Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18130 Brassica napus
A03p20390 Brassica napus
A06p13390 Brassica napus
A07p30130 Brassica napus
A07p38810 Brassica napus
Aa31LG4G3020 Aethionema arabicum
Aa31LG5G22280 Aethionema arabicum
Aa31LG7G2240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.303 Anthoceros agrestis
Actinidia37362 Actinidia chinensis
Actinidia37363 Actinidia chinensis
Actinidia37364 Actinidia chinensis
Actinidia39083 Actinidia chinensis
Ah.08g211750 Amaranthus hybridus
Ah.08g216740 Amaranthus hybridus
Ah.12g060560 Amaranthus hybridus
AL1G29750 Arabidopsis lyrata
AL2G32330 Arabidopsis lyrata
Aqoxy1G01186 Aquilegia oxysepala
Aqoxy7G01083 Aquilegia oxysepala
Aqoxy7G01087 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BR9EX8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HCBU45 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ILX5DK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LSZ6GE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5L34I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SH6UJL Arachis hypogaea
AT1G17460 Arabidopsis thaliana
AT1G72650 Arabidopsis thaliana
AT2G37025 Arabidopsis thaliana
ATR0598G183 Amborella trichopoda
ATR0680G183 Amborella trichopoda
Atru.chr1.3913_Atru.chr1.3914 Acer truncatum
Atru.chr8.1841 Acer truncatum
AUR62001491 Chenopodium quinoa
AUR62009879 Chenopodium quinoa
AUR62019496 Chenopodium quinoa
AUR62040462 Chenopodium quinoa
AUR62042538 Chenopodium quinoa
BcaB01g03800 Brassica carinata
BcaB03g15681 Brassica carinata
BcaB05g24768 Brassica carinata
BcaB05g24769 Brassica carinata
BcaC01g05626 Brassica carinata
BcaC08g45698 Brassica carinata
BcaC08g46708 Brassica carinata
BolC3t14789H Brassica oleracea
BolC5t30291H Brassica oleracea
BolC6t38584H Brassica oleracea
BraA03t11283Z Brassica rapa
BraA06t24491Z Brassica rapa
BraA07t30651Z Brassica rapa
BraA07t31435Z Brassica rapa
C03p23980 Brassica napus
C05p15870 Brassica napus
C06p34820 Brassica napus
C06p46970 Brassica napus
CAN.G1039.1 Capsicum annuum
CAN.G622.6 Capsicum annuum
CAN.G631.53 Capsicum annuum
CAN.G862.28 Capsicum annuum
CANSAT54G1055 Cannabis sativa
CANSAT56G1008 Cannabis sativa
CANSAT80G0518 Cannabis sativa
CARHR018060 Cardamine hirsuta
CARHR065570 Cardamine hirsuta
CARHR131510 Cardamine hirsuta
Carub.0001s1723 Capsella rubella
Carub.0002s1950 Capsella rubella
Carub.0004s1889 Capsella rubella
Ca_05006_v3 Cicer arietinum L.
Ca_11487_v3 Cicer arietinum L.
CBR_g24127 Chara braunii
Cc00_g25540 Coffea canephora
Cc06_g04060 Coffea canephora
CDE05G0207 Ceratophyllum demersum
CDE06G2062 Ceratophyllum demersum
CDE07G0096 Ceratophyllum demersum
CDE11G0007 Ceratophyllum demersum
CDE11G1002 Ceratophyllum demersum
Cfa003540 Carpinus fangiana
Ciclev10011603m.g Citrus clementina
Ciclev10025094m.g Citrus clementina
CiPaw.01G219900 Carya illinoinensis
CiPaw.02G136600 Carya illinoinensis
CiPaw.09G174000 Carya illinoinensis
CiPaw.10G132600 Carya illinoinensis
CiPaw.13G117200 Carya illinoinensis
ClCG03G002860 Citrullus lanatus
ClCG04G009190 Citrullus lanatus
COL.COLO4_30770 Corchorus olitorius
Cpa.g.sc25.106 Carica papaya
Cpa.g.sc25.107 Carica papaya
Cpa.g.sc25.108 Carica papaya
Cpa.g.sc92.112 Carica papaya
CsaV3_1G013770 Cucumis sativus L.
CsaV3_6G039760 Cucumis sativus L.
