Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p26200 Brassica napus
A09p38460 Brassica napus
Aa31LG1G23060 Aethionema arabicum
Aa31LG7G10110 Aethionema arabicum
Aa31LG7G8550 Aethionema arabicum
Aa31LG7G8560 Aethionema arabicum
Aa31LG7G8570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1261 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1264 Anthoceros agrestis
Actinidia11583 Actinidia chinensis
Actinidia19601 Actinidia chinensis
Actinidia25524 Actinidia chinensis
Actinidia29116 Actinidia chinensis
Actinidia29117 Actinidia chinensis
Actinidia29646 Actinidia chinensis
Ah.01g001880 Amaranthus hybridus
Ah.12g058630 Amaranthus hybridus
Ah.12g058640 Amaranthus hybridus
AL1G41030 Arabidopsis lyrata
AL6G10720 Arabidopsis lyrata
Aqoxy4G02550 Aquilegia oxysepala
Aqoxy6G00614 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2L5AF6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JKCM11 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P626UD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UPG8QI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W984CA Arachis hypogaea
AT1G27570 Arabidopsis thaliana
AT1G27595 Arabidopsis thaliana
AT5G01400 Arabidopsis thaliana
ATR0681G274 Amborella trichopoda
ATR0767G254 Amborella trichopoda
Atru.chr13.928 Acer truncatum
Atru.chr8.2247 Acer truncatum
AUR62010455 Chenopodium quinoa
AUR62030459 Chenopodium quinoa
AUR62035395 Chenopodium quinoa
AUR62035396 Chenopodium quinoa
AUR62041883 Chenopodium quinoa
AUR62043836 Chenopodium quinoa
AUR62043838 Chenopodium quinoa
BcaB05g21927 Brassica carinata
BcaC01g01591 Brassica carinata
BcaC01g01600 Brassica carinata
BcaC01g06943 Brassica carinata
BcaC03g13074 Brassica carinata
BcaC05g26572 Brassica carinata
BcaC05g26755 Brassica carinata
BolC2t06016H Brassica oleracea
BolC3t19683H Brassica oleracea
BolC5t31336H Brassica oleracea
BraA02t04689Z Brassica rapa
BraA08t34571Z Brassica rapa
BraA09t39354Z Brassica rapa
C02p00180 Brassica napus
C03p74250 Brassica napus
C03p74290 Brassica napus
C03p74300 Brassica napus
C05p26230 Brassica napus
CAN.G129.5 Capsicum annuum
CAN.G5.4 Capsicum annuum
CAN.G723.32 Capsicum annuum
CANSAT25G3498 Cannabis sativa
CANSAT35G1010 Cannabis sativa
CARHR027140 Cardamine hirsuta
CARHR134210 Cardamine hirsuta
CARHR211780 Cardamine hirsuta
Carub.0001s2611 Capsella rubella
Carub.0006s0042 Capsella rubella
Ca_15549_v3 Cicer arietinum L.
Ca_20255_v3 Cicer arietinum L.
CBR_g40839 Chara braunii
CBR_g40840 Chara braunii
Cc06_g01300 Coffea canephora
Cc10_g08130 Coffea canephora
Cc10_g08140 Coffea canephora
CDE01G0414 Ceratophyllum demersum
CDE01G0432 Ceratophyllum demersum
CDE01G0478 Ceratophyllum demersum
CDE01G0656 Ceratophyllum demersum
Cfa017202 Carpinus fangiana
Cfa020695 Carpinus fangiana
Cfa024334 Carpinus fangiana
Ciclev10000105m.g Citrus clementina
Ciclev10002279m.g Citrus clementina
Ciclev10010921m.g Citrus clementina
CiPaw.09G209500 Carya illinoinensis
CiPaw.16G101600 Carya illinoinensis
CiPaw.16G101700 Carya illinoinensis
ClCG04G006970 Citrullus lanatus
ClCG11G014870 Citrullus lanatus
COL.COLO4_14531 Corchorus olitorius
COL.COLO4_35342 Corchorus olitorius
Cpa.g.c35822 Carica papaya
Cpa.g.sc11.146 Carica papaya
Cpa.g.sc11.147 Carica papaya
Cpa.g.sc11.148 Carica papaya
Cpa.g.sc11.150 Carica papaya
Cpa.g.sc366.1 Carica papaya
Cre02.g099200 Chlamydomonas reinhardtii
CsaV3_3G048300 Cucumis sativus L.
CsaV3_4G026290 Cucumis sativus L.
