Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30200 Brassica napus
A02p39040 Brassica napus
A03p34320 Brassica napus
A03p40240 Brassica napus
A05p32290 Brassica napus
A05p42200 Brassica napus
A06p36950 Brassica napus
A09p05720 Brassica napus
Aa31LG11G9930 Aethionema arabicum
Aa31LG5G16230 Aethionema arabicum
Aa31LG8G4440 Aethionema arabicum
Actinidia17737 Actinidia chinensis
Ah.06g190740 Amaranthus hybridus
Ah.10g026790 Amaranthus hybridus
Ah.10g026800 Amaranthus hybridus
AL1G54930 Arabidopsis lyrata
AL3G16610 Arabidopsis lyrata
AL3G30640 Arabidopsis lyrata
AL6G38560 Arabidopsis lyrata
Aqoxy2G02476 Aquilegia oxysepala
Aqoxy5G02840 Aquilegia oxysepala
AT1G48325 Arabidopsis thaliana
AT3G05858 Arabidopsis thaliana
AT5G26620 Arabidopsis thaliana
ATR0796G075 Amborella trichopoda
Atru.chr12.1534 Acer truncatum
Atru.chr12.1536 Acer truncatum
Atru.chr4.3185 Acer truncatum
AUR62000479 Chenopodium quinoa
AUR62002532 Chenopodium quinoa
AUR62006822 Chenopodium quinoa
AUR62023661 Chenopodium quinoa
BcaB04g18950 Brassica carinata
BcaB04g19240 Brassica carinata
BcaB04g19717 Brassica carinata
BcaB06g25836 Brassica carinata
BcaB07g29941 Brassica carinata
BcaC01g03752 Brassica carinata
BcaC01g04301 Brassica carinata
BcaC03g17834 Brassica carinata
BcaC04g23632 Brassica carinata
BcaC05g28774 Brassica carinata
BcaC05g29776 Brassica carinata
BcaC05g30083 Brassica carinata
BcaC09g47857 Brassica carinata
BcaNung03681 Brassica carinata
BcaNung03907 Brassica carinata
BcaNung06223 Brassica carinata
BolC1t05659H Brassica oleracea
BolC2t11925H Brassica oleracea
BolC3t16462H Brassica oleracea
BolC3t17173H Brassica oleracea
BolC5t33619H Brassica oleracea
BolC5t34800H Brassica oleracea
BolC7t44687H Brassica oleracea
BolC9t53551H Brassica oleracea
BraA01t04469Z Brassica rapa
BraA02t08873Z Brassica rapa
BraA03t12608Z Brassica rapa
BraA03t13177Z Brassica rapa
BraA05t22057Z Brassica rapa
BraA05t22939Z Brassica rapa
BraA06t26620Z Brassica rapa
BraA09t36213Z Brassica rapa
C02p58650 Brassica napus
C03p41790 Brassica napus
C03p48940 Brassica napus
C05p48810 Brassica napus
C05p61420 Brassica napus
C07p41550 Brassica napus
C09p06310 Brassica napus
CAN.G1248.15 Capsicum annuum
CARHR080310 Cardamine hirsuta
CARHR092880 Cardamine hirsuta
CARHR186860 Cardamine hirsuta
Carub.0003s0521 Capsella rubella
Carub.0003s1728 Capsella rubella
Carub.0006s2437 Capsella rubella
Ca_02322_v3 Cicer arietinum L.
Ca_21362_v3 Cicer arietinum L.
Ca_30364_v3 Cicer arietinum L.
Cc02_g35880 Coffea canephora
Cfa015751 Carpinus fangiana
Ciclev10006471m.g Citrus clementina
Ciclev10010714m.g Citrus clementina
Ciclev10013220m.g Citrus clementina
Ciclev10013222m.g Citrus clementina
Ciclev10013684m.g Citrus clementina
Ciclev10013801m.g Citrus clementina
CiPaw.01G127300 Carya illinoinensis
CiPaw.02G068700 Carya illinoinensis
ClCG00G002170 Citrullus lanatus
ClCG02G014640 Citrullus lanatus
ClCG03G017890 Citrullus lanatus
ClCG08G002280 Citrullus lanatus
ClCG08G002300 Citrullus lanatus
ClCG08G002310 Citrullus lanatus
ClCG08G002330 Citrullus lanatus
ClCG08G002340 Citrullus lanatus
ClCG08G002360 Citrullus lanatus
ClCG08G002370 Citrullus lanatus
COL.COLO4_05484 Corchorus olitorius
COL.COLO4_36933 Corchorus olitorius
Cpa.g.sc146.6 Carica papaya
Cpa.g.sc48.225 Carica papaya
CsaV3_1G038050 Cucumis sativus L.
CsaV3_3G015630 Cucumis sativus L.
CsaV3_6G002620 Cucumis sativus L.
CsaV3_6G002630 Cucumis sativus L.
