Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG11G4930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1256 Anthoceros agrestis
Actinidia14689 Actinidia chinensis
Actinidia22006 Actinidia chinensis
Actinidia40451 Actinidia chinensis
Ah.09g225730 Amaranthus hybridus
Ah.10g034730 Amaranthus hybridus
AL6G37880 Arabidopsis lyrata
Aqoxy7G03734 Aquilegia oxysepala
Aqoxy7G03975 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.33VMBZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6SKZ8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ED9HPN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KXQV93 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KZF81I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WT3AEF Arachis hypogaea
AT5G25940 Arabidopsis thaliana
ATR0705G074 Amborella trichopoda
ATR1156G016 Amborella trichopoda
Atru.chr7.1189 Acer truncatum
Atru.chr7.2049 Acer truncatum
AUR62009221 Chenopodium quinoa
AUR62011080 Chenopodium quinoa
AUR62011081 Chenopodium quinoa
AUR62011082 Chenopodium quinoa
AUR62033463 Chenopodium quinoa
AUR62033464 Chenopodium quinoa
AUR62040220 Chenopodium quinoa
BcaB07g29975 Brassica carinata
BcaB07g29976 Brassica carinata
BcaC03g17885 Brassica carinata
BolC2t11986H Brassica oleracea
BraA02t08918Z Brassica rapa
CAN.G1444.3 Capsicum annuum
CAN.G354.42 Capsicum annuum
CAN.G377.30 Capsicum annuum
CAN.G594.21 Capsicum annuum
CANSAT11G2328 Cannabis sativa
CANSAT25G2762 Cannabis sativa
CANSAT35G1724 Cannabis sativa
CARHR187500 Cardamine hirsuta
Carub.0006s2368 Capsella rubella
Ca_03357_v3 Cicer arietinum L.
Ca_21700_v3 Cicer arietinum L.
CBR_g24167 Chara braunii
Cc06_g08840 Coffea canephora
Cc08_g09970 Coffea canephora
CDE01G0101 Ceratophyllum demersum
CDE02G0291 Ceratophyllum demersum
CDE02G0791 Ceratophyllum demersum
CDE02G1509 Ceratophyllum demersum
CDE02G2906 Ceratophyllum demersum
CDE04G0787 Ceratophyllum demersum
CDE09G0667 Ceratophyllum demersum
CDE09G1366 Ceratophyllum demersum
Cfa003342 Carpinus fangiana
Ciclev10009984m.g Citrus clementina
CiPaw.03G241300 Carya illinoinensis
CiPaw.04G170000 Carya illinoinensis
CiPaw.07G201900 Carya illinoinensis
CiPaw.08G027500 Carya illinoinensis
ClCG08G012060 Citrullus lanatus
ClCG11G002880 Citrullus lanatus
COL.COLO4_05755 Corchorus olitorius
COL.COLO4_21004 Corchorus olitorius
Cpa.g.sc7.224 Carica papaya
CsaV3_2G002720 Cucumis sativus L.
CsaV3_2G030650 Cucumis sativus L.
CSS0013973 Camellia sinensis var. sinensis
CSS0029549 Camellia sinensis var. sinensis
CSS0031018 Camellia sinensis var. sinensis
DCAR_004460 Daucus carota
DCAR_014863 Daucus carota
DCAR_017835 Daucus carota
DCAR_017836 Daucus carota
Dinv11229 Davidia involucrata
Dinv11230 Davidia involucrata
Dinv23397 Davidia involucrata
Dinv27936 Davidia involucrata
Dinv36554 Davidia involucrata
Dinv41534 Davidia involucrata
Duzib150G1145 Durio zibethinus
Duzib150G1498 Durio zibethinus
Duzib150G1679 Durio zibethinus
Duzib168G0928 Durio zibethinus
Duzib168G1182 Durio zibethinus
Duzib187G0842 Durio zibethinus
ECA233G3884 Erigeron canadensis
ECA236G1143 Erigeron canadensis
EL10Ac2g03970 Beta vulgaris
EL10Ac8g18605 Beta vulgaris
EL10Ac8g18606 Beta vulgaris
EL10Ac8g18607 Beta vulgaris
Eucgr.C00614 Eucalyptus grandis
Eucgr.C01130 Eucalyptus grandis
Eucgr.C04179 Eucalyptus grandis
Eucgr.L00290 Eucalyptus grandis
Eucgr.L00292 Eucalyptus grandis
Eucgr.L00293 Eucalyptus grandis
FAN15G1552 Fragaria x ananassa
FAN19G0901 Fragaria x ananassa
FAN20G1302 Fragaria x ananassa
FAN23G1098 Fragaria x ananassa
