200.11 Carica papaya
Cpa.g.sc200.12 Carica papaya
CsaV3_7G008280 Cucumis sativus L.
CsaV3_7G008290 Cucumis sativus L.
CSS0005589 Camellia sinensis var. sinensis
CSS0029359 Camellia sinensis var. sinensis
DCAR_001639 Daucus carota
DCAR_008842 Daucus carota
DCAR_008843 Daucus carota
DCAR_021996 Daucus carota
DCAR_021997 Daucus carota
DCAR_029079 Daucus carota
DCAR_029080 Daucus carota
Dinv15753 Davidia involucrata
Dinv15754 Davidia involucrata
Duzib052G0320 Durio zibethinus
Duzib052G0980 Durio zibethinus
Duzib132G0742 Durio zibethinus
Duzib132G0876 Durio zibethinus
Duzib132G1209 Durio zibethinus
ECA240G0111 Erigeron canadensis
ECA240G2774 Erigeron canadensis
EL10Ac9g22301 Beta vulgaris
EL10Ac9g22302 Beta vulgaris
Eucgr.E02952 Eucalyptus grandis
Eucgr.E02953 Eucalyptus grandis
FAN15G2457 Fragaria x ananassa
FAN15G2920 Fragaria x ananassa
FAN15G3663 Fragaria x ananassa
FAN20G0449 Fragaria x ananassa
FAN20G2386 Fragaria x ananassa
FAN24G0198 Fragaria x ananassa
FAN24G2775 Fragaria x ananassa
FAN24G2839 Fragaria x ananassa
FvH4_2g05360 Fragaria vesca
FvH4_2g05380 Fragaria vesca
FvH4_2g05400 Fragaria vesca
Glyma.04G140300 Glycine max
Glyma.10G263300 Glycine max
Glyma.10G263400 Glycine max
Glyma.11G000800 Glycine max
Glyma.20G126800 Glycine max
Glyma.20G126900 Glycine max
Gohir.A01G007700 Gossypium hirsutum
Gohir.A07G160105 Gossypium hirsutum
Gohir.A12G022500 Gossypium hirsutum
Gohir.A13G043200 Gossypium hirsutum
Gohir.A13G045100 Gossypium hirsutum
Gohir.D01G007800 Gossypium hirsutum
Gohir.D01G007900 Gossypium hirsutum
Gohir.D12G022900 Gossypium hirsutum
Gohir.D13G041600 Gossypium hirsutum
Gohir.D13G041700 Gossypium hirsutum
Gorai.002G008900 Gossypium raimondii
Gorai.002G009000 Gossypium raimondii
Gorai.008G023400 Gossypium raimondii
Gorai.013G046500 Gossypium raimondii
Gorai.013G046600 Gossypium raimondii
GSVIVG01003170001 Vitis vinifera
GSVIVG01003172001 Vitis vinifera
HanXRQChr03g0081461 Helianthus annuus
HanXRQChr09g0250551 Helianthus annuus
HanXRQChr13g0412301 Helianthus annuus
HanXRQChr13g0412381 Helianthus annuus
Haze_10158 Corylus avellana
Haze_10184 Corylus avellana
HPP92_000204 Vanilla planifolia
HPP92_000224 Vanilla planifolia
Hund00142 Selenicereus undatus
Hund06329 Selenicereus undatus
Lalb_Chr06g0165501 Lupinus albus
Lalb_Chr21g0308411 Lupinus albus
Lj5A213G82 Lonicera japonica
Lj5A213G83 Lonicera japonica
Lj5C213T13 Lonicera japonica
Lj5C213T14 Lonicera japonica
Lj5g0004858 Lotus japonicus
Lj5g0005502 Lotus japonicus
Lsat_1_v5_gn_5_61901 Lactuca sativa
Lsat_1_v5_gn_5_61981 Lactuca sativa
Manes.07G067900 Manihot esculenta
Manes.07G068000 Manihot esculenta
Manes.07G068020 Manihot esculenta
Manes.07G068040 Manihot esculenta
Manes.07G068060 Manihot esculenta
Manes.07G070100 Manihot esculenta
Manes.07G070200 Manihot esculenta
Manes.10G077303 Manihot esculenta
Mapoly0035s0016 Marchantia polymorpha
MBI16_g33271_MAGBIO Magnolia biondii
MCO09G784 Micromonas commoda
MD00G1024900 Malus domestica
MD05G1087600 Malus domestica
Medtr1g107510 Medicago truncatula
Medtr1g107525 Medicago truncatula
MELO3C018478.2 Cucumis melo
MELO3C018479.2 Cucumis melo
Migut.B00378 Erythranthe guttata
MSTRG.16719 Avicennia marina
Nitab4.5_0002815g0120 Nicotiana tabacum
Nitab4.5_0005392g0100 Nicotiana tabacum
Nitab4.5_0011730g0010 Nicotiana tabacum
Nitab4.5_0019519g0010 Nicotiana tabacum
Nn3g18461 Nelumbo nucifera
Nn4g23376 Nelumbo nucifera
Nn5g30400 Nelumbo nucifera
Oeu013737.1 Olea europaea
Oeu013740.2 Olea europaea
Oeu017471.1 Olea europaea
Oeu017472.1 Olea europaea
Os02g0187100 Oryza sativa ssp. japonica
Os06g0638700 Oryza sativa ssp. japonica
Os08g0319900 Oryza sativa ssp. japonica
