Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25380 Brassica napus
A01p28420 Brassica napus
A03p14570 Brassica napus
A03p67320 Brassica napus
A04p29700 Brassica napus
A06p08860 Brassica napus
A07p38710 Brassica napus
A09p18420 Brassica napus
A09p65260 Brassica napus
Aa31LG2G10840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1946 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4447 Anthoceros agrestis
Actinidia10259 Actinidia chinensis
Actinidia19262 Actinidia chinensis
Actinidia19602 Actinidia chinensis
Actinidia27592 Actinidia chinensis
Actinidia29647 Actinidia chinensis
Ah.00g000140 Amaranthus hybridus
Ah.11g039590 Amaranthus hybridus
AL1G20570 Arabidopsis lyrata
AL2G18370 Arabidopsis lyrata
AL4G26470 Arabidopsis lyrata
Aqoxy5G01945 Aquilegia oxysepala
Aqoxy6G02043 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7CPH5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BFXG33 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IW0ZP6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RP3X8Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SF9WRK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VYH6KR Arachis hypogaea
AT1G09940 Arabidopsis thaliana
AT1G58290 Arabidopsis thaliana
AT2G31250 Arabidopsis thaliana
ATR0315G026 Amborella trichopoda
ATR0315G098 Amborella trichopoda
ATR0697G177 Amborella trichopoda
Atru.chr13.936 Acer truncatum
AUR62035407 Chenopodium quinoa
AUR62035695 Chenopodium quinoa
BcaB04g20200 Brassica carinata
BcaB05g22902 Brassica carinata
BcaC04g22132 Brassica carinata
BcaC04g22133 Brassica carinata
BcaC05g24827 Brassica carinata
BcaC05g24828 Brassica carinata
BcaC05g24829 Brassica carinata
BcaC05g25154 Brassica carinata
BcaC07g41853 Brassica carinata
BcaC08g43209 Brassica carinata
BcaC09g49484 Brassica carinata
BcaC09g49840 Brassica carinata
BolC1t01014H Brassica oleracea
BolC1t03172H Brassica oleracea
BolC1t03562H Brassica oleracea
BolC5t29794H Brassica oleracea
BolC8t52456H Brassica oleracea
BolC9t55218H Brassica oleracea
BraA01t02484Z Brassica rapa
BraA01t02739Z Brassica rapa
BraA01t03055Z Brassica rapa
BraA06t24081Z Brassica rapa
BraA09t37471Z Brassica rapa
BraA09t41871Z Brassica rapa
C01p31760 Brassica napus
C01p31770 Brassica napus
C01p31780 Brassica napus
C01p31790 Brassica napus
C01p36060 Brassica napus
C01p38880 Brassica napus
C05p10490 Brassica napus
C08p49210 Brassica napus
C09p22990 Brassica napus
CAN.G1099.10 Capsicum annuum
CAN.G1585.1 Capsicum annuum
CAN.G17.25 Capsicum annuum
CAN.G181.62 Capsicum annuum
CAN.G2133.3 Capsicum annuum
CAN.G433.14 Capsicum annuum
CAN.G504.56 Capsicum annuum
CAN.G723.29 Capsicum annuum
CAN.G756.44 Capsicum annuum
CAN.G756.47 Capsicum annuum
CAN.G756.51 Capsicum annuum
CAN.G756.54 Capsicum annuum
CAN.G825.15 Capsicum annuum
CANSAT54G2846 Cannabis sativa
CARHR010020 Cardamine hirsuta
CARHR010060 Cardamine hirsuta
CARHR053630 Cardamine hirsuta
CARHR180080 Cardamine hirsuta
Carub.0001s0934 Capsella rubella
Carub.0002s0626 Capsella rubella
Carub.0004s1121 Capsella rubella
Ca_15547_v3 Cicer arietinum L.
Ca_18417_v3 Cicer arietinum L.
Ca_18432_v3 Cicer arietinum L.
Ca_20566_v3 Cicer arietinum L.
CBR_g22372 Chara braunii
Cc02_g20500 Coffea canephora
Cc10_g08170 Coffea canephora
CDE02G1455 Ceratophyllum demersum
CDE04G1218 Ceratophyllum demersum
CDE04G3057 Ceratophyllum demersum
CDE06G0251 Ceratophyllum demersum
CDE06G1714 Ceratophyllum demersum
Cfa004773 Carpinus fangiana
Cfa010030 Carpinus fangiana
Cfa013838 Carpinus fangiana
Ciclev10000765m.g Citrus clementina
CiPaw.05G025800 Carya illinoinensis
CiPaw.07G160900 Carya illinoinensis
CiPaw.08G058300 Carya illinoinensis
ClCG08G011910 Citrullus lanatus
ClCG09G016390 Citrullus lanatus
COL.COLO4_35335 Corchorus olitorius
Cpa.g.c33192 Carica papaya
Cre07.g342150 Chlamydomonas reinhardtii
CsaV3_2G030530 Cucumis sativus L.
