Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p17650 Brassica napus
A09p28810 Brassica napus
Aa31LG3G7420 Aethionema arabicum
Aa31LG9G11870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3673 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4853 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2117 Anthoceros agrestis
Actinidia22618 Actinidia chinensis
Actinidia23265 Actinidia chinensis
Ah.05g168830 Amaranthus hybridus
AL6G43940 Arabidopsis lyrata
AL7G18190 Arabidopsis lyrata
Aqoxy125s002 Aquilegia oxysepala
Aqoxy1G02088 Aquilegia oxysepala
Aqoxy1G04301 Aquilegia oxysepala
Aqoxy5G01267 Aquilegia oxysepala
Aqoxy6G01360 Aquilegia oxysepala
Aqoxy7G04203 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3IZ1KA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.75Q1P4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7RGS7A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AI0I01 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.II6H71 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MW41KC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S2AHNK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VN362G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YT15EQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z2DAXP Arachis hypogaea
AT4G10130 Arabidopsis thaliana
AT4G33380 Arabidopsis thaliana
ATR0100G056 Amborella trichopoda
ATR0605G347 Amborella trichopoda
Atru.chr11.91 Acer truncatum
Atru.chr13.649 Acer truncatum
Atru.chr13.650 Acer truncatum
AUR62022428 Chenopodium quinoa
AUR62022429 Chenopodium quinoa
AUR62039305 Chenopodium quinoa
BcaB01g01453 Brassica carinata
BcaB03g12802 Brassica carinata
BcaB05g23918 Brassica carinata
BcaC01g00993 Brassica carinata
BcaC04g21020 Brassica carinata
BcaC09g52142 Brassica carinata
BcaC09g52145 Brassica carinata
BolC1t00510H Brassica oleracea
BolC3t20965H Brassica oleracea
BolC3t20967H Brassica oleracea
BolC9t56492H Brassica oleracea
BraA03t15234Z Brassica rapa
BraA08t33716Z Brassica rapa
BraA09t38443Z Brassica rapa
C02p42500 Brassica napus
C03p86710 Brassica napus
C04p43500 Brassica napus
C09p36600 Brassica napus
CAN.G1335.15 Capsicum annuum
CAN.G1422.7 Capsicum annuum
CAN.G371.35 Capsicum annuum
CAN.G52.6 Capsicum annuum
CANSAT01G2416 Cannabis sativa
CANSAT11G1050 Cannabis sativa
CARHR241420 Cardamine hirsuta
CARHR261220 Cardamine hirsuta
Carub.0006s2870 Capsella rubella
Carub.0007s0711 Capsella rubella
Ca_14028_v3 Cicer arietinum L.
CBR_g3068 Chara braunii
Cc10_g04320 Coffea canephora
Cc10_g04330 Coffea canephora
CDE02G3402 Ceratophyllum demersum
CDE02G4038 Ceratophyllum demersum
Cfa018527 Carpinus fangiana
Ciclev10001804m.g Citrus clementina
Ciclev10003422m.g Citrus clementina
CiPaw.15G061600 Carya illinoinensis
CiPaw.16G045800 Carya illinoinensis
CiPaw.16G045900 Carya illinoinensis
ClCG08G015720 Citrullus lanatus
ClCG08G015730 Citrullus lanatus
COL.COLO4_26477 Corchorus olitorius
COL.COLO4_26478 Corchorus olitorius
Cpa.g.c24415.2 Carica papaya
Cpa.g.sc49.1 Carica papaya
Cre03.g163450 Chlamydomonas reinhardtii
Cre03.g165350 Chlamydomonas reinhardtii
Cre10.g444750 Chlamydomonas reinhardtii
CsaV3_2G028030 Cucumis sativus L.
CsaV3_2G028050 Cucumis sativus L.