CsaV3_6G002640 Cucumis sativus L.
CsaV3_6G002650 Cucumis sativus L.
CsaV3_6G002670 Cucumis sativus L.
CSS0004014 Camellia sinensis var. sinensis
CSS0027376 Camellia sinensis var. sinensis
CSS0028703 Camellia sinensis var. sinensis
CSS0044388 Camellia sinensis var. sinensis
DCAR_001884 Daucus carota
DCAR_001885 Daucus carota
DCAR_001886 Daucus carota
DCAR_001887 Daucus carota
DCAR_002291 Daucus carota
DCAR_002292 Daucus carota
DCAR_002558 Daucus carota
DCAR_023419 Daucus carota
DCAR_026927 Daucus carota
Dinv24516 Davidia involucrata
Dinv24517 Davidia involucrata
Dinv30951 Davidia involucrata
Dinv30952 Davidia involucrata
Duzib128G1662 Durio zibethinus
ECA236G1383 Erigeron canadensis
ECA236G2737 Erigeron canadensis
ECA240G0021 Erigeron canadensis
ECA240G0866 Erigeron canadensis
ECA240G1387 Erigeron canadensis
ECA240G3242 Erigeron canadensis
ECA240G3359 Erigeron canadensis
EL10Ac3g06229 Beta vulgaris
EL10Ac4g09564 Beta vulgaris
Eucgr.H01321 Eucalyptus grandis
Eucgr.H01322 Eucalyptus grandis
Eucgr.H01323 Eucalyptus grandis
Eucgr.H01324 Eucalyptus grandis
Eucgr.H01325 Eucalyptus grandis
Eucgr.H01326 Eucalyptus grandis
Eucgr.H01327 Eucalyptus grandis
Eucgr.H01328 Eucalyptus grandis
Eucgr.H01329 Eucalyptus grandis
Eucgr.H01330 Eucalyptus grandis
Eucgr.H01331 Eucalyptus grandis
Eucgr.H01332 Eucalyptus grandis
Eucgr.H01333 Eucalyptus grandis
Eucgr.H01334 Eucalyptus grandis
Eucgr.L03552 Eucalyptus grandis
Eucgr.L03553 Eucalyptus grandis
FAN02G1676 Fragaria x ananassa
FAN05G4164 Fragaria x ananassa
FAN07G0342 Fragaria x ananassa
FAN09G0584 Fragaria x ananassa
FAN12G3878 Fragaria x ananassa
FAN14G5435 Fragaria x ananassa
FAN17G1996 Fragaria x ananassa
FvH4_4g21750 Fragaria vesca
FvH4_6g08530 Fragaria vesca
Glyma.09G080700 Glycine max
Glyma.09G080800 Glycine max
Glyma.13G117400 Glycine max
Glyma.15G185400 Glycine max
Glyma.15G185600 Glycine max
Glyma.15G185700 Glycine max
Glyma.17G042500 Glycine max
Gohir.A02G059800 Gossypium hirsutum
Gohir.A09G242300 Gossypium hirsutum
Gohir.A13G113800 Gossypium hirsutum
Gohir.A13G177800 Gossypium hirsutum
Gohir.D02G065400 Gossypium hirsutum
Gohir.D09G243000 Gossypium hirsutum
Gohir.D13G116800 Gossypium hirsutum
Gohir.D13G184400 Gossypium hirsutum
Gorai.005G074100 Gossypium raimondii
Gorai.006G266800 Gossypium raimondii
Gorai.013G131300 Gossypium raimondii
Gorai.013G210100 Gossypium raimondii
GSVIVG01017704001 Vitis vinifera
GSVIVG01017705001 Vitis vinifera
GSVIVG01017706001 Vitis vinifera
GSVIVG01017707001 Vitis vinifera
Lalb_Chr07g0181571 Lupinus albus
Lalb_Chr08g0232971 Lupinus albus
Lalb_Chr11g0073691 Lupinus albus
Lalb_Chr11g0073701 Lupinus albus
Lalb_Chr11g0073711 Lupinus albus
Lalb_Chr11g0073721 Lupinus albus
Lalb_Chr11g0073741 Lupinus albus
Lalb_Chr12g0200511 Lupinus albus
Lalb_Chr13g0299051 Lupinus albus
Lj6g0008561 Lotus japonicus
Lsat_1_v5_gn_7_63540 Lactuca sativa
Lsat_1_v5_gn_7_63581 Lactuca sativa
Lsat_1_v5_gn_7_63620 Lactuca sativa
Lsat_1_v5_gn_7_63880 Lactuca sativa
Lsat_1_v5_gn_9_84961 Lactuca sativa
Lsat_1_v5_gn_9_85041 Lactuca sativa
Lsat_1_v5_gn_9_85080 Lactuca sativa
Manes.03G213400 Manihot esculenta
Manes.08G107400 Manihot esculenta
Manes.09G181400 Manihot esculenta
Manes.15G075800 Manihot esculenta
MBI18_g40080_MAGBIO Magnolia biondii
MBI19_g04832_MAGBIO Magnolia biondii
