Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p29460 Brassica napus
A05p11650 Brassica napus
A08p25350 Brassica napus
Aa31LG6G11100 Aethionema arabicum
Aa31LG9G6970 Aethionema arabicum
Actinidia05674 Actinidia chinensis
Actinidia05675 Actinidia chinensis
Actinidia07628 Actinidia chinensis
Actinidia11563 Actinidia chinensis
Ah.09g237840 Amaranthus hybridus
AL1G42580 Arabidopsis lyrata
AL4G29740 Arabidopsis lyrata
AL8G12590 Arabidopsis lyrata
Aqoxy4G00489 Aquilegia oxysepala
Aqoxy4G00490 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0L68LL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3RY0PX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4CF6XM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.82WME4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C5WPFA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DWDV7D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NG333M Arachis hypogaea
AT1G28960 Arabidopsis thaliana
AT2G33980 Arabidopsis thaliana
AT5G45940 Arabidopsis thaliana
ATR0602G175 Amborella trichopoda
Atru.chr10.1730 Acer truncatum
Atru.chr10.1731 Acer truncatum
AUR62031137 Chenopodium quinoa
AUR62036541 Chenopodium quinoa
AUR62036542 Chenopodium quinoa
BcaB02g06951 Brassica carinata
BcaB02g10605 Brassica carinata
BcaC03g16801 Brassica carinata
BcaNung06435 Brassica carinata
BcaNung06753 Brassica carinata
BolC2t10725H Brassica oleracea
BolC3t19805H Brassica oleracea
BolC4t23086H Brassica oleracea
BraA02t07973Z Brassica rapa
BraA05t20112Z Brassica rapa
BraA08t34487Z Brassica rapa
C02p46730 Brassica napus
C03p75490 Brassica napus
C04p15120 Brassica napus
CAN.G168.4 Capsicum annuum
CAN.G168.5 Capsicum annuum
CAN.G168.6 Capsicum annuum
CAN.G168.7 Capsicum annuum
CANSAT21G1701 Cannabis sativa
CANSAT35G0814 Cannabis sativa
CANSAT35G1987 Cannabis sativa
CARHR028170 Cardamine hirsuta
CARHR128050 Cardamine hirsuta
CARHR176010 Cardamine hirsuta
Carub.0001s2717 Capsella rubella
Carub.0004s1562 Capsella rubella
Carub.0008s0198 Capsella rubella
Ca_00415_v3 Cicer arietinum L.
Ca_26046_v3 Cicer arietinum L.
Ca_29253_v3 Cicer arietinum L.
CBR_g40798 Chara braunii
Cc02_g14420 Coffea canephora
Cc02_g14430 Coffea canephora
CDE02G2750 Ceratophyllum demersum
CDE09G0646 Ceratophyllum demersum
Cfa000572 Carpinus fangiana
Cfa017158 Carpinus fangiana
Cfa017159 Carpinus fangiana
Cfa026578 Carpinus fangiana
Ciclev10013367m.g Citrus clementina
Ciclev10016225m.g Citrus clementina
Ciclev10016324m.g Citrus clementina
Ciclev10016428m.g Citrus clementina
CiPaw.09G067100 Carya illinoinensis
CiPaw.09G212900 Carya illinoinensis
CiPaw.10G056700 Carya illinoinensis
CiPaw.10G056800 Carya illinoinensis
ClCG01G023520 Citrullus lanatus
ClCG03G007870 Citrullus lanatus
COL.COLO4_14490 Corchorus olitorius
COL.COLO4_31350 Corchorus olitorius
COL.COLO4_31351 Corchorus olitorius
Cpa.g.sc7.17 Carica papaya
Cpa.g.sc7.18 Carica papaya
Cre02.g081300 Chlamydomonas reinhardtii
CsaV3_1G033470 Cucumis sativus L.
CsaV3_6G050650 Cucumis sativus L.
CsaV3_6G050660 Cucumis sativus L.
