Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p19520 Brassica napus
A02p33100 Brassica napus
A06p10410 Brassica napus
A06p15060 Brassica napus
A06p43480 Brassica napus
A08p30140 Brassica napus
A09p23970 Brassica napus
A09p23980 Brassica napus
Aa31LG2G7480 Aethionema arabicum
Aa31LG4G4910 Aethionema arabicum
Aa31LG7G3610 Aethionema arabicum
Actinidia04913 Actinidia chinensis
Actinidia37645 Actinidia chinensis
Ah.11g048690 Amaranthus hybridus
AL1G26270 Arabidopsis lyrata
AL1G31380 Arabidopsis lyrata
AL2G34580 Arabidopsis lyrata
AL4G15150 Arabidopsis lyrata
AL5G12000 Arabidopsis lyrata
Aqoxy3G00717 Aquilegia oxysepala
Aqoxy3G03312 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35G0RG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.58W7PF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LFLY9L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NNI2YS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U2NT3P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8DGG3 Arachis hypogaea
AT1G14380 Arabidopsis thaliana
AT1G18840 Arabidopsis thaliana
AT1G74690 Arabidopsis thaliana
AT2G02790 Arabidopsis thaliana
ATR1120G171 Amborella trichopoda
Atru.chr11.1843 Acer truncatum
Atru.chr9.2301 Acer truncatum
AUR62008372 Chenopodium quinoa
AUR62021725 Chenopodium quinoa
BcaB02g06490 Brassica carinata
BcaB03g12951 Brassica carinata
BcaB05g24868 Brassica carinata
BcaB06g28977 Brassica carinata
BcaB07g30325 Brassica carinata
BcaB07g30691 Brassica carinata
BcaB07g31902 Brassica carinata
BcaB07g32206 Brassica carinata
BcaC02g09570 Brassica carinata
BcaC03g14393 Brassica carinata
BcaC03g15522 Brassica carinata
BcaC03g17167 Brassica carinata
BcaC04g21514 Brassica carinata
BcaC05g25338 Brassica carinata
BcaC05g25340 Brassica carinata
BcaC05g25786 Brassica carinata
BcaC06g34037 Brassica carinata
BcaC06g34040 Brassica carinata
BcaC07g38954 Brassica carinata
BcaNung05963 Brassica carinata
BolC2t09241H Brassica oleracea
BolC2t11181H Brassica oleracea
BolC5t29972H Brassica oleracea
BolC5t30426H Brassica oleracea
BolC7t43851H Brassica oleracea
BolC8t49524H Brassica oleracea
BolC9t55947H Brassica oleracea
BraA02t06989Z Brassica rapa
BraA02t08333Z Brassica rapa
BraA06t24221Z Brassica rapa
BraA06t24621Z Brassica rapa
BraA06t27233Z Brassica rapa
BraA08t34948Z Brassica rapa
BraA09t38002Z Brassica rapa
C02p32060 Brassica napus
C02p50900 Brassica napus
C04p44260 Brassica napus
C05p12190 Brassica napus
C05p17260 Brassica napus
C07p33390 Brassica napus
C08p19000 Brassica napus
C09p30870 Brassica napus
CAN.G206.127 Capsicum annuum
CAN.G279.20 Capsicum annuum
CANSAT64G0462 Cannabis sativa
CANSAT64G2301 Cannabis sativa
CANSAT64G2703 Cannabis sativa
CANSAT64G2783 Cannabis sativa
CANSAT80G1816 Cannabis sativa
CARHR014820 Cardamine hirsuta
CARHR019490 Cardamine hirsuta
CARHR067980 Cardamine hirsuta
CARHR145230 Cardamine hirsuta
CARHR218400 Cardamine hirsuta
Carub.0001s1408 Capsella rubella
Carub.0001s1849 Capsella rubella
Carub.0002s2148 Capsella rubella
Carub.0005s0170 Capsella rubella
Ca_04752_v3 Cicer arietinum L.
Ca_21839_v3 Cicer arietinum L.
Cc07_g03150 Coffea canephora
Cc11_g13360 Coffea canephora
CDE04G1492 Ceratophyllum demersum
Cfa012546 Carpinus fangiana
Ciclev10019494m.g Citrus clementina
Ciclev10031221m.g Citrus clementina
CiPaw.04G018800 Carya illinoinensis
CiPaw.11G039800 Carya illinoinensis
COL.COLO4_14046 Corchorus olitorius
COL.COLO4_23031 Corchorus olitorius
Cpa.g.c33966 Carica papaya
Cpa.g.sc17.225 Carica papaya
Cpa.g.sc183.22 Carica papaya
CsaV3_1G007860 Cucumis sativus L.
