Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37830 Brassica napus
A06p38670 Brassica napus
A07p28960 Brassica napus
A07p28970 Brassica napus
A07p40800 Brassica napus
A10p09500 Brassica napus
Aa31LG4G5430 Aethionema arabicum
Aa31sc279G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1377 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.1002 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.399 Anthoceros agrestis
Actinidia01068 Actinidia chinensis
Actinidia01069 Actinidia chinensis
Actinidia18512 Actinidia chinensis
Actinidia29822 Actinidia chinensis
Actinidia38005 Actinidia chinensis
AL2G35120 Arabidopsis lyrata
AL8G22200 Arabidopsis lyrata
Aqoxy2G02499 Aquilegia oxysepala
Aqoxy5G01636 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06DG1T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.370KX3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6YLD65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.80GNXC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GJZ8MD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YL0Q9N Arachis hypogaea
AT1G75210 Arabidopsis thaliana
AT5G48960 Arabidopsis thaliana
ATR0733G055 Amborella trichopoda
ATR0796G082 Amborella trichopoda
Atru.chr13.465 Acer truncatum
Atru.chr4.3168 Acer truncatum
AUR62002541 Chenopodium quinoa
AUR62023651 Chenopodium quinoa
AUR62038819 Chenopodium quinoa
AUR62043705 Chenopodium quinoa
AUR62043706 Chenopodium quinoa
BcaB02g07016 Brassica carinata
BcaB07g34209 Brassica carinata
BcaC01g02070 Brassica carinata
BcaC03g17690 Brassica carinata
BcaC06g30737 Brassica carinata
BcaC08g45591 Brassica carinata
BcaC08g45592 Brassica carinata
BcaC08g46066 Brassica carinata
BolC2t11769H Brassica oleracea
BolC6t38397H Brassica oleracea
BolC6t39952H Brassica oleracea
BolC7t44483H Brassica oleracea
BraA02t08765Z Brassica rapa
BraA06t26781Z Brassica rapa
BraA07t30538Z Brassica rapa
BraA07t31622Z Brassica rapa
BraA10t43025Z Brassica rapa
C02p56990 Brassica napus
C06p32730 Brassica napus
C06p32740 Brassica napus
C06p39650 Brassica napus
C06p49190 Brassica napus
C07p39590 Brassica napus
CAN.G1226.21 Capsicum annuum
CAN.G3901.1 Capsicum annuum
CAN.G484.113 Capsicum annuum
CAN.G484.114 Capsicum annuum
CANSAT25G0183 Cannabis sativa
CANSAT78G1398 Cannabis sativa
CARHR068540 Cardamine hirsuta
CARHR284570 Cardamine hirsuta
Carub.0002s2203 Capsella rubella
Carub.0008s0871 Capsella rubella
Ca_05955_v3 Cicer arietinum L.
Ca_13372_v3 Cicer arietinum L.
Ca_15513_v3 Cicer arietinum L.
Ca_21373_v3 Cicer arietinum L.
CBR_g36889 Chara braunii
CBR_g36890 Chara braunii
CBR_g4376 Chara braunii
Cc03_g00070 Coffea canephora
Cc10_g02830 Coffea canephora
CDE01G0519 Ceratophyllum demersum
CDE02G3170 Ceratophyllum demersum
CDE08G0343 Ceratophyllum demersum
Cfa015737 Carpinus fangiana
Cfa018155 Carpinus fangiana
Ciclev10000800m.g Citrus clementina
Ciclev10004546m.g Citrus clementina
CiPaw.01G128500 Carya illinoinensis
CiPaw.02G068900 Carya illinoinensis
CiPaw.15G078500 Carya illinoinensis
CiPaw.15G078600 Carya illinoinensis
CiPaw.16G058900 Carya illinoinensis
ClCG06G004150 Citrullus lanatus
ClCG08G015070 Citrullus lanatus
COL.COLO4_26310 Corchorus olitorius
COL.COLO4_34508 Corchorus olitorius
Cpa.g.sc146.15 Carica papaya
Cpa.g.sc36.81 Carica papaya
Cre10.g456900 Chlamydomonas reinhardtii
Cre13.g573150 Chlamydomonas reinhardtii
CsaV3_2G028720 Cucumis sativus L.
CsaV3_6G000280 Cucumis sativus L.