FAN23G2479 Fragaria x ananassa
FAN26G2015 Fragaria x ananassa
FAN26G2099 Fragaria x ananassa
FAN26G3215 Fragaria x ananassa
FAN27G1016 Fragaria x ananassa
FvH4_1g03760 Fragaria vesca
FvH4_2g35210 Fragaria vesca
Glyma.05G008900 Glycine max
Glyma.05G009000 Glycine max
Glyma.05G009100 Glycine max
Glyma.06G216500 Glycine max
Glyma.17G117100 Glycine max
Glyma.17G117150 Glycine max
Glyma.17G117200 Glycine max
Glyma.17G192100 Glycine max
Gohir.A05G018100 Gossypium hirsutum
Gohir.A05G018200 Gossypium hirsutum
Gohir.A06G057500 Gossypium hirsutum
Gohir.A06G091100 Gossypium hirsutum
Gohir.A07G022229 Gossypium hirsutum
Gohir.D05G019000 Gossypium hirsutum
Gohir.D05G019100 Gossypium hirsutum
Gohir.D06G055800 Gossypium hirsutum
Gohir.D06G090300 Gossypium hirsutum
Gohir.D07G024500 Gossypium hirsutum
Gohir.D07G024700 Gossypium hirsutum
Gorai.001G025600 Gossypium raimondii
Gorai.001G025800 Gossypium raimondii
Gorai.009G019400 Gossypium raimondii
Gorai.009G019500 Gossypium raimondii
Gorai.010G065100 Gossypium raimondii
Gorai.010G104000 Gossypium raimondii
GSVIVG01015498001 Vitis vinifera
GSVIVG01035318001 Vitis vinifera
HanXRQChr05g0140651 Helianthus annuus
HanXRQChr05g0140661 Helianthus annuus
HanXRQChr05g0140671 Helianthus annuus
HanXRQChr05g0140681 Helianthus annuus
HanXRQChr07g0193141 Helianthus annuus
HanXRQChr10g0316821 Helianthus annuus
Haze_25618 Corylus avellana
Hma1.2p1_0154F.1_g068020 Hydrangea macrophylla
HPP92_005157 Vanilla planifolia
HPP92_008669 Vanilla planifolia
HPP92_008720 Vanilla planifolia
Hund03375 Selenicereus undatus
Hund09147 Selenicereus undatus
Hund19489 Selenicereus undatus
Hund26479 Selenicereus undatus
Hund26480 Selenicereus undatus
Hund26482 Selenicereus undatus
Lalb_Chr07g0178771 Lupinus albus
Lalb_Chr12g0197801 Lupinus albus
Lalb_Chr13g0302001 Lupinus albus
Lalb_Chr13g0302011 Lupinus albus
Lalb_Chr24g0402691 Lupinus albus
Lj4g0003728 Lotus japonicus
Lj4g0013806 Lotus japonicus
Lj4g0028129 Lotus japonicus
Lsat_1_v5_gn_6_7760 Lactuca sativa
Manes.06G053700 Manihot esculenta
Manes.08G149000 Manihot esculenta
Manes.09G142900 Manihot esculenta
Manes.14G129900 Manihot esculenta
Mapoly0030s0072 Marchantia polymorpha
MBI01_g26913_MAGBIO Magnolia biondii
MBI04_g38195_MAGBIO Magnolia biondii
MD02G1036100 Malus domestica
MD02G1036200 Malus domestica
MD08G1110000 Malus domestica
MD15G1176300 Malus domestica
MD15G1176400 Malus domestica
Medtr1g007360 Medicago truncatula
Medtr3g110390 Medicago truncatula
Medtr4g113820 Medicago truncatula
MELO3C004522.2 Cucumis melo
MELO3C011124.2 Cucumis melo
Migut.A00178 Erythranthe guttata
Migut.A00184 Erythranthe guttata
Migut.B00619 Erythranthe guttata
Migut.E01541 Erythranthe guttata
MSTRG.14032 Avicennia marina
MSTRG.16575 Avicennia marina
MSTRG.25917 Avicennia marina
MSTRG.25922 Avicennia marina
Nitab4.5_0000318g0130 Nicotiana tabacum
Nitab4.5_0001164g0030 Nicotiana tabacum
Nitab4.5_0002021g0130 Nicotiana tabacum
Nitab4.5_0003558g0020 Nicotiana tabacum
Nitab4.5_0005563g0010 Nicotiana tabacum
Nn1g07391 Nelumbo nucifera
Nn2g11954 Nelumbo nucifera
Nn2g11955 Nelumbo nucifera
Nn2g11956 Nelumbo nucifera
Nn4g24748 Nelumbo nucifera
Nn8g39036 Nelumbo nucifera
Nn8g39383 Nelumbo nucifera
Nn8g41165 Nelumbo nucifera
Oeu007955.1 Olea europaea
Oeu008299.1 Olea europaea
Oeu026162.1 Olea europaea
Os02g0227200 Oryza sativa ssp. japonica
Os06g0141400 Oryza sativa ssp. japonica
Os06g0141600 Oryza sativa ssp. japonica
Os06g0141700 Oryza sativa ssp. japonica
Os06g0142200 Oryza sativa ssp. japonica