CSS0004127 Camellia sinensis var. sinensis
CSS0010393 Camellia sinensis var. sinensis
CSS0027091 Camellia sinensis var. sinensis
DCAR_015409 Daucus carota
DCAR_015410 Daucus carota
DCAR_019334 Daucus carota
Dinv22021 Davidia involucrata
Dinv23114 Davidia involucrata
Dinv23115 Davidia involucrata
Dinv44896 Davidia involucrata
Duzib093G0704 Durio zibethinus
Duzib106G0650 Durio zibethinus
Duzib116G0527 Durio zibethinus
ECA247G2269 Erigeron canadensis
ECA247G3004 Erigeron canadensis
EL10Ac1g02223 Beta vulgaris
EL10Ac5g12558 Beta vulgaris
Eucgr.B02804 Eucalyptus grandis
Eucgr.B02805 Eucalyptus grandis
Eucgr.F02175 Eucalyptus grandis
Eucgr.F02176 Eucalyptus grandis
FAN02G1802 Fragaria x ananassa
FAN04G1801 Fragaria x ananassa
FAN08G2379 Fragaria x ananassa
FAN09G0011 Fragaria x ananassa
FAN14G0363 Fragaria x ananassa
FAN14G1249 Fragaria x ananassa
FAN15G1430 Fragaria x ananassa
FAN18G1236 Fragaria x ananassa
FAN27G0691 Fragaria x ananassa
FvH4_5g33710 Fragaria vesca
FvH4_6g11410 Fragaria vesca
Glyma.01G121400 Glycine max
Glyma.03G057600 Glycine max
Glyma.04G089400 Glycine max
Glyma.06G091300 Glycine max
Gohir.A01G125300 Gossypium hirsutum
Gohir.A01G125350 Gossypium hirsutum
Gohir.A01G227200 Gossypium hirsutum
Gohir.A05G215400 Gossypium hirsutum
Gohir.D01G112900 Gossypium hirsutum
Gohir.D01G217000 Gossypium hirsutum
Gohir.D05G218640 Gossypium hirsutum
Gohir.D05G218680 Gossypium hirsutum
Gohir.D05G218720 Gossypium hirsutum
Gorai.002G137700 Gossypium raimondii
Gorai.002G263300 Gossypium raimondii
Gorai.009G225700 Gossypium raimondii
GSVIVG01009243001 Vitis vinifera
GSVIVG01009244001 Vitis vinifera
GSVIVG01011157001 Vitis vinifera
HanXRQChr02g0045991 Helianthus annuus
HanXRQChr15g0464091 Helianthus annuus
Haze_19000 Corylus avellana
Haze_19002 Corylus avellana
Haze_21006 Corylus avellana
Hma1.2p1_0362F.1_g136290 Hydrangea macrophylla
Hma1.2p1_0362F.1_g136300 Hydrangea macrophylla
Hma1.2p1_1548F.1_g290010 Hydrangea macrophylla
Hma1.2p1_3151F.1_g333260 Hydrangea macrophylla
HPP92_023652 Vanilla planifolia
Hund05234 Selenicereus undatus
Hund11005 Selenicereus undatus
Lalb_Chr08g0242721 Lupinus albus
Lalb_Chr11g0064761 Lupinus albus
Lalb_Chr13g0291221 Lupinus albus
Lj1C1165G2 Lonicera japonica
Lj1g0024990 Lotus japonicus
Lj3C953G3 Lonicera japonica
Lj3g0009832 Lotus japonicus
Lsat_1_v5_gn_1_741 Lactuca sativa
Lsat_1_v5_gn_2_85021 Lactuca sativa
Lsat_1_v5_gn_8_81640 Lactuca sativa
Lsat_1_v5_gn_8_81680 Lactuca sativa
Lsat_1_v5_gn_9_34640 Lactuca sativa
Manes.09G105300 Manihot esculenta
Manes.18G054500 Manihot esculenta
Mapoly0035s0121 Marchantia polymorpha
MBI05_g37894_MAGBIO Magnolia biondii
MBI13_g05164_MAGBIO Magnolia biondii
MBI14_g09758_MAGBIO Magnolia biondii
MBI18_g10804_MAGBIO Magnolia biondii
MCO14G537 Micromonas commoda
MD04G1153400 Malus domestica
MD04G1153500 Malus domestica
MD04G1153600 Malus domestica
MD08G1209300 Malus domestica
MD12G1166800 Malus domestica
MD15G1393300 Malus domestica
Medtr3g111090 Medicago truncatula
Medtr4g015850 Medicago truncatula
MELO3C003489.2 Cucumis melo
MELO3C025994.2 Cucumis melo
Migut.J00164 Erythranthe guttata
Migut.N02828 Erythranthe guttata
MSTRG.24416 Avicennia marina
Nitab4.5_0000377g0150 Nicotiana tabacum
Nitab4.5_0000377g0160 Nicotiana tabacum
Nitab4.5_0000490g0060 Nicotiana tabacum
Nitab4.5_0008951g0020 Nicotiana tabacum
Nitab4.5_0008951g0030 Nicotiana tabacum
Nitab4.5_0013783g0010 Nicotiana tabacum
Nn033s41618 Nelumbo nucifera
Nn2g10847 Nelumbo nucifera
Nn5g29745 Nelumbo nucifera
Oeu008411.2 Olea europaea
Oeu008650.1 Olea europaea