CSS0000973 Camellia sinensis var. sinensis
CSS0001840 Camellia sinensis var. sinensis
CSS0010555 Camellia sinensis var. sinensis
CSS0034464 Camellia sinensis var. sinensis
CSS0045533 Camellia sinensis var. sinensis
DCAR_011147 Daucus carota
DCAR_031045 Daucus carota
Dinv06523 Davidia involucrata
Dinv19930 Davidia involucrata
Dinv33736 Davidia involucrata
Dinv34182 Davidia involucrata
Dinv34213 Davidia involucrata
Duzib068G0721 Durio zibethinus
Duzib084G0939 Durio zibethinus
Duzib248G0296 Durio zibethinus
Duzib251G0634 Durio zibethinus
Duzib268G0700 Durio zibethinus
ECA232G1025 Erigeron canadensis
ECA232G1127 Erigeron canadensis
ECA238G3074 Erigeron canadensis
ECA246G3053 Erigeron canadensis
EL10Ac5g10957 Beta vulgaris
Eucgr.B00458 Eucalyptus grandis
Eucgr.G02532 Eucalyptus grandis
Eucgr.J01221 Eucalyptus grandis
FAN04G0109 Fragaria x ananassa
FAN07G1356 Fragaria x ananassa
FAN08G1031 Fragaria x ananassa
FAN12G1719 Fragaria x ananassa
FAN13G2329 Fragaria x ananassa
FAN17G2076 Fragaria x ananassa
FAN18G2662 Fragaria x ananassa
FAN22G0371 Fragaria x ananassa
FvH4_4g31720 Fragaria vesca
FvH4_5g15290 Fragaria vesca
Glyma.01G043800 Glycine max
Glyma.02G019700 Glycine max
Glyma.04G173100 Glycine max
Glyma.05G028600 Glycine max
Glyma.06G191200 Glycine max
Glyma.08G297500 Glycine max
Glyma.17G098200 Glycine max
Glyma.18G124200 Glycine max
Gohir.A07G064100 Gossypium hirsutum
Gohir.A11G029621 Gossypium hirsutum
Gohir.A13G071800 Gossypium hirsutum
Gohir.A13G072200 Gossypium hirsutum
Gohir.D07G068900 Gossypium hirsutum
Gohir.D11G033000 Gossypium hirsutum
Gohir.D13G072100 Gossypium hirsutum
Gohir.D13G072200 Gossypium hirsutum
Gorai.001G072400 Gossypium raimondii
Gorai.007G035800 Gossypium raimondii
Gorai.013G082700 Gossypium raimondii
Gorai.013G082900 Gossypium raimondii
GSVIVG01008043001 Vitis vinifera
GSVIVG01011360001 Vitis vinifera
GSVIVG01020054001 Vitis vinifera
HanXRQChr02g0056381 Helianthus annuus
HanXRQChr09g0265481 Helianthus annuus
HanXRQChr09g0271061 Helianthus annuus
HanXRQChr14g0449911 Helianthus annuus
HanXRQChr15g0474141 Helianthus annuus
Haze_07361 Corylus avellana
Haze_14564 Corylus avellana
Hma1.2p1_0265F.1_g106630 Hydrangea macrophylla
Hma1.2p1_0449F.1_g155190 Hydrangea macrophylla
Hma1.2p1_1617F.1_g293820 Hydrangea macrophylla
Hma1.2p1_2815F.1_g328920 Hydrangea macrophylla
HPP92_009115 Vanilla planifolia
Hund09362 Selenicereus undatus
Lalb_Chr04g0256241 Lupinus albus
Lalb_Chr07g0177911 Lupinus albus
Lalb_Chr07g0177931 Lupinus albus
Lalb_Chr10g0098031 Lupinus albus
Lalb_Chr12g0196781 Lupinus albus
Lalb_Chr17g0340441 Lupinus albus
Lj1g0023346 Lotus japonicus
Lj1g0025876 Lotus japonicus
Lj2g0009833 Lotus japonicus
Lj4g0008436 Lotus japonicus
Lj6g0026189 Lotus japonicus
Lj7A399T59 Lonicera japonica
Lj7A441G20 Lonicera japonica
Lj7A441T21 Lonicera japonica
Lsat_1_v5_gn_2_88840 Lactuca sativa
Lsat_1_v5_gn_3_100200 Lactuca sativa
Lsat_1_v5_gn_3_102080 Lactuca sativa
Lsat_1_v5_gn_4_177040 Lactuca sativa
Lsat_1_v5_gn_5_6641 Lactuca sativa
Manes.05G098175 Manihot esculenta
Manes.06G095300 Manihot esculenta
Manes.14G076000 Manihot esculenta
MBI01_g12913_MAGBIO Magnolia biondii
MD06G1189500 Malus domestica
MD13G1077100 Malus domestica
MD14G1196500 Malus domestica
MD16G1077200 Malus domestica
Medtr4g108140 Medicago truncatula
Medtr5g038620 Medicago truncatula
MELO3C002201.2 Cucumis melo
Migut.H00900 Erythranthe guttata
Migut.L01329 Erythranthe guttata