CSS0001953 Camellia sinensis var. sinensis
CSS0015524 Camellia sinensis var. sinensis
CSS0022390 Camellia sinensis var. sinensis
CSS0022665 Camellia sinensis var. sinensis
CSS0029487 Camellia sinensis var. sinensis
DCAR_019463 Daucus carota
Dinv35973 Davidia involucrata
Dinv39328 Davidia involucrata
Dinv39329 Davidia involucrata
Duzib041G0561 Durio zibethinus
Duzib093G0320 Durio zibethinus
Duzib093G0968 Durio zibethinus
Duzib116G0153 Durio zibethinus
Duzib116G0248 Durio zibethinus
ECA246G3192 Erigeron canadensis
ECA247G1332 Erigeron canadensis
ECA247G1496 Erigeron canadensis
EL10Ac1g01784 Beta vulgaris
EL10Ac3g05247 Beta vulgaris
Eucgr.F00240 Eucalyptus grandis
Eucgr.F00241 Eucalyptus grandis
FAN15G1587 Fragaria x ananassa
FAN15G2894 Fragaria x ananassa
FAN20G2285 Fragaria x ananassa
FAN20G2977 Fragaria x ananassa
FAN27G2960 Fragaria x ananassa
FAN27G3124 Fragaria x ananassa
FvH4_2g34620 Fragaria vesca
FvH4_2g34630 Fragaria vesca
Glyma.04G037600 Glycine max
Glyma.06G038500 Glycine max
Glyma.11G102400 Glycine max
Glyma.12G141301 Glycine max
Glyma.14G082000 Glycine max
Glyma.17G243300 Glycine max
Gohir.A01G118700 Gossypium hirsutum
Gohir.A03G078312 Gossypium hirsutum
Gohir.A06G017200 Gossypium hirsutum
Gohir.D01G106900 Gossypium hirsutum
Gohir.D02G092000 Gossypium hirsutum
Gohir.D06G015300 Gossypium hirsutum
Gohir.D12G161700 Gossypium hirsutum
Gorai.002G131200 Gossypium raimondii
Gorai.005G103400 Gossypium raimondii
Gorai.010G018100 Gossypium raimondii
Gorai.010G077200 Gossypium raimondii
GSVIVG01009523001 Vitis vinifera
GSVIVG01018045001 Vitis vinifera
HanXRQChr02g0037661 Helianthus annuus
HanXRQChr02g0037671 Helianthus annuus
HanXRQChr12g0375061 Helianthus annuus
Haze_17544 Corylus avellana
Haze_17553 Corylus avellana
Haze_18960 Corylus avellana
Hma1.2p1_0982F.1_g243870 Hydrangea macrophylla
Hma1.2p1_0982F.1_g243900 Hydrangea macrophylla
HPP92_016731 Vanilla planifolia
HPP92_027223 Vanilla planifolia
Hund17586 Selenicereus undatus
Lalb_Chr14g0368771 Lupinus albus
Lalb_Chr22g0355191 Lupinus albus
Lalb_Chr23g0266991 Lupinus albus
Lalb_Chr23g0267731 Lupinus albus
Lj1g0021003 Lotus japonicus
Lj3A736T18 Lonicera japonica
Lj3g0001779 Lotus japonicus
Lj3P736T14 Lonicera japonica
Lj4A54G47 Lonicera japonica
Lj4A775T63 Lonicera japonica
Lj4C53T13 Lonicera japonica
Lj5g0018432 Lotus japonicus
Lsat_1_v5_gn_1_20241 Lactuca sativa
Lsat_1_v5_gn_1_20261 Lactuca sativa
Lsat_1_v5_gn_6_113661 Lactuca sativa
Manes.03G089400 Manihot esculenta
Manes.05G171920 Manihot esculenta
Manes.05G171940 Manihot esculenta
Manes.05G172000 Manihot esculenta
Manes.18G032500 Manihot esculenta
Mapoly0020s0146 Marchantia polymorpha
Mapoly0103s0014 Marchantia polymorpha
Mapoly2945s0001 Marchantia polymorpha
MBI02_g17341_MAGBIO Magnolia biondii
MCO03G389 Micromonas commoda
MCO11G730 Micromonas commoda
MCO12G397 Micromonas commoda
MCO13G142 Micromonas commoda
MCO16G503 Micromonas commoda
MD08G1103400 Malus domestica
MD08G1103500 Malus domestica
MD15G1084700 Malus domestica
MD15G1084800 Malus domestica
Medtr1g019780 Medicago truncatula
Medtr3g006810 Medicago truncatula
Medtr3g101480 Medicago truncatula
Medtr4g074580 Medicago truncatula
Medtr6g003930 Medicago truncatula
MELO3C010883.2 Cucumis melo
MELO3C010884.2 Cucumis melo
Migut.C00595 Erythranthe guttata
Migut.N02701 Erythranthe guttata
Migut.N02702 Erythranthe guttata
MSTRG.22266 Avicennia marina
MSTRG.22267 Avicennia marina
MSTRG.24326 Avicennia marina
Nitab4.5_0000686g0060 Nicotiana tabacum
Nitab4.5_0001024g0010 Nicotiana tabacum
Nitab4.5_0001024g0020 Nicotiana tabacum
Nitab4.5_0001101g0080 Nicotiana tabacum
Nitab4.5_0004376g0080 Nicotiana tabacum
Nitab4.5_0004897g0010 Nicotiana tabacum
Nitab4.5_0004897g0020 Nicotiana tabacum
Nn1g05835 Nelumbo nucifera
Nn5g30226 Nelumbo nucifera
Nn5g30229 Nelumbo nucifera
Oeu006152.1 Olea europaea
