Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06160 Brassica napus
A08p18320 Brassica napus
A09p17560 Brassica napus
Aa31LG2G10020 Aethionema arabicum
Aa31LG2G17750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1686 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2288 Anthoceros agrestis
Actinidia01702 Actinidia chinensis
Actinidia08160 Actinidia chinensis
Actinidia27788 Actinidia chinensis
Ah.02g110510 Amaranthus hybridus
Ah.02g110520 Amaranthus hybridus
Ah.03g132770 Amaranthus hybridus
Ah.11g051550 Amaranthus hybridus
Ah.11g051560 Amaranthus hybridus
AL2G16260 Arabidopsis lyrata
AL2G36310 Arabidopsis lyrata
AL4G14360 Arabidopsis lyrata
AL7G19670 Arabidopsis lyrata
AL7G22730 Arabidopsis lyrata
Aqoxy3G02917 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00L7NP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.048ZT0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5JT6XN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ACD5NX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D2MD2Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E99XLH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H1QDLV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JFTX0T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NU9AD2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U0HGVE Arachis hypogaea
AT1G60440 Arabidopsis thaliana
AT4G32180 Arabidopsis thaliana
ATR1091G022 Amborella trichopoda
ATR1091G060 Amborella trichopoda
Atru.chr11.2046 Acer truncatum
Atru.chr9.2484 Acer truncatum
AUR62005393 Chenopodium quinoa
AUR62008203 Chenopodium quinoa
AUR62014055 Chenopodium quinoa
AUR62030956 Chenopodium quinoa
BcaB03g12734 Brassica carinata
BcaB07g31214 Brassica carinata
BcaC01g01035 Brassica carinata
BcaC04g22226 Brassica carinata
BcaC07g39537 Brassica carinata
BcaC09g52003 Brassica carinata
BcaNung03143 Brassica carinata
BolC1t00673H Brassica oleracea
BolC3t21056H Brassica oleracea
BolC8t50195H Brassica oleracea
BolC9t55091H Brassica oleracea
BraA01t00582Z Brassica rapa
BraA08t33789Z Brassica rapa
BraA09t37380Z Brassica rapa
C01p06790 Brassica napus
C08p25780 Brassica napus
C09p21860 Brassica napus
CAN.G1305.24 Capsicum annuum
CAN.G1305.25 Capsicum annuum
CAN.G1305.26 Capsicum annuum
CAN.G434.2 Capsicum annuum
CANSAT01G2881 Cannabis sativa
CANSAT80G0391 Cannabis sativa
CARHR052610 Cardamine hirsuta
CARHR240110 Cardamine hirsuta
Carub.0002s0490 Capsella rubella
Carub.0007s0837 Capsella rubella
Ca_16172_v3 Cicer arietinum L.
Ca_22671_v3 Cicer arietinum L.
Cc04_g14190 Coffea canephora
Cc04_g14200 Coffea canephora
Cc11_g15230 Coffea canephora
CDE05G0711 Ceratophyllum demersum
CDE09G0155 Ceratophyllum demersum
Cfa009163 Carpinus fangiana
Cfa012329 Carpinus fangiana
Cfa019139 Carpinus fangiana
Cfa026166 Carpinus fangiana
Ciclev10018751m.g Citrus clementina
Ciclev10031717m.g Citrus clementina
CiPaw.05G152500 Carya illinoinensis
CiPaw.06G071100 Carya illinoinensis
CiPaw.12G026800 Carya illinoinensis
ClCG01G013170 Citrullus lanatus
ClCG05G025380 Citrullus lanatus
COL.COLO4_24189 Corchorus olitorius
COL.COLO4_30050 Corchorus olitorius
Cpa.g.sc69.57 Carica papaya
Cpa.g.sc76.43 Carica papaya
Cpa.g.sc76.44 Carica papaya
Cre13.g591400 Chlamydomonas reinhardtii
CsaV3_1G008520 Cucumis sativus L.
CsaV3_5G031530 Cucumis sativus L.