Os06g0142300 Oryza sativa ssp. japonica
Os06g0142350 Oryza sativa ssp. japonica
Os06g0142400 Oryza sativa ssp. japonica
Peaxi162Scf00699g00638 Petunia axillaris
Peaxi162Scf00984g00248 Petunia axillaris
PGR044G2285 Punica granatum
PGR142G1930 Punica granatum
PGSC0003DMG400018965 Solanum tuberosum
PGSC0003DMG400020681 Solanum tuberosum
PGSC0003DMG402007628 Solanum tuberosum
Phvul.001G074600 Phaseolus vulgaris
Phvul.003G162150 Phaseolus vulgaris
Phvul.003G162200 Phaseolus vulgaris
Phvul.009G198400 Phaseolus vulgaris
Potri.004G184000 Populus trichocarpa
Potri.009G143800 Populus trichocarpa
Potri.019G033700 Populus trichocarpa
Pp3c10_3120 Physcomitrium patens
Pp3c15_22070 Physcomitrium patens
Prupe.1G444300 Prunus persica
Prupe.7G239200 Prunus persica
Psat2g066360 Pisum sativum
Psat4g044920 Pisum sativum
Psat4g045000 Pisum sativum
Psat4g045040 Pisum sativum
Psat4g045160 Pisum sativum
Psat5g018360 Pisum sativum
Psat6g036120 Pisum sativum
PSO170G0969 Papaver somniferum
PSO210G4610 Papaver somniferum
PSO210G7579 Papaver somniferum
PSO455G0200 Papaver somniferum
QL02p087709 Quercus lobata
QL12p040893 Quercus lobata
RcHm_v2.0_Chr2g0089171 Rosa chinensis
RcHm_v2.0_Chr6g0306721 Rosa chinensis
Rhsim01G0077000 Rhododendron simsii
Rhsim04G0235000 Rhododendron simsii
Rhsim07G0145300 Rhododendron simsii
Sabra04G0123700 Salix brachista
Sabra09G0111500 Salix brachista
Sabra09G0114200 Salix brachista
Sabra19G0041600 Salix brachista
Sc08g0006770 Simmondsia chinensis
Sc18g0000740 Simmondsia chinensis
Sc23g0005450 Simmondsia chinensis
Sed0002388 Sechium edule
Sed0020740 Sechium edule
Sed0026165 Sechium edule
SEGI_03191 Sequoiadendron giganteum
SEGI_06446 Sequoiadendron giganteum
SEGI_20832 Sequoiadendron giganteum
SEGI_20898 Sequoiadendron giganteum
SEGI_21319 Sequoiadendron giganteum
SEGI_30522 Sequoiadendron giganteum
SEGI_31321 Sequoiadendron giganteum
SEGI_31431 Sequoiadendron giganteum
SEGI_34088 Sequoiadendron giganteum
SEGI_36395 Sequoiadendron giganteum
SEGI_40616 Sequoiadendron giganteum
SEGI_40931 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38669 Striga asiatica
SMO143G0322 Selaginella moellendorffii
Solyc08g066160.3 Solanum lycopersicum
Solyc12g006560.3 Solanum lycopersicum
Solyc12g006680.2 Solanum lycopersicum
Sopen08g019840 Solanum pennellii
Sopen12g002510 Solanum pennellii
Sopen12g002630 Solanum pennellii
Sp2g21730 Schrenkiella parvula
TAR383G0157 Trochodendron aralioides
TAR625G0044 Trochodendron aralioides
TAR626G0396 Trochodendron aralioides
TAR636G3336 Trochodendron aralioides
THA.LOC104809003 Tarenaya hassleriana
THA.LOC104811258 Tarenaya hassleriana
Thecc.02G306100 Theobroma cacao
Thecc.09G048400 Theobroma cacao
Thecc.09G122400 Theobroma cacao
Thecc.09G122600 Theobroma cacao
Thhalv10005156m.g Eutrema salsugineum
TPR.G10686 Trifolium pratense
TPR.G12397 Trifolium pratense
TPR.G24507 Trifolium pratense
TWI32G0593 Tripterygium wilfordii
TWI34G1520 Tripterygium wilfordii
TWI34G1568 Tripterygium wilfordii
TWI63G0453 Tripterygium wilfordii
unitig_37.g12924 Utricularia gibba
unitig_46.g18184 Utricularia gibba
unitig_578.g16584 Utricularia gibba
unitig_8.g5065 Utricularia gibba
vmacro03255 Vaccinium macrocarpon
vmacro20595 Vaccinium macrocarpon
vmacro23136 Vaccinium macrocarpon
VMungo0647G0149 Vigna mungo
VMungo1215G0677 Vigna mungo
Zm00001eb205020 Zea mays
Zm00001eb270310 Zea mays
Zm00001eb377390 Zea mays
Zm00001eb377400 Zea mays
Zm00001eb377410 Zea mays

User provided reference genes

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