Oeu009550.1 Olea europaea
Oeu011541.1 Olea europaea
Oeu011560.1 Olea europaea
Os02g0761600 Oryza sativa ssp. japonica
Os06g0214100 Oryza sativa ssp. japonica
Os08g0474600 Oryza sativa ssp. japonica
Os09g0460000 Oryza sativa ssp. japonica
Peaxi162Scf00528g00417 Petunia axillaris
Peaxi162Scf00929g00314 Petunia axillaris
PGR083G1022 Punica granatum
PGR083G1082 Punica granatum
PGSC0003DMG400007986 Solanum tuberosum
PGSC0003DMG400015418 Solanum tuberosum
PGSC0003DMG400041182 Solanum tuberosum
Phvul.001G021000 Phaseolus vulgaris
Phvul.009G063800 Phaseolus vulgaris
Phvul.011G031400 Phaseolus vulgaris
Potri.002G127700 Populus trichocarpa
Potri.014G031900 Populus trichocarpa
Potri.014G032000 Populus trichocarpa
Pp3c12_23290 Physcomitrium patens
Pp3c18_17490 Physcomitrium patens
Pp3c19_17840 Physcomitrium patens
Pp3c22_5250 Physcomitrium patens
Pp3c22_5260 Physcomitrium patens
Pp3c27_1800 Physcomitrium patens
Pp3c2_7000 Physcomitrium patens
Pp3c3_32530 Physcomitrium patens
Pp3c5_13510 Physcomitrium patens
PRCOL_00001864 Prasinoderma coloniale
PRCOL_00003789 Prasinoderma coloniale
Prupe.1G438400 Prunus persica
Prupe.1G438600 Prunus persica
Prupe.3G111800 Prunus persica
Psat0s3123g0080 Pisum sativum
Psat3g152440 Pisum sativum
Psat5g230280 Pisum sativum
Psat6g012640 Pisum sativum
Psat7g173600 Pisum sativum
Psat7g222680 Pisum sativum
PSO170G0070 Papaver somniferum
PSO210G1636 Papaver somniferum
PSO339G5974 Papaver somniferum
PSO541G4087 Papaver somniferum
PSO675G6562 Papaver somniferum
PSO801G0348 Papaver somniferum
QL02p005375 Quercus lobata
QL02p005379 Quercus lobata
QL02p005396 Quercus lobata
RcHm_v2.0_Chr6g0258511 Rosa chinensis
RcHm_v2.0_Chr6g0307451 Rosa chinensis
RcHm_v2.0_Chr6g0307521 Rosa chinensis
RcHm_v2.0_Chr6g0307681 Rosa chinensis
RcHm_v2.0_Chr7g0208301 Rosa chinensis
Rhsim06G0048300 Rhododendron simsii
Sabra02G0100000 Salix brachista
Sabra14G0022500 Salix brachista
SalBow3G3013 Salvia bowleyana
SalBow7G3772 Salvia bowleyana
Sc02g0007040 Simmondsia chinensis
Sc19g0008280 Simmondsia chinensis
Sed0003893 Sechium edule
Sed0011304 Sechium edule
Sed0021207 Sechium edule
SEGI_04975 Sequoiadendron giganteum
SEGI_28946 Sequoiadendron giganteum
SEGI_41572 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07034 Striga asiatica
SGA_v2.0_scaffold168G38534 Striga asiatica
SGA_v2.0_scaffold208G41999 Striga asiatica
SGA_v2.0_scaffold62G21581 Striga asiatica
SHI08293 Sapria himalayana
SMO144G0051 Selaginella moellendorffii
SMO271G0025 Selaginella moellendorffii
SMO271G0137 Selaginella moellendorffii
SMO308G0045 Selaginella moellendorffii
Solyc04g079160.4 Solanum lycopersicum
Sopen04g032770 Solanum pennellii
Sopen07g013400 Solanum pennellii
Sopen12g030780 Solanum pennellii
Sp6g07290 Schrenkiella parvula
Sp7g31080 Schrenkiella parvula
SpUn0121_0020 Schrenkiella parvula
TAR381G0883 Trochodendron aralioides
TAR381G1315 Trochodendron aralioides
TAR625G1123 Trochodendron aralioides
THA.LOC104802577 Tarenaya hassleriana
THA.LOC104803681 Tarenaya hassleriana
Thecc.08G010900 Theobroma cacao
Thecc.08G011000 Theobroma cacao
Thhalv10025691m.g Eutrema salsugineum
Thhalv10029407m.g Eutrema salsugineum
TPR.G13687 Trifolium pratense
TPR.G32346 Trifolium pratense
TPR.G35873 Trifolium pratense
TWI36G1154 Tripterygium wilfordii
TWI56G0490 Tripterygium wilfordii
TWI56G0989 Tripterygium wilfordii
unitig_19.g30010 Utricularia gibba
unitig_61.g26339 Utricularia gibba
unitig_8.g5018 Utricularia gibba
vmacro21537 Vaccinium macrocarpon
VMungo0647G0899 Vigna mungo
VMungo1127G1488 Vigna mungo
VMungo1309G0516 Vigna mungo
Zm00001eb193740 Zea mays
Zm00001eb193750 Zea mays
Zm00001eb228380 Zea mays
Zm00001eb255700 Zea mays
Zm00001eb279800 Zea mays
Zm00001eb288960 Zea mays
Zm00001eb315040 Zea mays
Zm00001eb373130 Zea mays

User provided reference genes

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