CSS0004440 Camellia sinensis var. sinensis
CSS0015994 Camellia sinensis var. sinensis
CSS0031123 Camellia sinensis var. sinensis
DCAR_024453 Daucus carota
DCAR_026139 Daucus carota
Dinv15282 Davidia involucrata
Dinv20647 Davidia involucrata
Dinv24838 Davidia involucrata
Dinv24839 Davidia involucrata
Dinv38584 Davidia involucrata
Duzib205G1519 Durio zibethinus
Duzib251G0962 Durio zibethinus
Duzib268G0893 Durio zibethinus
ECA232G2073 Erigeron canadensis
ECA233G5639 Erigeron canadensis
EL10Ac5g10740 Beta vulgaris
EL10Ac6g13689 Beta vulgaris
Eucgr.B03313 Eucalyptus grandis
Eucgr.K02840 Eucalyptus grandis
FAN04G0030 Fragaria x ananassa
FAN07G0786 Fragaria x ananassa
FAN12G1724 Fragaria x ananassa
FAN13G0225 Fragaria x ananassa
FAN17G3012 Fragaria x ananassa
FAN18G0214 Fragaria x ananassa
FAN18G3166 Fragaria x ananassa
FAN20G1417 Fragaria x ananassa
FAN22G2008 Fragaria x ananassa
FAN23G2840 Fragaria x ananassa
FAN24G2906 Fragaria x ananassa
FvH4_2g04960 Fragaria vesca
FvH4_4g34190 Fragaria vesca
FvH4_4g34240 Fragaria vesca
FvH4_5g05350 Fragaria vesca
Glyma.05G037900 Glycine max
Glyma.06G182100 Glycine max
Glyma.08G285700 Glycine max
Glyma.13G146900 Glycine max
Glyma.17G089200 Glycine max
Glyma.18G139100 Glycine max
Gohir.A11G001066 Gossypium hirsutum
Gohir.A11G001132 Gossypium hirsutum
Gohir.A12G143500 Gossypium hirsutum
Gohir.A12G274200 Gossypium hirsutum
Gohir.D11G000700 Gossypium hirsutum
Gohir.D12G148200 Gossypium hirsutum
Gohir.D12G274900 Gossypium hirsutum
Gorai.007G001600 Gossypium raimondii
Gorai.008G159500 Gossypium raimondii
Gorai.008G295400 Gossypium raimondii
GSVIVG01007735001 Vitis vinifera
GSVIVG01013761001 Vitis vinifera
HanXRQChr05g0149931 Helianthus annuus
HanXRQChr09g0241391 Helianthus annuus
HanXRQChr09g0272171 Helianthus annuus
HanXRQChr12g0371601 Helianthus annuus
HanXRQChr14g0430441 Helianthus annuus
Haze_07506 Corylus avellana
Haze_12196 Corylus avellana
Hma1.2p1_0176F.1_g077360 Hydrangea macrophylla
HPP92_002636 Vanilla planifolia
HPP92_004844 Vanilla planifolia
HPP92_004845 Vanilla planifolia
HPP92_004847 Vanilla planifolia
HPP92_004848 Vanilla planifolia
HPP92_004892 Vanilla planifolia
HPP92_004893 Vanilla planifolia
Hund02746 Selenicereus undatus
Hund09441 Selenicereus undatus
Hund25358 Selenicereus undatus
Lalb_Chr07g0182761 Lupinus albus
Lalb_Chr08g0236531 Lupinus albus
Lalb_Chr09g0334971 Lupinus albus
Lalb_Chr11g0071371 Lupinus albus
Lj1g0023141 Lotus japonicus
Lj3A1054T80 Lonicera japonica
Lj4g0014432 Lotus japonicus
Lj4g0026619 Lotus japonicus
Lj5A125G65 Lonicera japonica
Lj5A125G66 Lonicera japonica
Lsat_1_v5_gn_4_75160 Lactuca sativa
Lsat_1_v5_gn_5_14761 Lactuca sativa
Lsat_1_v5_gn_8_153841 Lactuca sativa
Manes.06G105400 Manihot esculenta
Manes.12G027500 Manihot esculenta
Manes.13G029200 Manihot esculenta
Manes.14G065200 Manihot esculenta
Mapoly0159s0009 Marchantia polymorpha
Mapoly0183s0006 Marchantia polymorpha
MBI10_g28015_MAGBIO Magnolia biondii
MBI16_g27090_MAGBIO Magnolia biondii
MBI16_g27091_MAGBIO Magnolia biondii
MBI19_g17425_MAGBIO Magnolia biondii
MCO01G326 Micromonas commoda
MD06G1173300 Malus domestica
MD07G1093400 Malus domestica
MD12G1113100 Malus domestica
MD13G1093600 Malus domestica
MD14G1179800 Malus domestica
MD16G1094800 Malus domestica
Medtr3g077740 Medicago truncatula
Medtr8g064850 Medicago truncatula
MELO3C002267.2 Cucumis melo
MELO3C011992.2 Cucumis melo
Migut.I00003 Erythranthe guttata
Migut.L01456 Erythranthe guttata
MSTRG.11460 Avicennia marina
MSTRG.588 Avicennia marina
Nitab4.5_0000203g0280 Nicotiana tabacum
Nitab4.5_0000514g0150 Nicotiana tabacum
Nitab4.5_0001873g0020 Nicotiana tabacum
