Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08550 Brassica napus
A03p30280 Brassica napus
A03p56560 Brassica napus
A03p58950 Brassica napus
A08p19640 Brassica napus
A08p20830 Brassica napus
Aa31LG2G20990 Aethionema arabicum
Aa31LG3G580 Aethionema arabicum
Aa31LG8G16660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.198 Anthoceros agrestis
Actinidia01198 Actinidia chinensis
Actinidia29890 Actinidia chinensis
Actinidia39733 Actinidia chinensis
Actinidia39736 Actinidia chinensis
AL3G48560 Arabidopsis lyrata
AL7G22910 Arabidopsis lyrata
AL7G26760 Arabidopsis lyrata
Aqoxy7G01273 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.24HVDZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.47H9LD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SLS97V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SX2030 Arachis hypogaea
AT2G19680 Arabidopsis thaliana
AT4G26210 Arabidopsis thaliana
AT4G29480 Arabidopsis thaliana
ATR0789G008 Amborella trichopoda
Atru.chr1.3657 Acer truncatum
Atru.chr7.1540 Acer truncatum
AUR62010500 Chenopodium quinoa
AUR62017400 Chenopodium quinoa
BcaB03g12498 Brassica carinata
BcaB03g12609 Brassica carinata
BcaC01g01173 Brassica carinata
BcaC05g30001 Brassica carinata
BcaC07g38228 Brassica carinata
BcaC09g50683 Brassica carinata
BcaC09g51736 Brassica carinata
BcaNung00478 Brassica carinata
BcaNung02435 Brassica carinata
BolC1t00960H Brassica oleracea
BolC1t02137H Brassica oleracea
BolC3t21236H Brassica oleracea
BolC5t34866H Brassica oleracea
BolC7t45965H Brassica oleracea
BolC7t46169H Brassica oleracea
BolC8t48656H Brassica oleracea
BraA01t00804Z Brassica rapa
BraA03t14726Z Brassica rapa
BraA03t14955Z Brassica rapa
BraA05t19592Z Brassica rapa
BraA08t33922Z Brassica rapa
BraA08t34038Z Brassica rapa
C01p09980 Brassica napus
C01p22080 Brassica napus
C03p89260 Brassica napus
C07p54760 Brassica napus
C07p56930 Brassica napus
C08p09810 Brassica napus
CAN.G1241.11 Capsicum annuum
CAN.G52.4 Capsicum annuum
CANSAT25G2967 Cannabis sativa
CANSAT56G0400 Cannabis sativa
CARHR110130 Cardamine hirsuta
CARHR233760 Cardamine hirsuta
CARHR237310 Cardamine hirsuta
Carub.0003s3397 Capsella rubella
Carub.0007s1106 Capsella rubella
Carub.0007s1474 Capsella rubella
Ca_17392_v3 Cicer arietinum L.
CBR_g39189 Chara braunii
Cc06_g11040 Coffea canephora
CDE05G0516 Ceratophyllum demersum
CDE05G2703 Ceratophyllum demersum
Cfa003120 Carpinus fangiana
Cfa003603 Carpinus fangiana
Cfa017940 Carpinus fangiana
Ciclev10009918m.g Citrus clementina
Ciclev10009919m.g Citrus clementina
Ciclev10026972m.g Citrus clementina
CiPaw.01G226800 Carya illinoinensis
CiPaw.03G219100 Carya illinoinensis
CiPaw.15G041100 Carya illinoinensis
CiPaw.16G029800 Carya illinoinensis
ClCG03G015840 Citrullus lanatus
ClCG11G001840 Citrullus lanatus
COL.COLO4_18234 Corchorus olitorius
COL.COLO4_21034 Corchorus olitorius
COL.COLO4_30612 Corchorus olitorius
Cpa.g.sc131.39 Carica papaya
Cpa.g.sc922.2 Carica papaya
CsaV3_1G040150 Cucumis sativus L.
CsaV3_2G001570 Cucumis sativus L.
CsaV3_UNG052430 Cucumis sativus L.