CSS0004700 Camellia sinensis var. sinensis
CSS0024498 Camellia sinensis var. sinensis
CSS0025294 Camellia sinensis var. sinensis
CSS0044849 Camellia sinensis var. sinensis
CSS0046262 Camellia sinensis var. sinensis
DCAR_007643 Daucus carota
DCAR_014990 Daucus carota
Dinv04034 Davidia involucrata
Dinv37300 Davidia involucrata
Duzib093G1485 Durio zibethinus
Duzib106G1082 Durio zibethinus
Duzib128G0606 Durio zibethinus
Duzib160G0193 Durio zibethinus
Duzib192G0904 Durio zibethinus
Duzib235G0320 Durio zibethinus
Duzib235G0587 Durio zibethinus
ECA234G1457 Erigeron canadensis
EL10Ac7g16404 Beta vulgaris
EL10Ac7g16566 Beta vulgaris
Eucgr.J00905 Eucalyptus grandis
Eucgr.J02823 Eucalyptus grandis
Eucgr.K01251 Eucalyptus grandis
FAN02G0106 Fragaria x ananassa
FAN02G0658 Fragaria x ananassa
FAN05G1508 Fragaria x ananassa
FAN05G3447 Fragaria x ananassa
FAN09G1436 Fragaria x ananassa
FAN14G1967 Fragaria x ananassa
FAN14G3233 Fragaria x ananassa
FAN14G3235 Fragaria x ananassa
FAN14G4975 Fragaria x ananassa
FvH4_6g16130 Fragaria vesca
FvH4_6g34560 Fragaria vesca
Glyma.07G037100 Glycine max
Glyma.10G057800 Glycine max
Glyma.13G144600 Glycine max
Glyma.16G006500 Glycine max
Gohir.A01G214600 Gossypium hirsutum
Gohir.A10G053000 Gossypium hirsutum
Gohir.A11G324300 Gossypium hirsutum
Gohir.D01G203100 Gossypium hirsutum
Gohir.D10G054800 Gossypium hirsutum
Gohir.D11G343400 Gossypium hirsutum
Gorai.002G247800 Gossypium raimondii
Gorai.007G373500 Gossypium raimondii
Gorai.011G058300 Gossypium raimondii
GSVIVG01016777001 Vitis vinifera
GSVIVG01025226001 Vitis vinifera
GSVIVG01025710001 Vitis vinifera
HanXRQChr01g0027511 Helianthus annuus
HanXRQChr10g0312061 Helianthus annuus
HanXRQChr11g0350271 Helianthus annuus
Haze_16020 Corylus avellana
Haze_16021 Corylus avellana
Haze_20572 Corylus avellana
Hma1.2p1_0291F.1_g115170 Hydrangea macrophylla
Hma1.2p1_0496F.1_g166190 Hydrangea macrophylla
Hma1.2p1_0714F.1_g207920 Hydrangea macrophylla
HPP92_026223 Vanilla planifolia
Hund05742 Selenicereus undatus
Lalb_Chr04g0263411 Lupinus albus
Lalb_Chr21g0314941 Lupinus albus
Lj2P1018T20 Lonicera japonica
Lj3A983T64 Lonicera japonica
Lj3g0019571 Lotus japonicus
Lj5A38T41 Lonicera japonica
Lj5g0008179 Lotus japonicus
Lsat_1_v5_gn_1_53040 Lactuca sativa
Lsat_1_v5_gn_5_135921 Lactuca sativa
Lsat_1_v5_gn_6_45261 Lactuca sativa
Manes.04G143700 Manihot esculenta
Manes.08G008900 Manihot esculenta
Manes.09G064100 Manihot esculenta
Manes.11G021500 Manihot esculenta
Manes.11G148600 Manihot esculenta
Mapoly0008s0016 Marchantia polymorpha
MBI13_g11364_MAGBIO Magnolia biondii
MBI18_g39090_MAGBIO Magnolia biondii
MBI18_g39091_MAGBIO Magnolia biondii
MBI19_g11854_MAGBIO Magnolia biondii
MCO01G535 Micromonas commoda
MCO06G225 Micromonas commoda
MCO09G209 Micromonas commoda
MD04G1095600 Malus domestica
MD04G1095700 Malus domestica
MD09G1184800 Malus domestica
MD12G1115600 Malus domestica
MD17G1168700 Malus domestica
Medtr1g063940 Medicago truncatula
Medtr8g020330 Medicago truncatula
MELO3C004928.2 Cucumis melo
MELO3C014217.2 Cucumis melo
MELO3C024360.2 Cucumis melo
Migut.D00942 Erythranthe guttata
Migut.J00525 Erythranthe guttata
Migut.L01689 Erythranthe guttata
MSTRG.19166 Avicennia marina
MSTRG.26699 Avicennia marina
MSTRG.4788 Avicennia marina
Nitab4.5_0000101g0340 Nicotiana tabacum
Nitab4.5_0002072g0040 Nicotiana tabacum
Nitab4.5_0002461g0020 Nicotiana tabacum
Nitab4.5_0002963g0080 Nicotiana tabacum
Nitab4.5_0004479g0040 Nicotiana tabacum
Nitab4.5_0012253g0010 Nicotiana tabacum
