Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p26360 Brassica napus
A03p29120 Brassica napus
A07p09800 Brassica napus
A09p14910 Brassica napus
A09p28060 Brassica napus
A09p35860 Brassica napus
Aa31LG2G1240 Aethionema arabicum
Aa31LG5G11390 Aethionema arabicum
Aa31LG9G11020 Aethionema arabicum
Aa31LG9G410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4333 Anthoceros agrestis
Actinidia01406 Actinidia chinensis
Actinidia11488 Actinidia chinensis
Actinidia22708 Actinidia chinensis
Actinidia27345 Actinidia chinensis
Actinidia28592 Actinidia chinensis
Ah.07g196900 Amaranthus hybridus
Ah.08g209130 Amaranthus hybridus
Ah.12g052200 Amaranthus hybridus
AL2G10800 Arabidopsis lyrata
AL3G19520 Arabidopsis lyrata
AL6G45340 Arabidopsis lyrata
Aqoxy7G00217 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3WGP8R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EY9GJL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GXB52G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I50STK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TU458D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WJ47TI Arachis hypogaea
AT1G64200 Arabidopsis thaliana
AT3G08560 Arabidopsis thaliana
AT4G11150 Arabidopsis thaliana
ATR1127G157 Amborella trichopoda
ATR1131G035 Amborella trichopoda
Atru.chr9.2065 Acer truncatum
AUR62002769 Chenopodium quinoa
AUR62006443 Chenopodium quinoa
AUR62010794 Chenopodium quinoa
AUR62019791 Chenopodium quinoa
AUR62029796 Chenopodium quinoa
BcaB01g01591 Brassica carinata
BcaB01g02709 Brassica carinata
BcaB05g23857 Brassica carinata
BcaB07g31443 Brassica carinata
BcaB07g31444 Brassica carinata
BcaB07g32669 Brassica carinata
BcaB07g32695 Brassica carinata
BcaC01g04639 Brassica carinata
BcaC03g16367 Brassica carinata
BcaC04g21112 Brassica carinata
BcaC04g22538 Brassica carinata
BcaC05g27080 Brassica carinata
BolC2t10223H Brassica oleracea
BolC3t15849H Brassica oleracea
BolC5t31692H Brassica oleracea
BolC9t56394H Brassica oleracea
BraA02t07638Z Brassica rapa
BraA09t37136Z Brassica rapa
BraA09t38372Z Brassica rapa
BraA09t39112Z Brassica rapa
C02p41890 Brassica napus
C03p35370 Brassica napus
C05p29610 Brassica napus
C07p15060 Brassica napus
C09p18030 Brassica napus
C09p35560 Brassica napus
CAN.G119.1 Capsicum annuum
CAN.G532.54 Capsicum annuum
CAN.G792.69 Capsicum annuum
CANSAT21G0967 Cannabis sativa
CARHR046730 Cardamine hirsuta
CARHR082860 Cardamine hirsuta
CARHR255420 Cardamine hirsuta
Carub.0002s0059 Capsella rubella
Carub.0003s0769 Capsella rubella
Carub.0006s2998 Capsella rubella
Carub.0007s1739 Capsella rubella
Ca_17501_v3 Cicer arietinum L.
Ca_19046_v3 Cicer arietinum L.
Ca_24527_v3 Cicer arietinum L.
CBR_g15960 Chara braunii
CBR_g51987 Chara braunii
Cc08_g15630 Coffea canephora
CDE02G1546 Ceratophyllum demersum
CDE06G0645 Ceratophyllum demersum
CDE08G0465 Ceratophyllum demersum
Cfa017006 Carpinus fangiana
Cfa026986 Carpinus fangiana
Ciclev10013471m.g Citrus clementina
Ciclev10022061m.g Citrus clementina
CiPaw.10G095300 Carya illinoinensis
CiPaw.10G166100 Carya illinoinensis
CiPaw.11G125300 Carya illinoinensis
CiPaw.12G086200 Carya illinoinensis
ClCG05G013920 Citrullus lanatus
COL.COLO4_16029 Corchorus olitorius
COL.COLO4_34503 Corchorus olitorius
Cpa.g.sc122.22 Carica papaya
Cpa.g.sc72.58 Carica papaya
Cre17.g734500 Chlamydomonas reinhardtii
CsaV3_3G026760 Cucumis sativus L.