CSS0005037 Camellia sinensis var. sinensis
CSS0036133 Camellia sinensis var. sinensis
CSS0038688 Camellia sinensis var. sinensis
CSS0041682 Camellia sinensis var. sinensis
DCAR_004026 Daucus carota
DCAR_005238 Daucus carota
Dinv00807 Davidia involucrata
Dinv00808 Davidia involucrata
Dinv04638 Davidia involucrata
Dinv08448 Davidia involucrata
Dinv17391 Davidia involucrata
Dinv17392 Davidia involucrata
Dinv40647 Davidia involucrata
Duzib106G0027 Durio zibethinus
Duzib160G0452 Durio zibethinus
Duzib192G0681 Durio zibethinus
Duzib235G0757 Durio zibethinus
ECA233G5419 Erigeron canadensis
ECA234G4560 Erigeron canadensis
ECA248G2542 Erigeron canadensis
EL10Ac8g20484 Beta vulgaris
EL10Ac8g20485 Beta vulgaris
Eucgr.A00597 Eucalyptus grandis
Eucgr.D00552 Eucalyptus grandis
Eucgr.D00553 Eucalyptus grandis
Eucgr.E02668 Eucalyptus grandis
FAN02G1440 Fragaria x ananassa
FAN05G2364 Fragaria x ananassa
FAN09G1785 Fragaria x ananassa
FAN11G2208 Fragaria x ananassa
FAN14G3639 Fragaria x ananassa
FAN16G2656 Fragaria x ananassa
FAN21G1185 Fragaria x ananassa
FAN25G2148 Fragaria x ananassa
FAN25G2835 Fragaria x ananassa
FvH4_3g08140 Fragaria vesca
FvH4_6g11030 Fragaria vesca
Glyma.07G204200 Glycine max
Glyma.13G171900 Glycine max
Glyma.13G232567 Glycine max
Glyma.13G232633 Glycine max
Glyma.15G080067 Glycine max
Glyma.15G080133 Glycine max
Gohir.A06G130200 Gossypium hirsutum
Gohir.A06G200800 Gossypium hirsutum
Gohir.A06G200900 Gossypium hirsutum
Gohir.A10G030300 Gossypium hirsutum
Gohir.D06G134500 Gossypium hirsutum
Gohir.D06G208000 Gossypium hirsutum
Gohir.D06G208100 Gossypium hirsutum
Gohir.D07G236250 Gossypium hirsutum
Gohir.D10G031200 Gossypium hirsutum
Gorai.001G272300 Gossypium raimondii
Gorai.010G156400 Gossypium raimondii
Gorai.010G242500 Gossypium raimondii
Gorai.010G242600 Gossypium raimondii
Gorai.011G032800 Gossypium raimondii
GSVIVG01021168001 Vitis vinifera
GSVIVG01030327001 Vitis vinifera
HanXRQChr01g0004921 Helianthus annuus
HanXRQChr01g0004941 Helianthus annuus
HanXRQChr08g0213991 Helianthus annuus
HanXRQChr11g0327171 Helianthus annuus
HanXRQChr11g0342661 Helianthus annuus
HanXRQChr17g0556031 Helianthus annuus
Haze_06278 Corylus avellana
Haze_06279 Corylus avellana
Haze_06280 Corylus avellana
Haze_21045 Corylus avellana
Hma1.2p1_0155F.1_g068440 Hydrangea macrophylla
HPP92_021320 Vanilla planifolia
Hund21189 Selenicereus undatus
Hund23956 Selenicereus undatus
Lalb_Chr05g0218711 Lupinus albus
Lalb_Chr20g0120791 Lupinus albus
Lalb_Chr20g0121351 Lupinus albus
Lj1C1196T10 Lonicera japonica
Lj2A295T45 Lonicera japonica
Lj2A295T46 Lonicera japonica
Lj2C295G8 Lonicera japonica
Lj3A948G65 Lonicera japonica
Lj3P694T51 Lonicera japonica
Lj4g0025931 Lotus japonicus
Lj6g0006547 Lotus japonicus
Lj6g0013813 Lotus japonicus
Lsat_1_v5_gn_1_120740 Lactuca sativa
Lsat_1_v5_gn_3_54121 Lactuca sativa
Lsat_1_v5_gn_4_50501 Lactuca sativa
Lsat_1_v5_gn_4_50521 Lactuca sativa
Lsat_1_v5_gn_4_50601 Lactuca sativa
Manes.09G109100 Manihot esculenta
Manes.16G035400 Manihot esculenta
Manes.17G053000 Manihot esculenta
Mapoly0042s0071 Marchantia polymorpha
MBI03_g40817_MAGBIO Magnolia biondii
MBI06_g31397_MAGBIO Magnolia biondii
MBI07_g17042_MAGBIO Magnolia biondii
MCO16G264 Micromonas commoda
MD04G1162300 Malus domestica
MD05G1305000 Malus domestica
MD10G1284100 Malus domestica
MD10G1284300 Malus domestica
MD12G1174800 Malus domestica
Medtr2g015380 Medicago truncatula
Medtr4g087905 Medicago truncatula
MELO3C002637.2 Cucumis melo
MELO3C007234.2 Cucumis melo
Migut.H01456 Erythranthe guttata
Migut.J00124 Erythranthe guttata
Migut.M01069 Erythranthe guttata
Migut.M01070 Erythranthe guttata
MSTRG.14722 Avicennia marina
MSTRG.16138 Avicennia marina
