Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14900 Brassica napus
A09p14250 Brassica napus
A09p14830 Brassica napus
A09p69100 Brassica napus
A09p69110 Brassica napus
Aa31LG1G10810 Aethionema arabicum
Aa31LG1G10920 Aethionema arabicum
Aa31LG2G1290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1551 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4842 Anthoceros agrestis
Actinidia10107 Actinidia chinensis
Actinidia20201 Actinidia chinensis
Actinidia22713 Actinidia chinensis
Ah.05g179870 Amaranthus hybridus
AL1G10990 Arabidopsis lyrata
AL2G10640 Arabidopsis lyrata
AL7G47610 Arabidopsis lyrata
Aqoxy7G00156 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18YCU1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.49VJRR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7RH2JF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9D2QVV Arachis hypogaea
AT1G01450 Arabidopsis thaliana
AT1G64300 Arabidopsis thaliana
AT5G41730 Arabidopsis thaliana
ATR1093G036 Amborella trichopoda
Atru.chr5.624 Acer truncatum
Atru.chr9.2053 Acer truncatum
Atru.chr9.2054 Acer truncatum
Atru.chr9.2055 Acer truncatum
AUR62004455 Chenopodium quinoa
AUR62012236 Chenopodium quinoa
AUR62022868 Chenopodium quinoa
AUR62023495 Chenopodium quinoa
BcaB06g27657 Brassica carinata
BcaB06g27660 Brassica carinata
BcaB07g31450 Brassica carinata
BcaB07g31513 Brassica carinata
BcaC04g22553 Brassica carinata
BcaC04g22633 Brassica carinata
BcaC07g42359 Brassica carinata
BolC4t26477H Brassica oleracea
BolC4t26479H Brassica oleracea
BolC8t52881H Brassica oleracea
BolC9t54614H Brassica oleracea
BolC9t54692H Brassica oleracea
BraA04t17128Z Brassica rapa
BraA09t37074Z Brassica rapa
BraA09t37129Z Brassica rapa
BraA09t42247Z Brassica rapa
C04p48960 Brassica napus
C08p53670 Brassica napus
C09p17160 Brassica napus
C09p17950 Brassica napus
CAN.G532.92 Capsicum annuum
CAN.G792.66 Capsicum annuum
CAN.G986.40 Capsicum annuum
CANSAT21G1111 Cannabis sativa
CARHR000980 Cardamine hirsuta
CARHR000990 Cardamine hirsuta
CARHR046660 Cardamine hirsuta
CARHR272940 Cardamine hirsuta
Carub.0001s0081 Capsella rubella
Carub.0002s0051 Capsella rubella
Carub.0007s3373 Capsella rubella
Ca_24523_v3 Cicer arietinum L.
Ca_26627_v3 Cicer arietinum L.
Cc02_g38990 Coffea canephora
Cc08_g15730 Coffea canephora
CDE02G3525 Ceratophyllum demersum
CDE04G3413 Ceratophyllum demersum
CDE08G0387 Ceratophyllum demersum
Cfa012847 Carpinus fangiana
Ciclev10018862m.g Citrus clementina
Ciclev10023409m.g Citrus clementina
CiPaw.02G038800 Carya illinoinensis
CiPaw.11G124300 Carya illinoinensis
ClCG01G002040 Citrullus lanatus
ClCG05G001110 Citrullus lanatus
COL.COLO4_06325 Corchorus olitorius
COL.COLO4_21725 Corchorus olitorius
Cpa.g.sc122.29 Carica papaya
Cpa.g.sc194.6 Carica papaya
CsaV3_3G008440 Cucumis sativus L.
CsaV3_5G002170 Cucumis sativus L.