CSS0008866 Camellia sinensis var. sinensis
CSS0011513 Camellia sinensis var. sinensis
CSS0023476 Camellia sinensis var. sinensis
CSS0042871 Camellia sinensis var. sinensis
DCAR_000377 Daucus carota
DCAR_006858 Daucus carota
DCAR_028919 Daucus carota
Dinv16948 Davidia involucrata
Dinv25363 Davidia involucrata
Dinv38873 Davidia involucrata
Duzib084G0107 Durio zibethinus
Duzib205G0708 Durio zibethinus
Duzib268G0569 Durio zibethinus
Duzib268G1258 Durio zibethinus
ECA240G3206 Erigeron canadensis
ECA247G1308 Erigeron canadensis
EL10Ac5g12866 Beta vulgaris
EL10Ac7g17133 Beta vulgaris
Eucgr.A00792 Eucalyptus grandis
Eucgr.E00828 Eucalyptus grandis
FAN02G2986 Fragaria x ananassa
FAN04G1024 Fragaria x ananassa
FAN05G4158 Fragaria x ananassa
FAN08G0719 Fragaria x ananassa
FAN09G0016 Fragaria x ananassa
FAN13G1566 Fragaria x ananassa
FAN13G2536 Fragaria x ananassa
FAN14G1873 Fragaria x ananassa
FAN18G2283 Fragaria x ananassa
FAN18G4343 Fragaria x ananassa
FvH4_5g03820 Fragaria vesca
FvH4_6g09500 Fragaria vesca
Glyma.05G213800 Glycine max
Glyma.05G214100 Glycine max
Glyma.05G214200 Glycine max
Glyma.08G020300 Glycine max
Glyma.08G020600 Glycine max
Glyma.11G114400 Glycine max
Glyma.12G040300 Glycine max
Gohir.A02G002100 Gossypium hirsutum
Gohir.A08G115566 Gossypium hirsutum
Gohir.A12G231200 Gossypium hirsutum
Gohir.D02G002400 Gossypium hirsutum
Gohir.D08G136300 Gossypium hirsutum
Gohir.D12G232300 Gossypium hirsutum
Gorai.004G139500 Gossypium raimondii
Gorai.005G002900 Gossypium raimondii
Gorai.008G248600 Gossypium raimondii
GSVIVG01019472001 Vitis vinifera
GSVIVG01019478001 Vitis vinifera
GSVIVG01029879001 Vitis vinifera
HanXRQChr03g0084971 Helianthus annuus
HanXRQChr10g0286121 Helianthus annuus
HanXRQChr13g0415961 Helianthus annuus
Haze_08695 Corylus avellana
Haze_21200 Corylus avellana
Hma1.2p1_0174F.1_g076700 Hydrangea macrophylla
Hma1.2p1_0952F.1_g240805 Hydrangea macrophylla
Hma1.2p1_1369F.1_g278560 Hydrangea macrophylla
HPP92_005212 Vanilla planifolia
HPP92_005213 Vanilla planifolia
HPP92_005222 Vanilla planifolia
Hund11412 Selenicereus undatus
Hund14244 Selenicereus undatus
Lalb_Chr01g0002331 Lupinus albus
Lalb_Chr05g0211661 Lupinus albus
Lalb_Chr05g0224311 Lupinus albus
Lalb_Chr09g0332671 Lupinus albus
Lalb_Chr16g0390411 Lupinus albus
Lalb_Chr24g0400041 Lupinus albus
Lj2C172G6 Lonicera japonica
Lj2C57G2 Lonicera japonica
Lj3g0013014 Lotus japonicus
Lj4g0005965 Lotus japonicus
LjContig00312_ERROPOS870357g0015962 Lotus japonicus
Lsat_1_v5_gn_4_71641 Lactuca sativa
Lsat_1_v5_gn_6_86200 Lactuca sativa
Lsat_1_v5_gn_8_158580 Lactuca sativa
Lsat_1_v5_gn_9_39760 Lactuca sativa
Manes.01G148200 Manihot esculenta
Manes.02G106800 Manihot esculenta
Mapoly0045s0035 Marchantia polymorpha
Mapoly0157s0004 Marchantia polymorpha
MBI06_g04288_MAGBIO Magnolia biondii
MBI07_g11395_MAGBIO Magnolia biondii
MBI15_g36677_MAGBIO Magnolia biondii
MCO10G142 Micromonas commoda
MD04G1177000 Malus domestica
MD06G1099600 Malus domestica
MD12G1192200 Malus domestica
MD14G1119200 Malus domestica
Medtr4g073800 Medicago truncatula
Medtr5g009720 Medicago truncatula
Medtr8g099190 Medicago truncatula
MELO3C014920.2 Cucumis melo
Migut.D02402 Erythranthe guttata
Migut.D02418 Erythranthe guttata
Migut.N02467 Erythranthe guttata
MSTRG.18782 Avicennia marina
MSTRG.21023 Avicennia marina
Nitab4.5_0000048g0290 Nicotiana tabacum
Nitab4.5_0000223g0050 Nicotiana tabacum
Nitab4.5_0002381g0010 Nicotiana tabacum
Nitab4.5_0002564g0010 Nicotiana tabacum
Nitab4.5_0002596g0020 Nicotiana tabacum
Nitab4.5_0002788g0080 Nicotiana tabacum
Nitab4.5_0002944g0180 Nicotiana tabacum
Nitab4.5_0022796g0010 Nicotiana tabacum
Nitab4.5_0025985g0010 Nicotiana tabacum
Nn2g10238 Nelumbo nucifera
