Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p16680 Brassica napus
A05p41810 Brassica napus
A09p29890 Brassica napus
A09p64710 Brassica napus
A10p20700 Brassica napus
Aa31LG11G10750 Aethionema arabicum
Aa31LG5G16740 Aethionema arabicum
Aa31LG9G3090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1650 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4847 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4857 Anthoceros agrestis
Actinidia00080 Actinidia chinensis
Actinidia23465 Actinidia chinensis
Ah.07g204080 Amaranthus hybridus
Ah.13g074340 Amaranthus hybridus
AL3G17070 Arabidopsis lyrata
AL6G30330 Arabidopsis lyrata
AL7G42010 Arabidopsis lyrata
AL7G42020 Arabidopsis lyrata
Aqoxy5G00542 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2LK8AA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.50I9RC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7NQ1D2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A86KKQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QNE0FJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TAI81A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea
AT3G06210 Arabidopsis thaliana
AT4G14280 Arabidopsis thaliana
AT5G18980 Arabidopsis thaliana
ATR0626G280 Amborella trichopoda
AUR62002623 Chenopodium quinoa
AUR62030039 Chenopodium quinoa
BcaB07g33057 Brassica carinata
BcaB08g36630 Brassica carinata
BcaC02g10510 Brassica carinata
BcaC02g10511 Brassica carinata
BcaC02g11969 Brassica carinata
BcaC04g18634 Brassica carinata
BcaC04g21849 Brassica carinata
BcaC05g29794 Brassica carinata
BcaC05g30048 Brassica carinata
BcaC08g44283 Brassica carinata
BolC2t10917H Brassica oleracea
BolC4t22548H Brassica oleracea
BolC4t23204H Brassica oleracea
BolC4t23205H Brassica oleracea
BolC4t24353H Brassica oleracea
BolC5t34763H Brassica oleracea
BolC6t36900H Brassica oleracea
BolC9t58619H Brassica oleracea
BraA05t20572Z Brassica rapa
BraA05t22900Z Brassica rapa
BraA09t38549Z Brassica rapa
BraA10t44133Z Brassica rapa
C04p28080 Brassica napus
C05p61060 Brassica napus
C06p17010 Brassica napus
C06p51130 Brassica napus
C09p26670 Brassica napus
C09p26680 Brassica napus
C09p57520 Brassica napus
CAN.G522.5 Capsicum annuum
CANSAT78G2479 Cannabis sativa
CARHR194020 Cardamine hirsuta
CARHR220440 Cardamine hirsuta
CARHR220450 Cardamine hirsuta
Carub.0003s0565 Capsella rubella
Carub.0006s1728 Capsella rubella
Carub.0007s2803 Capsella rubella
Ca_00611_v3 Cicer arietinum L.
Ca_21578_v3 Cicer arietinum L.
Cc03_g02970 Coffea canephora
Cc03_g11960 Coffea canephora
CDE11G1151 Ceratophyllum demersum
Cfa015561 Carpinus fangiana
Ciclev10004326m.g Citrus clementina
CiPaw.01G158200 Carya illinoinensis
CiPaw.02G090600 Carya illinoinensis
ClCG05G005510 Citrullus lanatus
COL.COLO4_21625 Corchorus olitorius
Cpa.g.sc16.47 Carica papaya
Cpa.g.sc16.48 Carica papaya
CsaV3_3G013830 Cucumis sativus L.
DCAR_027143 Daucus carota
Dinv32356 Davidia involucrata
Dinv38368 Davidia involucrata
Dinv40703 Davidia involucrata
Duzib151G0934 Durio zibethinus
Duzib212G0330 Durio zibethinus
ECA236G3749 Erigeron canadensis
ECA240G1007 Erigeron canadensis
EL10Ac3g06316 Beta vulgaris
EL10Ac3g06330 Beta vulgaris
EL10Ac3g06331 Beta vulgaris
Eucgr.B01159 Eucalyptus grandis
Eucgr.H03615 Eucalyptus grandis
Eucgr.H03616 Eucalyptus grandis
Eucgr.H03618 Eucalyptus grandis
Eucgr.H03619 Eucalyptus grandis
Eucgr.H03622 Eucalyptus grandis
Eucgr.H03623 Eucalyptus grandis
Eucgr.H03624 Eucalyptus grandis
Eucgr.H03625 Eucalyptus grandis
Eucgr.H03628 Eucalyptus grandis