MSTRG.15482 Avicennia marina
MSTRG.23954 Avicennia marina
MSTRG.3224 Avicennia marina
MSTRG.3320 Avicennia marina
Nitab4.5_0000002g0360 Nicotiana tabacum
Nitab4.5_0000564g0220 Nicotiana tabacum
Nitab4.5_0000879g0020 Nicotiana tabacum
Nitab4.5_0003081g0040 Nicotiana tabacum
Nitab4.5_0006635g0020 Nicotiana tabacum
Nitab4.5_0007413g0020 Nicotiana tabacum
Nn1g08728 Nelumbo nucifera
Nn2g11970 Nelumbo nucifera
Nn3g17154 Nelumbo nucifera
Nn3g20085 Nelumbo nucifera
Nn3g20086 Nelumbo nucifera
Nn4g23077 Nelumbo nucifera
Oeu021374.1 Olea europaea
Oeu060926.1 Olea europaea
Oeu062083.1 Olea europaea
Os01g0716200 Oryza sativa ssp. japonica
Os05g0535900 Oryza sativa ssp. japonica
Peaxi162Scf00129g00418 Petunia axillaris
Peaxi162Scf00451g00939 Petunia axillaris
Peaxi162Scf01030g00120 Petunia axillaris
PGR083G2227 Punica granatum
PGR119G0400 Punica granatum
PGSC0003DMG400001315 Solanum tuberosum
PGSC0003DMG400017629 Solanum tuberosum
Phvul.002G089200 Phaseolus vulgaris
Phvul.003G068300 Phaseolus vulgaris
Phvul.003G191700 Phaseolus vulgaris
Phvul.009G189500 Phaseolus vulgaris
Potri.012G069900 Populus trichocarpa
Potri.015G063600 Populus trichocarpa
Potri.017G079600 Populus trichocarpa
Prupe.1G269900 Prunus persica
Prupe.5G188300 Prunus persica
Psat2g122840 Pisum sativum
Psat4g052360 Pisum sativum
Psat6g175560 Pisum sativum
Psat7g209040 Pisum sativum
PSO017G6387 Papaver somniferum
PSO478G3322 Papaver somniferum
PSO591G0462 Papaver somniferum
PSO832G1450 Papaver somniferum
QL02p073389 Quercus lobata
QL02p080915 Quercus lobata
QL10p015981 Quercus lobata
RcHm_v2.0_Chr4g0440321 Rosa chinensis
RcHm_v2.0_Chr7g0180771 Rosa chinensis
Rhsim08G0066800 Rhododendron simsii
Sabra12G0049800 Salix brachista
Sabra15G0089100 Salix brachista
Sabra17G0071300 Salix brachista
SalBow1G8641 Salvia bowleyana
SalBow2G0179 Salvia bowleyana
SalBow2G0948 Salvia bowleyana
Sc04g0002510 Simmondsia chinensis
Sed0016857 Sechium edule
SGA_v2.0_scaffold135G34769 Striga asiatica
SGA_v2.0_scaffold205G41767 Striga asiatica
Solyc02g087760.3 Solanum lycopersicum
Sopen02g032490 Solanum pennellii
Sopen05g003090 Solanum pennellii
Sp1g12750 Schrenkiella parvula
Sp1g16820 Schrenkiella parvula
Sp2g13890 Schrenkiella parvula
Sp5g29810 Schrenkiella parvula
TAR374G0264 Trochodendron aralioides
TAR374G0949 Trochodendron aralioides
TAR374G1064 Trochodendron aralioides
TAR374G1480 Trochodendron aralioides
TAR622G0039 Trochodendron aralioides
TAR625G0450 Trochodendron aralioides
TAR629G3444 Trochodendron aralioides
THA.LOC104801788 Tarenaya hassleriana
THA.LOC104805141 Tarenaya hassleriana
THA.LOC104812554 Tarenaya hassleriana
THA.LOC104824088 Tarenaya hassleriana
Thecc.02G353300 Theobroma cacao
Thecc.03G081100 Theobroma cacao
Thhalv10003878m.g Eutrema salsugineum
Thhalv10007067m.g Eutrema salsugineum
Thhalv10007212m.g Eutrema salsugineum
Thhalv10018321m.g Eutrema salsugineum
TPR.G13764 Trifolium pratense
TPR.G13766 Trifolium pratense
TPR.G27378 Trifolium pratense
TWI60G1077 Tripterygium wilfordii
TWI81G0736 Tripterygium wilfordii
unitig_32.g10745 Utricularia gibba
unitig_748.g8618 Utricularia gibba
vmacro05728 Vaccinium macrocarpon
vmacro18206 Vaccinium macrocarpon
VMungo0251G2545 Vigna mungo
VMungo1215G0174 Vigna mungo
VMungo1215G3161 Vigna mungo
VMungo1309G0316 Vigna mungo
Zm00001eb154860 Zea mays
Zm00001eb294110 Zea mays
Zm00001eb356480 Zea mays

User provided reference genes

Program Settings