Nn7g37371 Nelumbo nucifera
Oeu007215.1 Olea europaea
Oeu042382.1 Olea europaea
Oeu059592.1 Olea europaea
Os01g0222500 Oryza sativa ssp. japonica
Os01g0659200 Oryza sativa ssp. japonica
Os05g0480700 Oryza sativa ssp. japonica
Peaxi162Scf00074g01325 Petunia axillaris
Peaxi162Scf00102g01738 Petunia axillaris
Peaxi162Scf00117g01411 Petunia axillaris
Peaxi162Scf00732g00152 Petunia axillaris
PGR031G3763 Punica granatum
PGR042G0808 Punica granatum
PGSC0003DMG400004047 Solanum tuberosum
PGSC0003DMG400005833 Solanum tuberosum
Phvul.002G295400 Phaseolus vulgaris
Phvul.009G037400 Phaseolus vulgaris
Phvul.009G037500 Phaseolus vulgaris
Phvul.011G042300 Phaseolus vulgaris
Potri.013G051500 Populus trichocarpa
Potri.016G139800 Populus trichocarpa
Potri.019G029200 Populus trichocarpa
Pp3c14_26090 Physcomitrium patens
Pp3c17_22340 Physcomitrium patens
Pp3c17_22370 Physcomitrium patens
Pp3c2_21380 Physcomitrium patens
Pp3s480_10 Physcomitrium patens
Pp3s480_20 Physcomitrium patens
PRCOL_00006241 Prasinoderma coloniale
Prupe.5G113300 Prunus persica
Prupe.6G296700 Prunus persica
Psat2g184320 Pisum sativum
Psat7g028440 Pisum sativum
Psat7g175080 Pisum sativum
PSO135G0948 Papaver somniferum
PSO339G1116 Papaver somniferum
PSO384G1270 Papaver somniferum
PSO384G1925 Papaver somniferum
QL02p031748 Quercus lobata
QL07p031267 Quercus lobata
QL07p031634 Quercus lobata
RcHm_v2.0_Chr3g0460081 Rosa chinensis
RcHm_v2.0_Chr7g0195681 Rosa chinensis
Rhsim02G0240100 Rhododendron simsii
Rhsim07G0085300 Rhododendron simsii
Sabra04G0156400 Salix brachista
Sabra13G0046800 Salix brachista
Sabra19G0036000 Salix brachista
Sabra19G0039100 Salix brachista
SalBow3G3434 Salvia bowleyana
SalBow6G0216 Salvia bowleyana
Sc01g0010060 Simmondsia chinensis
Sc20g0007180 Simmondsia chinensis
Sc22g0005230 Simmondsia chinensis
Sed0000509 Sechium edule
Sed0024208 Sechium edule
SEGI_17760 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31956 Striga asiatica
SGA_v2.0_scaffold7G03985 Striga asiatica
SMO116G0079 Selaginella moellendorffii
Solyc08g008210.3 Solanum lycopersicum
Solyc08g081910.3 Solanum lycopersicum
Solyc09g048990.4 Solanum lycopersicum
Solyc12g056110.2 Solanum lycopersicum
Sopen08g004060 Solanum pennellii
Sopen08g030200 Solanum pennellii
Sopen09g016540 Solanum pennellii
Sopen12g028620 Solanum pennellii
Sp1g26440 Schrenkiella parvula
Sp2g00530 Schrenkiella parvula
Sp6g06260 Schrenkiella parvula
Sp7g21660 Schrenkiella parvula
TAR369G0380 Trochodendron aralioides
TAR369G0868 Trochodendron aralioides
TAR629G1821 Trochodendron aralioides
TAR633G0148 Trochodendron aralioides
TAR636G2043 Trochodendron aralioides
TAR636G3490 Trochodendron aralioides
THA.LOC104806428 Tarenaya hassleriana
THA.LOC104809349 Tarenaya hassleriana
THA.LOC104813033 Tarenaya hassleriana
THA.LOC104814871 Tarenaya hassleriana
THA.LOC104816156 Tarenaya hassleriana
THA.LOC104817707 Tarenaya hassleriana
Thecc.03G283400 Theobroma cacao
Thecc.04G148600 Theobroma cacao
Thhalv10022832m.g Eutrema salsugineum
Thhalv10023635m.g Eutrema salsugineum
Thhalv10028922m.g Eutrema salsugineum
TPR.G19904 Trifolium pratense
TPR.G3385 Trifolium pratense
TPR.G6684 Trifolium pratense
TWI60G1087 Tripterygium wilfordii
TWI74G0972 Tripterygium wilfordii
TWI81G0149 Tripterygium wilfordii
unitig_699.g19176 Utricularia gibba
unitig_899.g15376 Utricularia gibba
vmacro13999 Vaccinium macrocarpon
vmacro20389 Vaccinium macrocarpon
vmacro21283 Vaccinium macrocarpon
VMungo0251G2199 Vigna mungo
VMungo1127G1086 Vigna mungo
VMungo1309G0891 Vigna mungo
Zm00001eb119630 Zea mays
Zm00001eb157850 Zea mays
Zm00001eb359540 Zea mays

User provided reference genes

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