CSS0001835 Camellia sinensis var. sinensis
CSS0005412 Camellia sinensis var. sinensis
CSS0028809 Camellia sinensis var. sinensis
CSS0036385 Camellia sinensis var. sinensis
DCAR_000793 Daucus carota
DCAR_004441 Daucus carota
DCAR_005435 Daucus carota
DCAR_011999 Daucus carota
DCAR_012000 Daucus carota
DCAR_028627 Daucus carota
Dinv23428 Davidia involucrata
Dinv42288 Davidia involucrata
Duzib150G1565 Durio zibethinus
Duzib168G0907 Durio zibethinus
Duzib168G1918 Durio zibethinus
Duzib187G0017 Durio zibethinus
Duzib187G0205 Durio zibethinus
Duzib235G0810 Durio zibethinus
ECA233G5330 Erigeron canadensis
EL10Ac2g04502 Beta vulgaris
Eucgr.C00920 Eucalyptus grandis
Eucgr.C03937 Eucalyptus grandis
Eucgr.F03106 Eucalyptus grandis
FAN02G0675 Fragaria x ananassa
FAN05G1970 Fragaria x ananassa
FAN09G2265 Fragaria x ananassa
FAN14G5535 Fragaria x ananassa
FAN19G0735 Fragaria x ananassa
FAN23G2802 Fragaria x ananassa
FAN26G1255 Fragaria x ananassa
FAN26G3243 Fragaria x ananassa
FAN28G0307 Fragaria x ananassa
FvH4_1g06940 Fragaria vesca
FvH4_6g33000 Fragaria vesca
Glyma.05G223100 Glycine max
Glyma.08G030200 Glycine max
Glyma.13G351900 Glycine max
Gohir.A02G116000 Gossypium hirsutum
Gohir.A05G028600 Gossypium hirsutum
Gohir.A05G043400 Gossypium hirsutum
Gohir.A06G070900 Gossypium hirsutum
Gohir.A07G009900 Gossypium hirsutum
Gohir.D03G057000 Gossypium hirsutum
Gohir.D05G030200 Gossypium hirsutum
Gohir.D05G045100 Gossypium hirsutum
Gohir.D06G069600 Gossypium hirsutum
Gohir.D07G010200 Gossypium hirsutum
Gorai.001G010600 Gossypium raimondii
Gorai.003G060100 Gossypium raimondii
Gorai.009G030400 Gossypium raimondii
Gorai.009G046200 Gossypium raimondii
Gorai.010G081200 Gossypium raimondii
GSVIVG01014564001 Vitis vinifera
GSVIVG01016886001 Vitis vinifera
GSVIVG01035352001 Vitis vinifera
HanXRQChr03g0060701 Helianthus annuus
HanXRQChr07g0189751 Helianthus annuus
HanXRQChr09g0238171 Helianthus annuus
HanXRQChr10g0319071 Helianthus annuus
HanXRQChr12g0355341 Helianthus annuus
Hma1.2p1_0450F.1_g155620 Hydrangea macrophylla
Hma1.2p1_1074F.1_g254290 Hydrangea macrophylla
HPP92_002400 Vanilla planifolia
HPP92_008451 Vanilla planifolia
HPP92_027499 Vanilla planifolia
Hund19469 Selenicereus undatus
Hund24868 Selenicereus undatus
Lalb_Chr05g0223551 Lupinus albus
Lalb_Chr09g0331791 Lupinus albus
Lalb_Chr09g0331801 Lupinus albus
Lalb_Chr16g0390951 Lupinus albus
Lalb_Chr22g0349771 Lupinus albus
Lalb_Chr22g0351711 Lupinus albus
Lalb_Chr24g0393901 Lupinus albus
Lalb_Chr24g0396261 Lupinus albus
Lalb_Chr24g0396271 Lupinus albus
Lj2g0025865 Lotus japonicus
Lj3g0023728 Lotus japonicus
Lj4A314T23 Lonicera japonica
Lj4g0011626 Lotus japonicus
Lj7A672T65 Lonicera japonica
Lj7C280G6 Lonicera japonica
Lj8C551T0 Lonicera japonica
Lju3103A0G37 Lonicera japonica
Lsat_1_v5_gn_5_146000 Lactuca sativa
Lsat_1_v5_gn_6_13201 Lactuca sativa
Lsat_1_v5_gn_7_37880 Lactuca sativa
Manes.03G030700 Manihot esculenta
Manes.11G028500 Manihot esculenta
Manes.16G078500 Manihot esculenta
Manes.16G104600 Manihot esculenta
Mapoly0078s0023 Marchantia polymorpha
MBI04_g37931_MAGBIO Magnolia biondii
MBI06_g35528_MAGBIO Magnolia biondii
MCO15G590 Micromonas commoda
MD02G1073700 Malus domestica
MD08G1044300 Malus domestica
MD09G1195500 Malus domestica
MD15G1203200 Malus domestica
Medtr2g100380 Medicago truncatula
Medtr5g062980 Medicago truncatula
Medtr8g101880 Medicago truncatula
Medtr8g101890 Medicago truncatula
MELO3C015443.2 Cucumis melo
Migut.D01582 Erythranthe guttata
Migut.J00442 Erythranthe guttata
MSTRG.13754 Avicennia marina
MSTRG.17771 Avicennia marina
MSTRG.26403 Avicennia marina
Nitab4.5_0000012g0280 Nicotiana tabacum