CSS0002469 Camellia sinensis var. sinensis
CSS0040518 Camellia sinensis var. sinensis
CSS0042626 Camellia sinensis var. sinensis
CSS0046649 Camellia sinensis var. sinensis
DCAR_013820 Daucus carota
DCAR_023413 Daucus carota
Dinv01476 Davidia involucrata
Dinv29498 Davidia involucrata
Dinv29499 Davidia involucrata
Dinv36086 Davidia involucrata
Duzib093G2094 Durio zibethinus
Duzib116G0196 Durio zibethinus
Duzib212G0591 Durio zibethinus
ECA246G1239 Erigeron canadensis
ECA246G4720 Erigeron canadensis
ECA247G0066 Erigeron canadensis
EL10Ac1g01756 Beta vulgaris
EL10Ac3g06236 Beta vulgaris
Eucgr.F01892 Eucalyptus grandis
Eucgr.H04128 Eucalyptus grandis
FAN07G0083 Fragaria x ananassa
FAN12G0996 Fragaria x ananassa
FAN15G1126 Fragaria x ananassa
FAN17G1215 Fragaria x ananassa
FAN20G1956 Fragaria x ananassa
FAN27G0602 Fragaria x ananassa
FvH4_2g39770 Fragaria vesca
FvH4_4g21590 Fragaria vesca
Glyma.04G031800 Glycine max
Glyma.06G031900 Glycine max
Glyma.09G079500 Glycine max
Glyma.13G119100 Glycine max
Glyma.14G074800 Glycine max
Glyma.15G187000 Glycine max
Glyma.17G041100 Glycine max
Glyma.17G250700 Glycine max
Gohir.A02G059000 Gossypium hirsutum
Gohir.A05G193700 Gossypium hirsutum
Gohir.A06G010100 Gossypium hirsutum
Gohir.D02G064700 Gossypium hirsutum
Gohir.D05G196832 Gossypium hirsutum
Gohir.D05G196900 Gossypium hirsutum
Gohir.D06G007500 Gossypium hirsutum
Gohir.D08G089800 Gossypium hirsutum
Gohir.D12G087100 Gossypium hirsutum
Gorai.004G094700 Gossypium raimondii
Gorai.005G073300 Gossypium raimondii
Gorai.008G097300 Gossypium raimondii
Gorai.009G201800 Gossypium raimondii
Gorai.010G010200 Gossypium raimondii
GSVIVG01009713001 Vitis vinifera
GSVIVG01017695001 Vitis vinifera
HanXRQChr02g0039761 Helianthus annuus
HanXRQChr04g0105681 Helianthus annuus
HanXRQChr04g0105691 Helianthus annuus
HanXRQChr05g0148981 Helianthus annuus
HanXRQChr05g0153601 Helianthus annuus
Haze_00759 Corylus avellana
Haze_17963 Corylus avellana
Haze_26941 Corylus avellana
Hma1.2p1_0203F.1_g086340 Hydrangea macrophylla
Hma1.2p1_1449F.1_g284065 Hydrangea macrophylla
Hma1.2p1_2234F.1_g317640 Hydrangea macrophylla
HPP92_001181 Vanilla planifolia
HPP92_017684 Vanilla planifolia
HPP92_017685 Vanilla planifolia
HPP92_017751 Vanilla planifolia
Hund22644 Selenicereus undatus
Hund26570 Selenicereus undatus
Lalb_Chr07g0181631 Lupinus albus
Lalb_Chr08g0245871 Lupinus albus
Lalb_Chr11g0062311 Lupinus albus
Lalb_Chr12g0200551 Lupinus albus
Lj1g0019872 Lotus japonicus
Lj4C786T3 Lonicera japonica
Lj4g0022953 Lotus japonicus
Lj6A702G44 Lonicera japonica
Lj6A702T45 Lonicera japonica
Lsat_1_v5_gn_0_33321 Lactuca sativa
Lsat_1_v5_gn_1_18740 Lactuca sativa
Lsat_1_v5_gn_3_136841 Lactuca sativa
Lsat_1_v5_gn_4_9621 Lactuca sativa
Lsat_1_v5_gn_5_27540 Lactuca sativa
Lsat_1_v5_gn_6_118301 Lactuca sativa
Manes.03G212300 Manihot esculenta
Manes.05G159400 Manihot esculenta
Manes.18G026700 Manihot esculenta
Mapoly0044s0089 Marchantia polymorpha
Mapoly0091s0018 Marchantia polymorpha
MBI16_g28726_MAGBIO Magnolia biondii
MBI16_g31223_MAGBIO Magnolia biondii
MBI18_g10381_MAGBIO Magnolia biondii
MCO02G255 Micromonas commoda
MD02G1230500 Malus domestica
MD08G1031400 Malus domestica
MD09G1046400 Malus domestica
MD09G1268400 Malus domestica
MD10G1049200 Malus domestica
MD10G1049300 Malus domestica
MD13G1140600 Malus domestica
MD15G1027200 Malus domestica
MD16G1135200 Malus domestica
Medtr1g022260 Medicago truncatula
Medtr3g111870 Medicago truncatula
Medtr4g123980 Medicago truncatula
Medtr5g082530 Medicago truncatula
MELO3C010944.2 Cucumis melo
MELO3C021226.2 Cucumis melo
Migut.C00318 Erythranthe guttata
Migut.C00738 Erythranthe guttata
