Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11400 Brassica napus
A02p07290 Brassica napus
A03p51890 Brassica napus
A07p29960 Brassica napus
Aa31LG1G11760 Aethionema arabicum
Aa31LG4G3430 Aethionema arabicum
Aa31LG6G2070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2846 Anthoceros agrestis
Actinidia01230 Actinidia chinensis
Actinidia12553 Actinidia chinensis
Actinidia23911 Actinidia chinensis
AL2G32910 Arabidopsis lyrata
AL7G34650 Arabidopsis lyrata
AL8G35640 Arabidopsis lyrata
Aqoxy1G02007 Aquilegia oxysepala
Aqoxy2G00653 Aquilegia oxysepala
Aqoxy4G00481 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5231CT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8AJM88 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B47NWK Arachis hypogaea
AT1G73160 Arabidopsis thaliana
AT4G19460 Arabidopsis thaliana
AT5G59070 Arabidopsis thaliana
ATR0210G040 Amborella trichopoda
ATR0602G193 Amborella trichopoda
Atru.chr2.2249 Acer truncatum
Atru.chr3.4030 Acer truncatum
Atru.chr6.2123 Acer truncatum
AUR62007442 Chenopodium quinoa
AUR62027294 Chenopodium quinoa
BcaB05g22487 Brassica carinata
BcaB05g22488 Brassica carinata
BcaB05g22544 Brassica carinata
BcaB05g22545 Brassica carinata
BcaC03g14032 Brassica carinata
BcaC08g45669 Brassica carinata
BcaC09g51405 Brassica carinata
BcaNung01776 Brassica carinata
BolC1t01319H Brassica oleracea
BolC2t07369H Brassica oleracea
BolC6t38543H Brassica oleracea
BolC6t38545H Brassica oleracea
BolC7t45541H Brassica oleracea
BraA01t01086Z Brassica rapa
BraA02t05809Z Brassica rapa
BraA03t14277Z Brassica rapa
BraA07t30634Z Brassica rapa
C01p13450 Brassica napus
C02p12710 Brassica napus
C06p34220 Brassica napus
C06p34260 Brassica napus
C07p50400 Brassica napus
CAN.G106.4 Capsicum annuum
CAN.G22.11 Capsicum annuum
CAN.G26.4 Capsicum annuum
CANSAT21G2221 Cannabis sativa
CANSAT54G3024 Cannabis sativa
CARHR066130 Cardamine hirsuta
CARHR226250 Cardamine hirsuta
CARHR285560 Cardamine hirsuta
Carub.0002s1993 Capsella rubella
Carub.0007s2175 Capsella rubella
Carub.0008s1988 Capsella rubella
Ca_22474_v3 Cicer arietinum L.
Ca_25073_v3 Cicer arietinum L.
Cc00_g01190 Coffea canephora
Cc00_g01210 Coffea canephora
Cc01_g13530 Coffea canephora
Cc02_g32740 Coffea canephora
CDE02G3210 Ceratophyllum demersum
CDE05G2459 Ceratophyllum demersum
CDE05G3667 Ceratophyllum demersum
Cfa011586 Carpinus fangiana
Cfa012644 Carpinus fangiana
Ciclev10003490m.g Citrus clementina
Ciclev10008126m.g Citrus clementina
Ciclev10028094m.g Citrus clementina
CiPaw.11G076000 Carya illinoinensis
CiPaw.12G054000 Carya illinoinensis
CiPaw.13G087200 Carya illinoinensis
ClCG07G011250 Citrullus lanatus
COL.COLO4_16717 Corchorus olitorius
COL.COLO4_17610 Corchorus olitorius
COL.COLO4_18604 Corchorus olitorius
Cpa.g.sc305.3 Carica papaya
Cpa.g.sc81.53 Carica papaya
CsaV3_4G007000 Cucumis sativus L.