Nn2g11536 Nelumbo nucifera
Nn2g13745 Nelumbo nucifera
Nn8g38715 Nelumbo nucifera
Oeu005331.1 Olea europaea
Oeu007565.1 Olea europaea
Oeu016974.2 Olea europaea
Oeu058722.2 Olea europaea
Os02g0776700 Oryza sativa ssp. japonica
Os10g0443800 Oryza sativa ssp. japonica
Os10g0444100 Oryza sativa ssp. japonica
Peaxi162Scf00038g01824 Petunia axillaris
Peaxi162Scf00115g01228 Petunia axillaris
Peaxi162Scf00123g01118 Petunia axillaris
PGR102G2864 Punica granatum
PGR119G2274 Punica granatum
PGR142G3844 Punica granatum
PGSC0003DMG400002481 Solanum tuberosum
PGSC0003DMG400008048 Solanum tuberosum
Phvul.007G150100 Phaseolus vulgaris
Phvul.010G131400 Phaseolus vulgaris
Potri.001G170200 Populus trichocarpa
Potri.003G063700 Populus trichocarpa
Potri.006G126300 Populus trichocarpa
Pp3c1_19660 Physcomitrium patens
Pp3c2_20860 Physcomitrium patens
PRCOL_00000540 Prasinoderma coloniale
PRCOL_00000744 Prasinoderma coloniale
PRCOL_00002972 Prasinoderma coloniale
Prupe.3G042900 Prunus persica
Prupe.6G106200 Prunus persica
Prupe.6G234700 Prunus persica
Psat4g183000 Pisum sativum
Psat6g072000 Pisum sativum
Psat7g151640 Pisum sativum
Psat7g151680 Pisum sativum
Psat7g153640 Pisum sativum
PSO063G5513 Papaver somniferum
PSO339G1048 Papaver somniferum
PSO421G0226 Papaver somniferum
PSO421G0732 Papaver somniferum
PSO801G0697 Papaver somniferum
QL01p021039 Quercus lobata
QL05p008151 Quercus lobata
QL07p044034 Quercus lobata
RcHm_v2.0_Chr2g0145091 Rosa chinensis
RcHm_v2.0_Chr3g0469971 Rosa chinensis
Rhsim01G0214800 Rhododendron simsii
Rhsim12G0209300 Rhododendron simsii
Sabra01G0141100 Salix brachista
Sabra01G0141200 Salix brachista
Sabra03G0037200 Salix brachista
Sabra03G0037300 Salix brachista
Sabra06G0099600 Salix brachista
Sabra16G0096800 Salix brachista
SalBow5G4639 Salvia bowleyana
SalBow5G4755 Salvia bowleyana
SalBow7G3112 Salvia bowleyana
Sc10g0007860 Simmondsia chinensis
Sc20g0005280 Simmondsia chinensis
Sed0013927 Sechium edule
Sed0015777 Sechium edule
Sed0020845 Sechium edule
SEGI_01955 Sequoiadendron giganteum
SEGI_30968 Sequoiadendron giganteum
SEGI_32999 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15534 Striga asiatica
SGA_v2.0_scaffold68G22883 Striga asiatica
SGA_v2.0_scaffold75G24853 Striga asiatica
SMO347G0432 Selaginella moellendorffii
SMO351G0570 Selaginella moellendorffii
Solyc03g121990.4 Solanum lycopersicum
Solyc09g007990.3 Solanum lycopersicum
Solyc11g069850.3 Solanum lycopersicum
Sopen03g040810 Solanum pennellii
Sopen09g002790 Solanum pennellii
Sopen11g028430 Solanum pennellii
Sp1g15600 Schrenkiella parvula
Sp4g19310 Schrenkiella parvula
Sp5g27710 Schrenkiella parvula
TAR623G1051 Trochodendron aralioides
TAR624G0441 Trochodendron aralioides
TAR626G1279 Trochodendron aralioides
THA.LOC104808052 Tarenaya hassleriana
Thecc.05G063300 Theobroma cacao
Thecc.06G118700 Theobroma cacao
Thhalv10007199m.g Eutrema salsugineum
Thhalv10016738m.g Eutrema salsugineum
Thhalv10018282m.g Eutrema salsugineum
TPR.G29236 Trifolium pratense
TPR.G32506 Trifolium pratense
TPR.G35218 Trifolium pratense
TWI53G2014 Tripterygium wilfordii
TWI74G0209 Tripterygium wilfordii
TWI75G1747 Tripterygium wilfordii
TWI79G0498 Tripterygium wilfordii
unitig_744.g24679 Utricularia gibba
vmacro14416 Vaccinium macrocarpon
vmacro17055 Vaccinium macrocarpon
VMungo0331G1548 Vigna mungo
VMungo0720G0621 Vigna mungo
Zm00001eb222520 Zea mays
Zm00001eb256690 Zea mays

User provided reference genes

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