CsaV3_7G007370 Cucumis sativus L.
CSS0011743 Camellia sinensis var. sinensis
CSS0017541 Camellia sinensis var. sinensis
CSS0039476 Camellia sinensis var. sinensis
CSS0039540 Camellia sinensis var. sinensis
CSS0041947 Camellia sinensis var. sinensis
DCAR_009549 Daucus carota
DCAR_020032 Daucus carota
DCAR_029184 Daucus carota
Dinv16039 Davidia involucrata
Dinv22018 Davidia involucrata
Dinv44891 Davidia involucrata
Duzib041G0513 Durio zibethinus
Duzib093G1467 Durio zibethinus
ECA232G4595 Erigeron canadensis
ECA240G1492 Erigeron canadensis
ECA246G0247 Erigeron canadensis
Eucgr.F00461 Eucalyptus grandis
Eucgr.F02174 Eucalyptus grandis
FAN04G1066 Fragaria x ananassa
FAN08G1219 Fragaria x ananassa
FAN15G3750 Fragaria x ananassa
FAN18G3525 Fragaria x ananassa
FAN20G2489 Fragaria x ananassa
FAN24G0948 Fragaria x ananassa
FvH4_2g11020 Fragaria vesca
FvH4_5g33760 Fragaria vesca
Glyma.02G218300 Glycine max
Glyma.04G089800 Glycine max
Glyma.06G091600 Glycine max
Glyma.07G184700 Glycine max
Glyma.08G064700 Glycine max
Glyma.14G185700 Glycine max
Gohir.A01G125400 Gossypium hirsutum
Gohir.A05G215700 Gossypium hirsutum
Gohir.D01G113000 Gossypium hirsutum
Gohir.D05G218800 Gossypium hirsutum
Gorai.002G137800 Gossypium raimondii
Gorai.009G225900 Gossypium raimondii
GSVIVG01009241001 Vitis vinifera
GSVIVG01038541001 Vitis vinifera
HanXRQChr05g0136871 Helianthus annuus
HanXRQChr05g0150421 Helianthus annuus
HanXRQChr10g0277651 Helianthus annuus
Haze_10370 Corylus avellana
Haze_22510 Corylus avellana
Hma1.2p1_1548F.1_g290050 Hydrangea macrophylla
Hma1.2p1_2001F.1_g310690 Hydrangea macrophylla
HPP92_006559 Vanilla planifolia
HPP92_011357 Vanilla planifolia
Hund05210 Selenicereus undatus
Hund05233 Selenicereus undatus
Lalb_Chr04g0252671 Lupinus albus
Lalb_Chr09g0327011 Lupinus albus
Lalb_Chr23g0269851 Lupinus albus
Lj1g0006823 Lotus japonicus
Lj4A82G23 Lonicera japonica
Lj4g0001977 Lotus japonicus
Lj6A590G9 Lonicera japonica
Lj6A604G51 Lonicera japonica
Lj6C514G2 Lonicera japonica
Lj9A341T44 Lonicera japonica
LjContig00408g0022730 Lotus japonicus
Lsat_1_v5_gn_5_110760 Lactuca sativa
Lsat_1_v5_gn_6_106760 Lactuca sativa
Lsat_1_v5_gn_9_114080 Lactuca sativa
Manes.05G187000 Manihot esculenta
Manes.10G092000 Manihot esculenta
Manes.18G054750 Manihot esculenta
Mapoly0036s0075 Marchantia polymorpha
MBI16_g17840_MAGBIO Magnolia biondii
MBI16_g26719_MAGBIO Magnolia biondii
MBI16_g26720_MAGBIO Magnolia biondii
MBI16_g26721_MAGBIO Magnolia biondii
MBI16_g26722_MAGBIO Magnolia biondii
MBI16_g36425_MAGBIO Magnolia biondii
MBI16_g39579_MAGBIO Magnolia biondii
MCO02G453 Micromonas commoda
MD07G1086900 Malus domestica
MD08G1039900 Malus domestica
MD08G1207100 Malus domestica
MD10G1058000 Malus domestica
MD15G1391500 Malus domestica
Medtr3g111190 Medicago truncatula
Medtr4g092820 Medicago truncatula
Medtr5g067410 Medicago truncatula
MELO3C011113.2 Cucumis melo
MELO3C018565.2 Cucumis melo
Migut.B00512 Erythranthe guttata
Migut.N02831 Erythranthe guttata
Migut.O00439 Erythranthe guttata
MSTRG.20248 Avicennia marina
MSTRG.22187 Avicennia marina
Nitab4.5_0000377g0190 Nicotiana tabacum
Nitab4.5_0009020g0010 Nicotiana tabacum