CSS0015091 Camellia sinensis var. sinensis
CSS0025193 Camellia sinensis var. sinensis
CSS0041115 Camellia sinensis var. sinensis
CSS0043692 Camellia sinensis var. sinensis
DCAR_007417 Daucus carota
DCAR_013142 Daucus carota
DCAR_030954 Daucus carota
Dinv09431 Davidia involucrata
Dinv14966 Davidia involucrata
Dinv17067 Davidia involucrata
Dinv37455 Davidia involucrata
Dinv43011 Davidia involucrata
Dinv43086 Davidia involucrata
Duzib205G1217 Durio zibethinus
ECA233G1423 Erigeron canadensis
ECA233G3110 Erigeron canadensis
ECA248G1912 Erigeron canadensis
EL10Ac5g11877 Beta vulgaris
Eucgr.B02295 Eucalyptus grandis
Eucgr.E01172 Eucalyptus grandis
Eucgr.F03250 Eucalyptus grandis
FAN03G1275 Fragaria x ananassa
FAN04G2536 Fragaria x ananassa
FAN08G0805 Fragaria x ananassa
FAN08G2266 Fragaria x ananassa
FAN11G1105 Fragaria x ananassa
FAN11G3631 Fragaria x ananassa
FAN13G0809 Fragaria x ananassa
FAN15G0963 Fragaria x ananassa
FAN16G0256 Fragaria x ananassa
FAN16G0338 Fragaria x ananassa
FAN16G0365 Fragaria x ananassa
FAN17G1688 Fragaria x ananassa
FAN18G0454 Fragaria x ananassa
FAN21G0287 Fragaria x ananassa
FAN21G1775 Fragaria x ananassa
FAN25G2358 Fragaria x ananassa
FAN25G2827 Fragaria x ananassa
FvH4_3g18700 Fragaria vesca
FvH4_3g37200 Fragaria vesca
FvH4_5g24400 Fragaria vesca
Glyma.01G151200 Glycine max
Glyma.09G216200 Glycine max
Glyma.13G339400 Glycine max
Glyma.16G075500 Glycine max
Glyma.16G106900 Glycine max
Gohir.A03G046300 Gossypium hirsutum
Gohir.A03G046350 Gossypium hirsutum
Gohir.A04G038200 Gossypium hirsutum
Gohir.A12G200200 Gossypium hirsutum
Gohir.D03G120850 Gossypium hirsutum
Gohir.D03G120900 Gossypium hirsutum
Gohir.D03G120901 Gossypium hirsutum
Gohir.D05G344800 Gossypium hirsutum
Gohir.D12G202900 Gossypium hirsutum
Gorai.003G127700 Gossypium raimondii
Gorai.003G127800 Gossypium raimondii
Gorai.008G217900 Gossypium raimondii
Gorai.009G372800 Gossypium raimondii
GSVIVG01024853001 Vitis vinifera
GSVIVG01036920001 Vitis vinifera
GSVIVG01036921001 Vitis vinifera
GSVIVG01036924001 Vitis vinifera
HanXRQChr07g0198451 Helianthus annuus
HanXRQChr08g0226801 Helianthus annuus
Haze_08016 Corylus avellana
Haze_24204 Corylus avellana
Hma1.2p1_0274F.1_g110430 Hydrangea macrophylla
Hma1.2p1_0416F.1_g148650 Hydrangea macrophylla
Hma1.2p1_1844F.1_g305130 Hydrangea macrophylla
HPP92_015501 Vanilla planifolia
HPP92_024029 Vanilla planifolia
Lalb_Chr05g0215301 Lupinus albus
Lalb_Chr09g0325151 Lupinus albus
Lalb_Chr14g0372051 Lupinus albus
Lj2g0012989 Lotus japonicus
Lj2P1070T67 Lonicera japonica
Lj3g0009457 Lotus japonicus
Lj4C90T1 Lonicera japonica
Lj4g0001277 Lotus japonicus
Lj8P379T14 Lonicera japonica
Lsat_1_v5_gn_5_169901 Lactuca sativa
Lsat_1_v5_gn_6_17480 Lactuca sativa
Manes.02G126500 Manihot esculenta
Manes.15G091700 Manihot esculenta
Manes.15G187500 Manihot esculenta
Mapoly0108s0023 Marchantia polymorpha
Mapoly0151s0028 Marchantia polymorpha
MBI05_g02669_MAGBIO Magnolia biondii
MBI06_g26006_MAGBIO Magnolia biondii
MBI07_g17044_MAGBIO Magnolia biondii
MBI08_g12257_MAGBIO Magnolia biondii
MBI14_g02862_MAGBIO Magnolia biondii
MBI19_g37021_MAGBIO Magnolia biondii
MBI19_g46608_MAGBIO Magnolia biondii
MD01G1002100 Malus domestica
MD03G1083000 Malus domestica
MD03G1239700 Malus domestica
MD06G1022000 Malus domestica
MD11G1091100 Malus domestica
MD11G1259200 Malus domestica
MD16G1288000 Malus domestica
Medtr5g026360 Medicago truncatula
Medtr8g068840 Medicago truncatula
Medtr8g071900 Medicago truncatula
MELO3C016245.2 Cucumis melo
Migut.A00496 Erythranthe guttata
Migut.E01389 Erythranthe guttata
Migut.N00907 Erythranthe guttata
MSTRG.1748 Avicennia marina
Nitab4.5_0000035g0020 Nicotiana tabacum
Nitab4.5_0000183g0020 Nicotiana tabacum
Nitab4.5_0002213g0040 Nicotiana tabacum
Nitab4.5_0004181g0030 Nicotiana tabacum
Nitab4.5_0004648g0010 Nicotiana tabacum