Oeu008651.1 Olea europaea
Oeu018833.1 Olea europaea
Oeu048894.1 Olea europaea
Os01g0694300 Oryza sativa ssp. japonica
Os01g0694400 Oryza sativa ssp. japonica
Os07g0693900 Oryza sativa ssp. japonica
Peaxi162Scf00141g01224 Petunia axillaris
Peaxi162Scf00626g00615 Petunia axillaris
Peaxi162Scf00626g00616 Petunia axillaris
PGR009G0002 Punica granatum
PGR031G0226 Punica granatum
PGR031G1745 Punica granatum
PGR148G0002 Punica granatum
PGR148G0003 Punica granatum
Phvul.009G146300 Phaseolus vulgaris
Phvul.010G000700 Phaseolus vulgaris
Potri.002G107400 Populus trichocarpa
Potri.016G116600 Populus trichocarpa
Pp3c2_10640 Physcomitrium patens
PRCOL_00002127 Prasinoderma coloniale
Prupe.1G541600 Prunus persica
Prupe.6G277600 Prunus persica
Psat2g029240 Pisum sativum
Psat5g017960 Pisum sativum
Psat5g138240 Pisum sativum
Psat7g245160 Pisum sativum
PSO339G0569 Papaver somniferum
PSO384G2988 Papaver somniferum
PSO675G0158 Papaver somniferum
PSO675G0800 Papaver somniferum
PSO675G0847 Papaver somniferum
PSO675G5325 Papaver somniferum
PSO781G0096 Papaver somniferum
QL07p019818 Quercus lobata
QL07p035631 Quercus lobata
QL12p040240 Quercus lobata
RcHm_v2.0_Chr3g0463071 Rosa chinensis
RcHm_v2.0_Chr7g0232721 Rosa chinensis
Rhsim03G0219700 Rhododendron simsii
Rhsim05G0216000 Rhododendron simsii
Rhsim07G0215000 Rhododendron simsii
RhsimUnG0048500 Rhododendron simsii
Sabra02G0084400 Salix brachista
Sabra16G0112200 Salix brachista
Sabra16G0112300 Salix brachista
SalBow2G0192 Salvia bowleyana
SalBow2G2525 Salvia bowleyana
SalBow5G3135 Salvia bowleyana
Sc01g0006420 Simmondsia chinensis
Sc02g0008370 Simmondsia chinensis
Sed0001338 Sechium edule
Sed0023558 Sechium edule
SEGI_02970 Sequoiadendron giganteum
SEGI_26848 Sequoiadendron giganteum
SEGI_29268 Sequoiadendron giganteum
SEGI_33251 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11865 Striga asiatica
SGA_v2.0_scaffold85G26731 Striga asiatica
SHI08804 Sapria himalayana
SHI08805 Sapria himalayana
SHI08807 Sapria himalayana
SHI12846 Sapria himalayana
SHI37132 Sapria himalayana
SMO141G0211 Selaginella moellendorffii
Solyc04g076900.2 Solanum lycopersicum
Solyc04g076910.3 Solanum lycopersicum
Solyc09g005330.3 Solanum lycopersicum
Solyc09g005340.3 Solanum lycopersicum
Sopen00g005720 Solanum pennellii
Sopen00g006280 Solanum pennellii
Sopen00g006940 Solanum pennellii
Sopen00g007740 Solanum pennellii
Sopen04g030560 Solanum pennellii
Sopen09g001300 Solanum pennellii
Sp1g23810 Schrenkiella parvula
Sp6g40710 Schrenkiella parvula
TAR381G0137 Trochodendron aralioides
TAR625G0456 Trochodendron aralioides
TAR636G2996 Trochodendron aralioides
THA.LOC104799842 Tarenaya hassleriana
THA.LOC104816196 Tarenaya hassleriana
THA.LOC104825811 Tarenaya hassleriana
Thecc.05G015600 Theobroma cacao
Thecc.08G078300 Theobroma cacao
Thhalv10006574m.g Eutrema salsugineum
Thhalv10012442m.g Eutrema salsugineum
TPR.G12323 Trifolium pratense
TPR.G13218 Trifolium pratense
TPR.G19560 Trifolium pratense
TPR.G7158 Trifolium pratense
TWI12G1107 Tripterygium wilfordii
TWI56G0097 Tripterygium wilfordii
TWI74G0305 Tripterygium wilfordii
unitig_21.g20303 Utricularia gibba
unitig_749.g14169 Utricularia gibba
vmacro04618 Vaccinium macrocarpon
vmacro10371 Vaccinium macrocarpon
vmacro11338 Vaccinium macrocarpon
vmacro20280 Vaccinium macrocarpon
VMungo0331G1463 Vigna mungo
VMungo0720G1056 Vigna mungo
VMungo1223G0001 Vigna mungo
VMungo1309G0573 Vigna mungo
VMungo1309G2894 Vigna mungo
Zm00001eb155980 Zea mays
Zm00001eb331590 Zea mays

User provided reference genes

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