Eucgr.H03629 Eucalyptus grandis
Eucgr.H03630 Eucalyptus grandis
FAN07G2724 Fragaria x ananassa
FAN12G0231 Fragaria x ananassa
FAN17G1060 Fragaria x ananassa
FAN22G0299 Fragaria x ananassa
FvH4_4g14210 Fragaria vesca
Glyma.07G255300 Glycine max
Glyma.13G210500 Glycine max
Glyma.15G102300 Glycine max
Glyma.17G019000 Glycine max
Gohir.A10G115600 Gossypium hirsutum
Gohir.D10G150900 Gossypium hirsutum
Gorai.011G168100 Gossypium raimondii
GSVIVG01017870001 Vitis vinifera
HanXRQChr03g0071481 Helianthus annuus
HanXRQChr16g0510721 Helianthus annuus
Haze_00981 Corylus avellana
Haze_00987 Corylus avellana
Hma1.2p1_3925F.1_g337970 Hydrangea macrophylla
HPP92_001022 Vanilla planifolia
HPP92_011327 Vanilla planifolia
Lalb_Chr13g0304041 Lupinus albus
Lalb_Chr18g0055991 Lupinus albus
Lalb_Chr20g0118341 Lupinus albus
Lj3A804G34 Lonicera japonica
Lj6A664T60 Lonicera japonica
Lj6g0002777 Lotus japonicus
Lsat_1_v5_gn_7_62401 Lactuca sativa
Lsat_1_v5_gn_8_109980 Lactuca sativa
Manes.15G021700 Manihot esculenta
Mapoly0016s0150 Marchantia polymorpha
Mapoly0023s0141 Marchantia polymorpha
Mapoly0051s0011 Marchantia polymorpha
Mapoly0141s0026 Marchantia polymorpha
MBI19_g26728_MAGBIO Magnolia biondii
MBI19_g26729_MAGBIO Magnolia biondii
MBI19_g44201_MAGBIO Magnolia biondii
MBI19_g44202_MAGBIO Magnolia biondii
MD12G1098000 Malus domestica
MD12G1098100 Malus domestica
MD12G1098200 Malus domestica
MD12G1098300 Malus domestica
MD13G1180800 Malus domestica
MD16G1181500 Malus domestica
Medtr2g021310 Medicago truncatula
Medtr4g117500 Medicago truncatula
Medtr4g117510 Medicago truncatula
Medtr4g117520 Medicago truncatula
Medtr4g117540 Medicago truncatula
MELO3C006576.2 Cucumis melo
Migut.G00255 Erythranthe guttata
Nitab4.5_0000732g0170 Nicotiana tabacum
Nitab4.5_0006569g0010 Nicotiana tabacum
Nn1g02135 Nelumbo nucifera
Nn1g03327 Nelumbo nucifera
Nn3g17240 Nelumbo nucifera
Nn4g22748 Nelumbo nucifera
Nn4g26158 Nelumbo nucifera
Nn4g26159 Nelumbo nucifera
Nn8g39867 Nelumbo nucifera
Oeu023655.1 Olea europaea
Oeu037673.1 Olea europaea
Oeu046492.1 Olea europaea
Os01g0522100 Oryza sativa ssp. japonica
Os01g0522400 Oryza sativa ssp. japonica
Os01g0522800 Oryza sativa ssp. japonica
Os01g0522950 Oryza sativa ssp. japonica
Os01g0524100 Oryza sativa ssp. japonica
Os01g0618300 Oryza sativa ssp. japonica
Os03g0362200 Oryza sativa ssp. japonica
Os03g0363100 Oryza sativa ssp. japonica
Os05g0141000 Oryza sativa ssp. japonica
Os05g0141050 Oryza sativa ssp. japonica
Os05g0141200 Oryza sativa ssp. japonica
Os05g0239400 Oryza sativa ssp. japonica
Os07g0543500 Oryza sativa ssp. japonica
Os07g0648000 Oryza sativa ssp. japonica
Os07g0648233 Oryza sativa ssp. japonica
Os07g0648400 Oryza sativa ssp. japonica
Os07g0648900 Oryza sativa ssp. japonica
Os07g0649100 Oryza sativa ssp. japonica
Os07g0649300 Oryza sativa ssp. japonica
Os07g0649500 Oryza sativa ssp. japonica
Os07g0649800 Oryza sativa ssp. japonica
Os07g0650100 Oryza sativa ssp. japonica
Os07g0650200 Oryza sativa ssp. japonica
Os07g0650375 Oryza sativa ssp. japonica
Os07g0650600 Oryza sativa ssp. japonica
Os07g0651600 Oryza sativa ssp. japonica
Os07g0651800 Oryza sativa ssp. japonica
Os07g0653000 Oryza sativa ssp. japonica
Os07g0653050 Oryza sativa ssp. japonica
Os07g0653900 Oryza sativa ssp. japonica
Os07g0654450 Oryza sativa ssp. japonica
Os07g0654700 Oryza sativa ssp. japonica
Os07g0654900 Oryza sativa ssp. japonica
Os07g0655201 Oryza sativa ssp. japonica
Os10g0506900 Oryza sativa ssp. japonica
Os11g0503400 Oryza sativa ssp. japonica