Nitab4.5_0005105g0030 Nicotiana tabacum
Nitab4.5_0005112g0060 Nicotiana tabacum
Nn1g09042 Nelumbo nucifera
Nn2g11292 Nelumbo nucifera
Oeu002023.1 Olea europaea
Oeu016795.1 Olea europaea
Oeu030855.1 Olea europaea
Oeu030856.1 Olea europaea
Oeu032142.1 Olea europaea
Oeu063887.1 Olea europaea
Os01g0653200 Oryza sativa ssp. japonica
Peaxi162Scf00004g00022 Petunia axillaris
Peaxi162Scf00157g00141 Petunia axillaris
Peaxi162Scf00481g00633 Petunia axillaris
Peaxi162Scf01503g00003 Petunia axillaris
PGR031G3852 Punica granatum
PGR042G0604 Punica granatum
PGR102G0405 Punica granatum
PGSC0003DMG400004989 Solanum tuberosum
PGSC0003DMG400015709 Solanum tuberosum
PGSC0003DMG400015710 Solanum tuberosum
PGSC0003DMG400032759 Solanum tuberosum
PGSC0003DMG400038291 Solanum tuberosum
Phvul.002G124600 Phaseolus vulgaris
Phvul.003G277200 Phaseolus vulgaris
Phvul.L008543 Phaseolus vulgaris
Potri.001G128300 Populus trichocarpa
Potri.003G105500 Populus trichocarpa
Potri.009G038400 Populus trichocarpa
Potri.011G097000 Populus trichocarpa
Pp3c24_13430 Physcomitrium patens
Pp3c26_15370 Physcomitrium patens
Pp3c4_27520 Physcomitrium patens
Prupe.4G170700 Prunus persica
Prupe.5G016500 Prunus persica
Prupe.5G099100 Prunus persica
Prupe.6G067300 Prunus persica
Psat2g143920 Pisum sativum
Psat4g109880 Pisum sativum
Psat4g119280 Pisum sativum
PSO063G1324 Papaver somniferum
PSO063G4285 Papaver somniferum
PSO339G5448 Papaver somniferum
PSO782G3776 Papaver somniferum
PSO782G5345 Papaver somniferum
QL01p028219 Quercus lobata
QL08p026936 Quercus lobata
QL12p002232 Quercus lobata
RcHm_v2.0_Chr5g0031511 Rosa chinensis
RcHm_v2.0_Chr5g0066941 Rosa chinensis
RcHm_v2.0_Chr7g0214801 Rosa chinensis
Rhsim01G0233400 Rhododendron simsii
Rhsim06G0205000 Rhododendron simsii
Rhsim06G0205100 Rhododendron simsii
Rhsim10G0168200 Rhododendron simsii
Rhsim11G0041400 Rhododendron simsii
Rhsim11G0041700 Rhododendron simsii
RhsimUnG0103500 Rhododendron simsii
Sabra01G0098700 Salix brachista
Sabra03G0072600 Salix brachista
Sabra09G0027400 Salix brachista
Sabra11G0090100 Salix brachista
Sabra11G0091900 Salix brachista
Sabra11G0092100 Salix brachista
Sabra16G0134700 Salix brachista
SalBow2G0290 Salvia bowleyana
SalBow8G1322 Salvia bowleyana
SalBow8G3196 Salvia bowleyana
Sc21g0006120 Simmondsia chinensis
Sc22g0002210 Simmondsia chinensis
Sed0014597 Sechium edule
SEGI_04849 Sequoiadendron giganteum
SEGI_23265 Sequoiadendron giganteum
SMO358G0247 Selaginella moellendorffii
Solyc05g047560.1 Solanum lycopersicum
Solyc08g074970.1 Solanum lycopersicum
Solyc12g056050.1 Solanum lycopersicum
Sopen05g027870 Solanum pennellii
Sopen08g023580 Solanum pennellii
Sopen12g028570 Solanum pennellii
Sp5g28120 Schrenkiella parvula
Sp6g20910 Schrenkiella parvula
Sp7g18080 Schrenkiella parvula
TAR369G0043 Trochodendron aralioides
TAR623G0540 Trochodendron aralioides
TAR623G0823 Trochodendron aralioides
TAR626G1255 Trochodendron aralioides
TAR627G0213 Trochodendron aralioides
TAR627G1129 Trochodendron aralioides
TAR629G0346 Trochodendron aralioides
THA.LOC104810745 Tarenaya hassleriana
THA.LOC104811306 Tarenaya hassleriana
THA.LOC104812201 Tarenaya hassleriana
Thecc.03G323200 Theobroma cacao
Thecc.07G104600 Theobroma cacao
Thecc.09G312400 Theobroma cacao
Thhalv10013459m.g Eutrema salsugineum
Thhalv10019571m.g Eutrema salsugineum
Thhalv10027268m.g Eutrema salsugineum
TPR.G14608 Trifolium pratense
TPR.G16808 Trifolium pratense
TPR.G23171 Trifolium pratense
TWI60G0219 Tripterygium wilfordii
unitig_0.g2197 Utricularia gibba
unitig_0.g2198 Utricularia gibba
unitig_744.g24575 Utricularia gibba
vmacro00117 Vaccinium macrocarpon
vmacro11908 Vaccinium macrocarpon
VMungo0251G2067 Vigna mungo
VMungo1080G0350 Vigna mungo
VMungo1215G0973 Vigna mungo
Zm00001eb158150 Zea mays

User provided reference genes

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