CSS0000921 Camellia sinensis var. sinensis
CSS0003489 Camellia sinensis var. sinensis
CSS0028421 Camellia sinensis var. sinensis
CSS0031059 Camellia sinensis var. sinensis
CSS0049258 Camellia sinensis var. sinensis
DCAR_005375 Daucus carota
DCAR_008539 Daucus carota
Dinv32558 Davidia involucrata
Dinv38863 Davidia involucrata
Dinv38864 Davidia involucrata
Duzib133G1398 Durio zibethinus
Duzib205G0985 Durio zibethinus
EL10Ac1g00311 Beta vulgaris
EL10Ac2g04815 Beta vulgaris
Eucgr.D01773 Eucalyptus grandis
Eucgr.D02347 Eucalyptus grandis
FAN01G2041 Fragaria x ananassa
FAN03G1212 Fragaria x ananassa
FAN04G0079 Fragaria x ananassa
FAN06G1068 Fragaria x ananassa
FAN06G4181 Fragaria x ananassa
FAN08G2474 Fragaria x ananassa
FAN10G0945 Fragaria x ananassa
FAN10G3036 Fragaria x ananassa
FAN13G2888 Fragaria x ananassa
FAN18G2516 Fragaria x ananassa
FvH4_5g03980 Fragaria vesca
FvH4_7g15980 Fragaria vesca
Glyma.11G018800 Glycine max
Glyma.16G027300 Glycine max
Gohir.A08G099742 Gossypium hirsutum
Gohir.A09G190900 Gossypium hirsutum
Gohir.A11G095000 Gossypium hirsutum
Gohir.D08G132600 Gossypium hirsutum
Gohir.D09G185450 Gossypium hirsutum
Gohir.D11G100000 Gossypium hirsutum
Gorai.004G135500 Gossypium raimondii
Gorai.006G208100 Gossypium raimondii
Gorai.007G106200 Gossypium raimondii
GSVIVG01019491001 Vitis vinifera
GSVIVG01027053001 Vitis vinifera
Haze_08674 Corylus avellana
Haze_15624 Corylus avellana
Hma1.2p1_0952F.1_g240880 Hydrangea macrophylla
Hma1.2p1_2900F.1_g330030 Hydrangea macrophylla
HPP92_008644 Vanilla planifolia
HPP92_008767 Vanilla planifolia
HPP92_008768 Vanilla planifolia
HPP92_009161 Vanilla planifolia
Hund13848 Selenicereus undatus
Hund15947 Selenicereus undatus
Lalb_Chr04g0254541 Lupinus albus
Lalb_Chr05g0211631 Lupinus albus
Lalb_Chr09g0320701 Lupinus albus
Lalb_Chr17g0342331 Lupinus albus
Lj2A171T61 Lonicera japonica
Lj3g0027964 Lotus japonicus
Lj9A592T70 Lonicera japonica
LjContig00312_ERROPOS870357g0014000 Lotus japonicus
Manes.01G048000 Manihot esculenta
Manes.01G248800 Manihot esculenta
MBI07_g20447_MAGBIO Magnolia biondii
MD01G1076300 Malus domestica
MD06G1101300 Malus domestica
MD07G1145200 Malus domestica
MD14G1121000 Malus domestica
Medtr5g009600 Medicago truncatula
Medtr8g027990 Medicago truncatula
MELO3C005737.2 Cucumis melo
MELO3C006064.2 Cucumis melo
Migut.A00684 Erythranthe guttata
Migut.B01837 Erythranthe guttata
Migut.E01620 Erythranthe guttata
Migut.G01223 Erythranthe guttata
Migut.I00420 Erythranthe guttata
Migut.J00942 Erythranthe guttata
MSTRG.17321 Avicennia marina
MSTRG.25656 Avicennia marina
Nitab4.5_0000223g0110 Nicotiana tabacum
Nitab4.5_0000305g0080 Nicotiana tabacum
Nitab4.5_0002944g0190 Nicotiana tabacum
Nitab4.5_0004161g0110 Nicotiana tabacum
Nitab4.5_0006656g0020 Nicotiana tabacum
Nitab4.5_0013597g0020 Nicotiana tabacum
Nn1g01807 Nelumbo nucifera
Oeu004931.1 Olea europaea
Oeu004932.1 Olea europaea
Oeu008681.1 Olea europaea
Oeu008682.1 Olea europaea
Oeu008683.1 Olea europaea
Oeu017336.1 Olea europaea
Oeu046821.1 Olea europaea
Os01g0621600 Oryza sativa ssp. japonica
Os05g0585800 Oryza sativa ssp. japonica
Peaxi162Scf00074g01220 Petunia axillaris
Peaxi162Scf00102g01734 Petunia axillaris
Peaxi162Scf00668g00443 Petunia axillaris
Peaxi162Scf01012g00021 Petunia axillaris
PGR031G0781 Punica granatum
PGR031G1338 Punica granatum
PGSC0003DMG400000093 Solanum tuberosum
PGSC0003DMG400005785 Solanum tuberosum
PGSC0003DMG400012304 Solanum tuberosum
Phvul.002G162700 Phaseolus vulgaris
Phvul.010G111000 Phaseolus vulgaris
Potri.003G137000 Populus trichocarpa
Potri.014G095200 Populus trichocarpa
Pp3c10_150 Physcomitrium patens
Pp3c10_15760 Physcomitrium patens
Pp3c10_15840 Physcomitrium patens
Pp3c10_20260 Physcomitrium patens