Os12g0261300 Oryza sativa ssp. japonica
Os12g0284700 Oryza sativa ssp. japonica
Os12g0285100 Oryza sativa ssp. japonica
Os12g0528100 Oryza sativa ssp. japonica
Os12g0548800 Oryza sativa ssp. japonica
Os12g0549800 Oryza sativa ssp. japonica
Os12g0551200 Oryza sativa ssp. japonica
Peaxi162Scf00095g00088 Petunia axillaris
PGR031G1046 Punica granatum
PGSC0003DMG400004356 Solanum tuberosum
Phvul.003G096100 Phaseolus vulgaris
Phvul.006G155500 Phaseolus vulgaris
Potri.008G200500 Populus trichocarpa
Potri.010G029300 Populus trichocarpa
Prupe.1G148900 Prunus persica
Psat1g184800 Pisum sativum
PSO210G0199 Papaver somniferum
PSO832G4062 Papaver somniferum
QL06p005869 Quercus lobata
RcHm_v2.0_Chr4g0418921 Rosa chinensis
RcHm_v2.0_Chr4g0418961 Rosa chinensis
RcHm_v2.0_Chr4g0418981 Rosa chinensis
Rhsim02G0018300 Rhododendron simsii
Rhsim02G0018500 Rhododendron simsii
Rhsim02G0018600 Rhododendron simsii
Rhsim02G0018700 Rhododendron simsii
Rhsim02G0018800 Rhododendron simsii
Rhsim04G0209500 Rhododendron simsii
Sabra08G0160700 Salix brachista
Sabra10G0011800 Salix brachista
SalBow2G1768 Salvia bowleyana
Sc19g0004640 Simmondsia chinensis
Sed0009038 Sechium edule
SEGI_00627 Sequoiadendron giganteum
SEGI_15543 Sequoiadendron giganteum
SEGI_16830 Sequoiadendron giganteum
SEGI_20196 Sequoiadendron giganteum
SEGI_24489 Sequoiadendron giganteum
SEGI_27106 Sequoiadendron giganteum
SEGI_37943 Sequoiadendron giganteum
SEGI_40287 Sequoiadendron giganteum
SGA_v2.0_scaffold142G35621 Striga asiatica
SHI00358 Sapria himalayana
SHI12389 Sapria himalayana
SHI12391 Sapria himalayana
SMO147G0137 Selaginella moellendorffii
SMO147G0154 Selaginella moellendorffii
SMO147G0348 Selaginella moellendorffii
SMO147G0366 Selaginella moellendorffii
SMO198G0021 Selaginella moellendorffii
SMO330G0018 Selaginella moellendorffii
SMO330G0029 Selaginella moellendorffii
SMO330G0032 Selaginella moellendorffii
SMO330G0042 Selaginella moellendorffii
SMO330G0044 Selaginella moellendorffii
SMO330G0057 Selaginella moellendorffii
SMO330G0058 Selaginella moellendorffii
SMO364G0943 Selaginella moellendorffii
Solyc01g080260.3 Solanum lycopersicum
Sopen01g032050 Solanum pennellii
Sp6g25410 Schrenkiella parvula
Sp7g12290 Schrenkiella parvula
TAR362G0170 Trochodendron aralioides
TAR362G0409 Trochodendron aralioides
TAR633G0675 Trochodendron aralioides
TAR633G2030 Trochodendron aralioides
TAR633G2664 Trochodendron aralioides
THA.LOC104808657 Tarenaya hassleriana
THA.LOC104822317 Tarenaya hassleriana
Thecc.04G219400 Theobroma cacao
Thhalv10012681m.g Eutrema salsugineum
Thhalv10020063m.g Eutrema salsugineum
Thhalv10027455m.g Eutrema salsugineum
TPR.G11033 Trifolium pratense
TPR.G20122 Trifolium pratense
TWI73G0131 Tripterygium wilfordii
unitig_52.g17259 Utricularia gibba
unitig_736.g22497 Utricularia gibba
unitig_899.g14402 Utricularia gibba
vmacro08252 Vaccinium macrocarpon
vmacro15295 Vaccinium macrocarpon
vmacro15296 Vaccinium macrocarpon
vmacro15297 Vaccinium macrocarpon
VMungo0540G1789 Vigna mungo
VMungo1215G1039 Vigna mungo
Zm00001eb003680 Zea mays
Zm00001eb017660 Zea mays
Zm00001eb017670 Zea mays
Zm00001eb029400 Zea mays
Zm00001eb032460 Zea mays
Zm00001eb032620 Zea mays
Zm00001eb059660 Zea mays
Zm00001eb059670 Zea mays
Zm00001eb059680 Zea mays
Zm00001eb059700 Zea mays
Zm00001eb089280 Zea mays
Zm00001eb089300 Zea mays
Zm00001eb089310 Zea mays
Zm00001eb137810 Zea mays
Zm00001eb298770 Zea mays
Zm00001eb360450 Zea mays

User provided reference genes

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