Os09g0110300 Oryza sativa ssp. japonica
Peaxi162Scf00003g02425 Petunia axillaris
Peaxi162Scf00003g02427 Petunia axillaris
Peaxi162Scf00016g02254 Petunia axillaris
PGR042G1326 Punica granatum
PGR042G1755 Punica granatum
PGR042G3901 Punica granatum
PGR142G0026 Punica granatum
PGR142G0973 Punica granatum
PGSC0003DMG400023115 Solanum tuberosum
PGSC0003DMG400023265 Solanum tuberosum
PGSC0003DMG401023116 Solanum tuberosum
PGSC0003DMG402023116 Solanum tuberosum
Phvul.007G038500 Phaseolus vulgaris
Phvul.007G038600 Phaseolus vulgaris
Potri.001G301501 Populus trichocarpa
Potri.001G301600 Populus trichocarpa
Potri.001G301700 Populus trichocarpa
Potri.009G097201 Populus trichocarpa
Potri.009G097300 Populus trichocarpa
Pp3c17_13910 Physcomitrium patens
PRCOL_00000273 Prasinoderma coloniale
Prupe.8G132800 Prunus persica
Prupe.8G132900 Prunus persica
Prupe.8G133000 Prunus persica
Prupe.8G133300 Prunus persica
Prupe.8G133400 Prunus persica
Psat6g219800 Pisum sativum
Psat6g219840 Pisum sativum
PSO017G0685 Papaver somniferum
PSO170G0382 Papaver somniferum
PSO170G2095 Papaver somniferum
PSO170G5561 Papaver somniferum
PSO210G5751 Papaver somniferum
PSO541G3404 Papaver somniferum
PSO675G6309 Papaver somniferum
QL11p034091 Quercus lobata
QL11p034099 Quercus lobata
QL11p034113 Quercus lobata
QL11p034124 Quercus lobata
QL11p034135 Quercus lobata
QL93p0189_0042 Quercus lobata
RcHm_v2.0_Chr6g0255621 Rosa chinensis
RcHm_v2.0_Chr6g0255631 Rosa chinensis
RcHm_v2.0_Chr6g0255661 Rosa chinensis
RcHm_v2.0_Chr6g0255671 Rosa chinensis
RcHm_v2.0_Chr6g0255681 Rosa chinensis
RcHm_v2.0_Chr6g0255711 Rosa chinensis
RcHm_v2.0_Chr6g0272191 Rosa chinensis
Rhsim11G0160800 Rhododendron simsii
Sabra09G0074800 Salix brachista
Sabra16G0189600 Salix brachista
SalBow6G2417 Salvia bowleyana
SalBow6G3559 Salvia bowleyana
SalBow6G4512 Salvia bowleyana
Sc08g0001490 Simmondsia chinensis
Sc08g0001500 Simmondsia chinensis
Sc08g0001510 Simmondsia chinensis
Sc08g0001520 Simmondsia chinensis
Sc08g0001530 Simmondsia chinensis
Sed0016071 Sechium edule
Sed0021372 Sechium edule
Sed0024993 Sechium edule
SEGI_20666 Sequoiadendron giganteum
SEGI_40227 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13044 Striga asiatica
SMO203G0246 Selaginella moellendorffii
SMO351G0380 Selaginella moellendorffii
Solyc01g107700.4 Solanum lycopersicum
Solyc10g049910.2 Solanum lycopersicum
Solyc10g049913.1 Solanum lycopersicum
Solyc10g049930.1 Solanum lycopersicum
Solyc10g049970.2 Solanum lycopersicum
Sopen01g049880 Solanum pennellii
Sopen10g019960 Solanum pennellii
Sopen10g019980 Solanum pennellii
Sopen10g020100 Solanum pennellii
Sp3g28620 Schrenkiella parvula
Sp7g31940 Schrenkiella parvula
Sp7g31950 Schrenkiella parvula
Sp7g32990 Schrenkiella parvula
TAR376G0083 Trochodendron aralioides
TAR376G1158 Trochodendron aralioides
TAR629G2234 Trochodendron aralioides
THA.LOC104807248 Tarenaya hassleriana
THA.LOC104807249 Tarenaya hassleriana
THA.LOC104807250 Tarenaya hassleriana
THA.LOC104819561 Tarenaya hassleriana
THA.LOC104819562 Tarenaya hassleriana
Thecc.02G106300 Theobroma cacao
Thecc.02G106400 Theobroma cacao
Thecc.02G106500 Theobroma cacao
Thhalv10025961m.g Eutrema salsugineum
Thhalv10026013m.g Eutrema salsugineum
TPR.G13866 Trifolium pratense
TPR.G13877 Trifolium pratense
TWI75G0770 Tripterygium wilfordii
TWI79G0816 Tripterygium wilfordii
unitig_0.g842 Utricularia gibba
unitig_0.g868 Utricularia gibba
vmacro02009 Vaccinium macrocarpon
VMungo0720G1956 Vigna mungo
VMungo0720G2683 Vigna mungo
Zm00001eb206470 Zea mays
Zm00001eb221740 Zea mays
Zm00001eb234600 Zea mays
Zm00001eb307270 Zea mays

User provided reference genes

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