MSTRG.5558 Avicennia marina
Nitab4.5_0002024g0010 Nicotiana tabacum
Nitab4.5_0004143g0040 Nicotiana tabacum
Nitab4.5_0005897g0030 Nicotiana tabacum
Nitab4.5_0005897g0040 Nicotiana tabacum
Nitab4.5_0006237g0010 Nicotiana tabacum
Nitab4.5_0010549g0010 Nicotiana tabacum
Nn1g04337 Nelumbo nucifera
Nn1g09013 Nelumbo nucifera
Nn1g09014 Nelumbo nucifera
Oeu045069.1 Olea europaea
Oeu048418.1 Olea europaea
Oeu062331.1 Olea europaea
Os05g0209400 Oryza sativa ssp. japonica
Os08g0375900 Oryza sativa ssp. japonica
Os08g0376200 Oryza sativa ssp. japonica
Peaxi162Scf00269g00059 Petunia axillaris
Peaxi162Scf00269g00512 Petunia axillaris
Peaxi162Scf01132g00349 Petunia axillaris
PGR004G0680 Punica granatum
PGR023G0001 Punica granatum
PGR031G1612 Punica granatum
PGR042G1158 Punica granatum
PGR046G0003 Punica granatum
PGSC0003DMG400006254 Solanum tuberosum
PGSC0003DMG401026622 Solanum tuberosum
PGSC0003DMG402026622 Solanum tuberosum
Phvul.003G057301 Phaseolus vulgaris
Phvul.006G178500 Phaseolus vulgaris
Phvul.006G178600 Phaseolus vulgaris
Potri.004G053100 Populus trichocarpa
Potri.004G053200 Populus trichocarpa
Potri.004G053300 Populus trichocarpa
Potri.011G063300 Populus trichocarpa
Potri.016G121500 Populus trichocarpa
Pp3c5_27020 Physcomitrium patens
PRCOL_00002963 Prasinoderma coloniale
PRCOL_00005511 Prasinoderma coloniale
Prupe.4G057200 Prunus persica
Prupe.4G057300 Prunus persica
Prupe.4G057400 Prunus persica
Prupe.6G282000 Prunus persica
Psat1g200240 Pisum sativum
Psat1g200280 Pisum sativum
Psat7g118720 Pisum sativum
PSO063G6320 Papaver somniferum
PSO782G5265 Papaver somniferum
QL07p034360 Quercus lobata
RcHm_v2.0_Chr1g0373431 Rosa chinensis
RcHm_v2.0_Chr2g0139421 Rosa chinensis
RcHm_v2.0_Chr2g0167991 Rosa chinensis
RcHm_v2.0_Chr2g0168001 Rosa chinensis
RcHm_v2.0_Chr3g0462341 Rosa chinensis
RcHm_v2.0_Chr5g0010041 Rosa chinensis
RcHm_v2.0_Chr5g0010051 Rosa chinensis
Rhsim05G0221800 Rhododendron simsii
Rhsim13G0185000 Rhododendron simsii
Rhsim13G0185100 Rhododendron simsii
Sabra04G0034500 Salix brachista
Sabra04G0034600 Salix brachista
Sabra04G0034700 Salix brachista
Sabra16G0117200 Salix brachista
SalBow4G1371 Salvia bowleyana
SalBow5G5735 Salvia bowleyana
SalBow7G0456 Salvia bowleyana
SalBow7G2447 Salvia bowleyana
Sc05g0007230 Simmondsia chinensis
Sc05g0007240 Simmondsia chinensis
Sed0010572 Sechium edule
Sed0016484 Sechium edule
SEGI_20668 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07663 Striga asiatica
SGA_v2.0_scaffold1G00003 Striga asiatica
SMO171G0041 Selaginella moellendorffii
SMO361G0764 Selaginella moellendorffii
Solyc10g008750.3 Solanum lycopersicum
Solyc10g008760.3 Solanum lycopersicum
Solyc10g008770.3 Solanum lycopersicum
Sopen10g004520 Solanum pennellii
Sopen10g004530 Solanum pennellii
Sopen10g004540 Solanum pennellii
Sp1g24920 Schrenkiella parvula
Sp4g16330 Schrenkiella parvula
Sp7g17280 Schrenkiella parvula
TAR626G1459 Trochodendron aralioides
TAR633G2064 Trochodendron aralioides
THA.LOC104806146 Tarenaya hassleriana
Thecc.05G010300 Theobroma cacao
Thecc.06G175900 Theobroma cacao
Thecc.06G176000 Theobroma cacao
Thhalv10001014m.g Eutrema salsugineum
Thhalv10008389m.g Eutrema salsugineum
Thhalv10016959m.g Eutrema salsugineum
TPR.G11666 Trifolium pratense
TPR.G16263 Trifolium pratense
TWI38G0257 Tripterygium wilfordii
TWI74G0457 Tripterygium wilfordii
unitig_22.g6594 Utricularia gibba
unitig_699.g19340 Utricularia gibba
vmacro03882 Vaccinium macrocarpon
vmacro03883 Vaccinium macrocarpon
vmacro20308 Vaccinium macrocarpon
VMungo0251G3328 Vigna mungo
VMungo0540G0626 Vigna mungo
VMungo0540G2053 Vigna mungo
Zm00001eb350700 Zea mays

User provided reference genes

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