Nitab4.5_0002403g0040 Nicotiana tabacum
Nn4g22747 Nelumbo nucifera
Oeu003463.2 Olea europaea
Oeu035995.2 Olea europaea
Oeu040833.2 Olea europaea
Os06g0207000 Oryza sativa ssp. japonica
Os09g0533100 Oryza sativa ssp. japonica
Os11g0311100 Oryza sativa ssp. japonica
Peaxi162Scf00009g00026 Petunia axillaris
Peaxi162Scf00710g00534 Petunia axillaris
PGR044G0341 Punica granatum
PGR102G2028 Punica granatum
PGSC0003DMG400013511 Solanum tuberosum
PGSC0003DMG400018148 Solanum tuberosum
Phvul.003G061300 Phaseolus vulgaris
Phvul.003G200700 Phaseolus vulgaris
Phvul.009G178200 Phaseolus vulgaris
Potri.008G189500 Populus trichocarpa
Potri.010G041800 Populus trichocarpa
Potri.012G081600 Populus trichocarpa
Potri.015G077300 Populus trichocarpa
Pp3c15_15500 Physcomitrium patens
Pp3c16_20920 Physcomitrium patens
Pp3c16_20923 Physcomitrium patens
Pp3c9_14050 Physcomitrium patens
PRCOL_00000774 Prasinoderma coloniale
Prupe.1G251800 Prunus persica
Prupe.5G172800 Prunus persica
Psat4g124600 Pisum sativum
Psat5g114960 Pisum sativum
PSO017G6228 Papaver somniferum
PSO063G2576 Papaver somniferum
PSO063G4171 Papaver somniferum
PSO339G4887 Papaver somniferum
PSO384G4317 Papaver somniferum
PSO407G0306 Papaver somniferum
PSO478G3219 Papaver somniferum
PSO541G0066 Papaver somniferum
PSO675G6069 Papaver somniferum
PSO832G2228 Papaver somniferum
QL01p041737 Quercus lobata
QL03p059844 Quercus lobata
QL04p094230 Quercus lobata
QL10p011489 Quercus lobata
RcHm_v2.0_Chr2g0138451 Rosa chinensis
RcHm_v2.0_Chr4g0439351 Rosa chinensis
RcHm_v2.0_Chr4g0443701 Rosa chinensis
RcHm_v2.0_Chr7g0193481 Rosa chinensis
Rhsim12G0044300 Rhododendron simsii
Rhsim12G0164700 Rhododendron simsii
Sabra08G0143900 Salix brachista
Sabra10G0025600 Salix brachista
Sabra12G0058400 Salix brachista
Sabra15G0102000 Salix brachista
SalBow2G2878 Salvia bowleyana
SalBow3G0703 Salvia bowleyana
SalBow5G3232 Salvia bowleyana
Sc12g0005300 Simmondsia chinensis
Sc14g0008650 Simmondsia chinensis
Sed0009202 Sechium edule
Sed0016918 Sechium edule
Sed0020413 Sechium edule
SEGI_03397 Sequoiadendron giganteum
SEGI_11835 Sequoiadendron giganteum
SEGI_20310 Sequoiadendron giganteum
SEGI_21029 Sequoiadendron giganteum
SEGI_35358 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38231 Striga asiatica
SGA_v2.0_scaffold25G10837 Striga asiatica
SHI16979 Sapria himalayana
SHI27718 Sapria himalayana
SHI27719 Sapria himalayana
SMO259G0043 Selaginella moellendorffii
SMO335G0028 Selaginella moellendorffii
Solyc03g112910.3 Solanum lycopersicum
Solyc05g005250.3 Solanum lycopersicum
Sopen03g031990 Solanum pennellii
Sopen05g001260 Solanum pennellii
Sp2g04320 Schrenkiella parvula
Sp7g29970 Schrenkiella parvula
TAR374G0439 Trochodendron aralioides
TAR622G1109 Trochodendron aralioides
TAR627G0497 Trochodendron aralioides
TAR629G2432 Trochodendron aralioides
THA.LOC104809842 Tarenaya hassleriana
THA.LOC104824552 Tarenaya hassleriana
Thecc.02G252100 Theobroma cacao
Thecc.03G013200 Theobroma cacao
Thhalv10023550m.g Eutrema salsugineum
Thhalv10024357m.g Eutrema salsugineum
TPR.G11769 Trifolium pratense
TPR.G25314 Trifolium pratense
TWI18G0748 Tripterygium wilfordii
TWI23G0205 Tripterygium wilfordii
TWI39G0669 Tripterygium wilfordii
unitig_22.g5533 Utricularia gibba
unitig_26.g9621 Utricularia gibba
vmacro01164 Vaccinium macrocarpon
vmacro16610 Vaccinium macrocarpon
vmacro16611 Vaccinium macrocarpon
vmacro16612 Vaccinium macrocarpon
vmacro21174 Vaccinium macrocarpon
VMungo0251G1404 Vigna mungo
VMungo1215G2790 Vigna mungo
VMungo1309G0042 Vigna mungo
Zm00001eb319630 Zea mays
Zm00001eb373580 Zea mays

User provided reference genes

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