Nitab4.5_0000540g0180 Nicotiana tabacum
Nitab4.5_0001179g0090 Nicotiana tabacum
Nitab4.5_0001584g0020 Nicotiana tabacum
Nitab4.5_0003752g0010 Nicotiana tabacum
Nitab4.5_0005471g0030 Nicotiana tabacum
Nitab4.5_0005471g0060 Nicotiana tabacum
Nitab4.5_0019254g0010 Nicotiana tabacum
Nn8g38921 Nelumbo nucifera
Oeu000331.1 Olea europaea
Oeu018434.1 Olea europaea
Oeu021468.2 Olea europaea
Oeu029404.2 Olea europaea
Oeu048296.1 Olea europaea
Oeu052133.1 Olea europaea
Os01g0600000 Oryza sativa ssp. japonica
Os05g0533800 Oryza sativa ssp. japonica
Peaxi162Scf00136g00618 Petunia axillaris
Peaxi162Scf00498g00036 Petunia axillaris
Peaxi162Scf00522g00210 Petunia axillaris
PGR102G0810 Punica granatum
PGR102G2615 Punica granatum
PGR142G3014 Punica granatum
PGSC0003DMG400000285 Solanum tuberosum
PGSC0003DMG400002209 Solanum tuberosum
PGSC0003DMG400013725 Solanum tuberosum
Phvul.002G304700 Phaseolus vulgaris
Phvul.002G305100 Phaseolus vulgaris
Phvul.005G161100 Phaseolus vulgaris
Potri.006G231900 Populus trichocarpa
Potri.006G232000 Populus trichocarpa
Potri.018G055501 Populus trichocarpa
Potri.018G055700 Populus trichocarpa
Pp3c17_14360 Physcomitrium patens
Pp3c7_10 Physcomitrium patens
Prupe.1G414300 Prunus persica
Prupe.3G052200 Prunus persica
Prupe.7G214000 Prunus persica
Psat5g294200 Pisum sativum
Psat7g018960 Pisum sativum
Psat7g019000 Pisum sativum
PSO063G3241 Papaver somniferum
PSO210G0584 Papaver somniferum
PSO210G2725 Papaver somniferum
PSO832G2064 Papaver somniferum
QL02p001463 Quercus lobata
QL02p063328 Quercus lobata
RcHm_v2.0_Chr2g0092881 Rosa chinensis
RcHm_v2.0_Chr2g0142551 Rosa chinensis
Rhsim03G0234500 Rhododendron simsii
Rhsim05G0035000 Rhododendron simsii
Rhsim11G0045700 Rhododendron simsii
Sabra06G0179900 Salix brachista
Sabra06G0180000 Salix brachista
Sabra18G0049900 Salix brachista
SalBow6G2153 Salvia bowleyana
Sc06g0000900 Simmondsia chinensis
Sc08g0008300 Simmondsia chinensis
Sc09g0009700 Simmondsia chinensis
Sc23g0005550 Simmondsia chinensis
Sed0003848 Sechium edule
Sed0013423 Sechium edule
Sed0027876 Sechium edule
Sed0028128 Sechium edule
SEGI_17313 Sequoiadendron giganteum
SEGI_31204 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01275 Striga asiatica
SGA_v2.0_scaffold51G18764 Striga asiatica
SMO266G0028 Selaginella moellendorffii
Solyc07g026770.3 Solanum lycopersicum
Solyc08g065470.4 Solanum lycopersicum
Solyc12g008730.3 Solanum lycopersicum
Sopen07g016090 Solanum pennellii
Sopen08g019080 Solanum pennellii
Sopen12g003660 Solanum pennellii
Sp7g24210 Schrenkiella parvula
Sp7g27350 Schrenkiella parvula
TAR383G0125 Trochodendron aralioides
TAR626G1381 Trochodendron aralioides
TAR636G3041 Trochodendron aralioides
THA.LOC104803986 Tarenaya hassleriana
THA.LOC104811736 Tarenaya hassleriana
THA.LOC104814602 Tarenaya hassleriana
THA.LOC104817748 Tarenaya hassleriana
Thecc.06G108400 Theobroma cacao
Thecc.09G052000 Theobroma cacao
Thecc.09G093500 Theobroma cacao
Thhalv10002122m.g Eutrema salsugineum
Thhalv10026574m.g Eutrema salsugineum
Thhalv10026577m.g Eutrema salsugineum
TPR.G25448 Trifolium pratense
TPR.G25473 Trifolium pratense
TPR.G36096 Trifolium pratense
TWI32G0417 Tripterygium wilfordii
TWI34G1987 Tripterygium wilfordii
TWI38G0296 Tripterygium wilfordii
TWI63G0619 Tripterygium wilfordii
unitig_27.g24733 Utricularia gibba
vmacro00156 Vaccinium macrocarpon
vmacro06274 Vaccinium macrocarpon
vmacro10814 Vaccinium macrocarpon
VMungo0251G0879 Vigna mungo
VMungo0251G2058 Vigna mungo
Zm00001eb154630 Zea mays
Zm00001eb161310 Zea mays
Zm00001eb342460 Zea mays
Zm00001eb357670 Zea mays

User provided reference genes

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