MD04G1186400 Malus domestica
MD13G1137300 Malus domestica
MD13G1137400 Malus domestica
MD16G1133300 Malus domestica
Medtr2g044960 Medicago truncatula
Medtr2g044970 Medicago truncatula
Medtr4g124220 Medicago truncatula
MELO3C004151.2 Cucumis melo
MELO3C006762.2 Cucumis melo
MELO3C015240.2 Cucumis melo
MELO3C025017.2 Cucumis melo
MELO3C025018.2 Cucumis melo
MELO3C025020.2 Cucumis melo
MELO3C025021.2 Cucumis melo
Migut.B00883 Erythranthe guttata
Migut.N00975 Erythranthe guttata
Nitab4.5_0000800g0060 Nicotiana tabacum
Nitab4.5_0002516g0010 Nicotiana tabacum
Nitab4.5_0003573g0030 Nicotiana tabacum
Nitab4.5_0003573g0040 Nicotiana tabacum
Nitab4.5_0003573g0050 Nicotiana tabacum
Nitab4.5_0005662g0010 Nicotiana tabacum
Nn3g21954 Nelumbo nucifera
Nn3g21955 Nelumbo nucifera
Nn3g21957 Nelumbo nucifera
Nn4g25284 Nelumbo nucifera
Nn5g26791 Nelumbo nucifera
Oeu061905.1 Olea europaea
Oeu062782.1 Olea europaea
Oeu062787.1 Olea europaea
Oeu062790.1 Olea europaea
Peaxi162Scf00194g00002 Petunia axillaris
PGR083G0845 Punica granatum
PGSC0003DMG400018282 Solanum tuberosum
Phvul.003G124200 Phaseolus vulgaris
Phvul.009G221100 Phaseolus vulgaris
Phvul.009G221200 Phaseolus vulgaris
Phvul.009G221300 Phaseolus vulgaris
Phvul.009G221400 Phaseolus vulgaris
Phvul.009G221500 Phaseolus vulgaris
Potri.005G002500 Populus trichocarpa
Potri.005G002600 Populus trichocarpa
Potri.010G003900 Populus trichocarpa
Potri.013G001800 Populus trichocarpa
Potri.013G001900 Populus trichocarpa
Potri.013G002000 Populus trichocarpa
Prupe.1G207900 Prunus persica
Prupe.4G278700 Prunus persica
Prupe.6G304200 Prunus persica
Prupe.6G304300 Prunus persica
Psat1g016840 Pisum sativum
Psat1g017000 Pisum sativum
Psat4g020920 Pisum sativum
PSO761G0534 Papaver somniferum
QL06p014681 Quercus lobata
RcHm_v2.0_Chr1g0321401 Rosa chinensis
RcHm_v2.0_Chr3g0458591 Rosa chinensis
RcHm_v2.0_Chr4g0427981 Rosa chinensis
Rhsim05G0122900 Rhododendron simsii
Rhsim11G0104900 Rhododendron simsii
Sabra05G0014100 Salix brachista
Sabra10G0003300 Salix brachista
Sabra13G0001300 Salix brachista
Sabra13G0001400 Salix brachista
Sabra13G0005300 Salix brachista
Sc16g0009410 Simmondsia chinensis
Sc25g0001810 Simmondsia chinensis
Sed0002745 Sechium edule
Sed0003640 Sechium edule
Sed0005500 Sechium edule
Sed0009609 Sechium edule
Sed0011742 Sechium edule
Sed0012842 Sechium edule
Sed0013340 Sechium edule
Sed0016802 Sechium edule
Sed0018176 Sechium edule
Sed0018337 Sechium edule
Sed0022046 Sechium edule
Sed0026735 Sechium edule
Sed0027158 Sechium edule
Solyc01g101260.2 Solanum lycopersicum
Sopen01g044710 Solanum pennellii
Sp3g04720 Schrenkiella parvula
Sp3g15700 Schrenkiella parvula
TAR362G0276 Trochodendron aralioides
TAR633G1086 Trochodendron aralioides
THA.LOC104818754 Tarenaya hassleriana
Thecc.04G314700 Theobroma cacao
Thecc.05G316300 Theobroma cacao
Thecc.05G329700 Theobroma cacao
Thecc.09G084900 Theobroma cacao
Thhalv10005460m.g Eutrema salsugineum
Thhalv10021847m.g Eutrema salsugineum
Thhalv10022047m.g Eutrema salsugineum
TPR.G29235 Trifolium pratense
TPR.G29438 Trifolium pratense
TWI12G1307 Tripterygium wilfordii
TWI53G1360 Tripterygium wilfordii
TWI56G1053 Tripterygium wilfordii
vmacro23432 Vaccinium macrocarpon

User provided reference genes

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