Migut.G00901 Erythranthe guttata
MSTRG.10185 Avicennia marina
MSTRG.1275 Avicennia marina
Nitab4.5_0000978g0080 Nicotiana tabacum
Nitab4.5_0002224g0010 Nicotiana tabacum
Nitab4.5_0002224g0020 Nicotiana tabacum
Nitab4.5_0002466g0050 Nicotiana tabacum
Nitab4.5_0004186g0030 Nicotiana tabacum
Nn1g04982 Nelumbo nucifera
Nn4g25366 Nelumbo nucifera
Nn5g29609 Nelumbo nucifera
Oeu002202.1 Olea europaea
Oeu007019.3 Olea europaea
Oeu063755.1 Olea europaea
Os01g0250900 Oryza sativa ssp. japonica
Os03g0774300 Oryza sativa ssp. japonica
Os12g0180600 Oryza sativa ssp. japonica
Peaxi162Scf00323g00822 Petunia axillaris
Peaxi162Scf00931g00119 Petunia axillaris
PGR004G1753 Punica granatum
PGR031G1345 Punica granatum
PGR083G1162 Punica granatum
PGSC0003DMG400003681 Solanum tuberosum
Phvul.003G122300 Phaseolus vulgaris
Phvul.009G058000 Phaseolus vulgaris
Phvul.009G220400 Phaseolus vulgaris
Potri.008G205900 Populus trichocarpa
Potri.010G002900 Populus trichocarpa
Potri.014G196700 Populus trichocarpa
Pp3c14_2770 Physcomitrium patens
Pp3c1_23010 Physcomitrium patens
Pp3c3_29260 Physcomitrium patens
Pp3c8_7530 Physcomitrium patens
PRCOL_00001743 Prasinoderma coloniale
Prupe.1G104000 Prunus persica
Prupe.1G104500 Prunus persica
Prupe.1G379000 Prunus persica
Psat2g033440 Pisum sativum
Psat4g021200 Pisum sativum
Psat5g017080 Pisum sativum
Psat6g008960 Pisum sativum
PSO210G1155 Papaver somniferum
PSO210G7256 Papaver somniferum
PSO731G0029 Papaver somniferum
PSO761G0176 Papaver somniferum
QL02p008697 Quercus lobata
QL06p014379 Quercus lobata
QL06p014383 Quercus lobata
RcHm_v2.0_Chr4g0427701 Rosa chinensis
RcHm_v2.0_Chr6g0301091 Rosa chinensis
Rhsim04G0249000 Rhododendron simsii
Rhsim04G0249600 Rhododendron simsii
Rhsim07G0239800 Rhododendron simsii
Sabra08G0149600 Salix brachista
Sabra10G0002300 Salix brachista
Sabra14G0145500 Salix brachista
SalBow7G2615 Salvia bowleyana
SalBow8G0113 Salvia bowleyana
SalBow8G4005 Salvia bowleyana
Sc13g0008020 Simmondsia chinensis
Sc13g0008030 Simmondsia chinensis
Sc15g0006940 Simmondsia chinensis
Sed0009494 Sechium edule
Sed0014237 Sechium edule
Sed0019064 Sechium edule
SEGI_14302 Sequoiadendron giganteum
SEGI_27952 Sequoiadendron giganteum
SEGI_40543 Sequoiadendron giganteum
SGA_v2.0_scaffold157G37393 Striga asiatica
SGA_v2.0_scaffold54G19516 Striga asiatica
SHI08155 Sapria himalayana
SMO118G0340 Selaginella moellendorffii
SMO356G0200 Selaginella moellendorffii
SMO364G0546 Selaginella moellendorffii
Solyc04g080430.3 Solanum lycopersicum
Solyc12g098830.2 Solanum lycopersicum
Sopen04g034010 Solanum pennellii
Sopen12g033570 Solanum pennellii
Sp2g19340 Schrenkiella parvula
Sp5g30370 Schrenkiella parvula
TAR376G0025 Trochodendron aralioides
TAR628G0626 Trochodendron aralioides
TAR628G1066 Trochodendron aralioides
TAR633G1005 Trochodendron aralioides
THA.LOC104813834 Tarenaya hassleriana
THA.LOC104818932 Tarenaya hassleriana
THA.LOC104827346 Tarenaya hassleriana
Thecc.04G313900 Theobroma cacao
Thecc.08G027200 Theobroma cacao
Thecc.09G193400 Theobroma cacao
Thhalv10003802m.g Eutrema salsugineum
Thhalv10018265m.g Eutrema salsugineum
TPR.G12478 Trifolium pratense
TPR.G12594 Trifolium pratense
TPR.G20153 Trifolium pratense
TPR.G35016 Trifolium pratense
TWI12G1471 Tripterygium wilfordii
unitig_26.g9835 Utricularia gibba
unitig_749.g13848 Utricularia gibba
vmacro04530 Vaccinium macrocarpon
vmacro08015 Vaccinium macrocarpon
VMungo1215G0636 Vigna mungo
VMungo1309G2350 Vigna mungo
VMungo1309G2400 Vigna mungo
Zm00001eb059100 Zea mays
Zm00001eb333800 Zea mays
Zm00001eb333810 Zea mays

User provided reference genes

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