Pp3c10_2950 Physcomitrium patens
Pp3c11_24020 Physcomitrium patens
Pp3c11_6700 Physcomitrium patens
Pp3c12_21860 Physcomitrium patens
Pp3c13_1180 Physcomitrium patens
Pp3c13_1240 Physcomitrium patens
Pp3c13_16480 Physcomitrium patens
Pp3c13_1691 Physcomitrium patens
Pp3c14_18150 Physcomitrium patens
Pp3c14_400 Physcomitrium patens
Pp3c14_6772 Physcomitrium patens
Pp3c14_6980 Physcomitrium patens
Pp3c15_20810 Physcomitrium patens
Pp3c16_21480 Physcomitrium patens
Pp3c17_8610 Physcomitrium patens
Pp3c17_8770 Physcomitrium patens
Pp3c17_9980 Physcomitrium patens
Pp3c18_10980 Physcomitrium patens
Pp3c18_12630 Physcomitrium patens
Pp3c18_9170 Physcomitrium patens
Pp3c18_9180 Physcomitrium patens
Pp3c19_11710 Physcomitrium patens
Pp3c19_16570 Physcomitrium patens
Pp3c1_30900 Physcomitrium patens
Pp3c20_23610 Physcomitrium patens
Pp3c21_11870 Physcomitrium patens
Pp3c21_1520 Physcomitrium patens
Pp3c21_60 Physcomitrium patens
Pp3c22_19220 Physcomitrium patens
Pp3c22_19230 Physcomitrium patens
Pp3c22_19310 Physcomitrium patens
Pp3c23_18010 Physcomitrium patens
Pp3c24_20760 Physcomitrium patens
Pp3c25_13600 Physcomitrium patens
Pp3c2_1030 Physcomitrium patens
Pp3c2_1120 Physcomitrium patens
Pp3c2_180 Physcomitrium patens
Pp3c2_181 Physcomitrium patens
Pp3c2_2170 Physcomitrium patens
Pp3c3_7040 Physcomitrium patens
Pp3c4_11670 Physcomitrium patens
Pp3c5_15380 Physcomitrium patens
Prupe.2G183700 Prunus persica
Prupe.5G114700 Prunus persica
Psat2g185040 Pisum sativum
Psat4g159680 Pisum sativum
PSO104G0252 Papaver somniferum
PSO135G0723 Papaver somniferum
PSO421G0300 Papaver somniferum
QL02p031499 Quercus lobata
QL04p059212 Quercus lobata
RcHm_v2.0_Chr1g0358861 Rosa chinensis
RcHm_v2.0_Chr6g0280721 Rosa chinensis
RcHm_v2.0_Chr7g0195511 Rosa chinensis
Rhsim07G0006500 Rhododendron simsii
Rhsim07G0084400 Rhododendron simsii
Sabra03G0098500 Salix brachista
Sabra14G0069700 Salix brachista
SalBow3G3306 Salvia bowleyana
Sc23g0002260 Simmondsia chinensis
Sc23g0002270 Simmondsia chinensis
Sc23g0002340 Simmondsia chinensis
Sed0024021 Sechium edule
Sed0026553 Sechium edule
SEGI_01971 Sequoiadendron giganteum
SEGI_12494 Sequoiadendron giganteum
SEGI_18818 Sequoiadendron giganteum
SEGI_18922 Sequoiadendron giganteum
SEGI_22132 Sequoiadendron giganteum
SEGI_29443 Sequoiadendron giganteum
SEGI_31442 Sequoiadendron giganteum
SGA_v2.0_scaffold173G39094 Striga asiatica
SGA_v2.0_scaffold173G39096 Striga asiatica
SHI07025 Sapria himalayana
SMO231G0025 Selaginella moellendorffii
SMO231G0041 Selaginella moellendorffii
SMO351G0416 Selaginella moellendorffii
SMO351G0622 Selaginella moellendorffii
SMO351G0658 Selaginella moellendorffii
Solyc01g095550.2 Solanum lycopersicum
Solyc08g008240.3 Solanum lycopersicum
Solyc08g081980.4 Solanum lycopersicum
Sopen01g039300 Solanum pennellii
Sopen08g004090 Solanum pennellii
Sopen08g030280 Solanum pennellii
Sp1g00870 Schrenkiella parvula
Sp2g00460 Schrenkiella parvula
Sp7g00360 Schrenkiella parvula
TAR629G1025 Trochodendron aralioides
TAR636G3426 Trochodendron aralioides
THA.LOC104801574 Tarenaya hassleriana
THA.LOC104817677 Tarenaya hassleriana
THA.LOC104823608 Tarenaya hassleriana
Thecc.01G347000 Theobroma cacao
Thecc.03G292600 Theobroma cacao
Thhalv10009834m.g Eutrema salsugineum
Thhalv10023305m.g Eutrema salsugineum
Thhalv10027660m.g Eutrema salsugineum
Thhalv10029146m.g Eutrema salsugineum
TPR.G1122 Trifolium pratense
TPR.G6718 Trifolium pratense
TWI59G1142 Tripterygium wilfordii
TWI81G0513 Tripterygium wilfordii
unitig_899.g14810 Utricularia gibba
unitig_899.g14811 Utricularia gibba
vmacro13190 Vaccinium macrocarpon
VMungo0331G1581 Vigna mungo
VMungo1215G3350 Vigna mungo
Zm00001eb344930 Zea mays
Zm00001eb358440 Zea mays

User provided reference genes

Program Settings