Nitab4.5_0009708g0010 Nicotiana tabacum
Nitab4.5_0010352g0010 Nicotiana tabacum
Nn5g29753 Nelumbo nucifera
Oeu008416.1 Olea europaea
Oeu008551.1 Olea europaea
Oeu010504.1 Olea europaea
Oeu030743.1 Olea europaea
Oeu033611.1 Olea europaea
Oeu035796.1 Olea europaea
Oeu035797.1 Olea europaea
Os10g0502400 Oryza sativa ssp. japonica
Peaxi162Scf00299g00234 Petunia axillaris
Peaxi162Scf00626g00719 Petunia axillaris
PGR009G0004 Punica granatum
PGSC0003DMG400003105 Solanum tuberosum
PGSC0003DMG400006381 Solanum tuberosum
PGSC0003DMG400031163 Solanum tuberosum
Phvul.002G216100 Phaseolus vulgaris
Phvul.008G185100 Phaseolus vulgaris
Phvul.009G146100 Phaseolus vulgaris
Potri.001G286400 Populus trichocarpa
Potri.002G107800 Populus trichocarpa
Potri.009G080600 Populus trichocarpa
Pp3c10_16860 Physcomitrium patens
Pp3c26_6470 Physcomitrium patens
Pp3c4_19350 Physcomitrium patens
PRCOL_00005431 Prasinoderma coloniale
Prupe.1G541100 Prunus persica
Prupe.8G076800 Prunus persica
Psat2g065320 Pisum sativum
Psat5g017840 Pisum sativum
Psat7g104000 Pisum sativum
PSO210G1658 Papaver somniferum
PSO339G5827 Papaver somniferum
PSO761G0424 Papaver somniferum
QL11p027564 Quercus lobata
QL12p040165 Quercus lobata
RcHm_v2.0_Chr6g0269231 Rosa chinensis
RcHm_v2.0_Chr7g0233071 Rosa chinensis
Rhsim06G0068800 Rhododendron simsii
Rhsim07G0214800 Rhododendron simsii
Sabra02G0084700 Salix brachista
Sabra09G0062400 Salix brachista
Sabra16G0178900 Salix brachista
SalBow2G1892 Salvia bowleyana
SalBow6G2691 Salvia bowleyana
Sc15g0005160 Simmondsia chinensis
Sed0003125 Sechium edule
Sed0012926 Sechium edule
Sed0023858 Sechium edule
Sed0027976 Sechium edule
SEGI_33988 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11872 Striga asiatica
SGA_v2.0_scaffold32G12957 Striga asiatica
SHI08785 Sapria himalayana
SMO004G0030 Selaginella moellendorffii
SMO116G0082 Selaginella moellendorffii
SMO361G0350 Selaginella moellendorffii
Solyc01g089840.2 Solanum lycopersicum
Solyc01g106390.3 Solanum lycopersicum
Solyc04g076870.4 Solanum lycopersicum
Sopen01g035680 Solanum pennellii
Sopen01g048760 Solanum pennellii
Sopen04g030630 Solanum pennellii
Sp1g08600 Schrenkiella parvula
Sp2g05310 Schrenkiella parvula
TAR376G0757 Trochodendron aralioides
TAR625G1175 Trochodendron aralioides
TAR628G0338 Trochodendron aralioides
THA.LOC104816785 Tarenaya hassleriana
THA.LOC104820135 Tarenaya hassleriana
THA.LOC104823688 Tarenaya hassleriana
Thecc.08G077800 Theobroma cacao
Thhalv10007359m.g Eutrema salsugineum
Thhalv10023403m.g Eutrema salsugineum
TPR.G16913 Trifolium pratense
TPR.G27034 Trifolium pratense
TWI12G0875 Tripterygium wilfordii
TWI56G0002 Tripterygium wilfordii
unitig_0.g628 Utricularia gibba
unitig_578.g16153 Utricularia gibba
unitig_60.g25466 Utricularia gibba
unitig_60.g25467 Utricularia gibba
unitig_8.g4867 Utricularia gibba
vmacro04620 Vaccinium macrocarpon
vmacro19590 Vaccinium macrocarpon
vmacro21370 Vaccinium macrocarpon
VMungo0251G3031 Vigna mungo
VMungo0647G1910 Vigna mungo
VMungo1309G2564 Vigna mungo
Zm00001eb044210 Zea mays
Zm00001eb220800 Zea mays
Zm00001eb431800 Zea mays

User provided reference genes

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