Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p11710 Brassica napus
A07p00150 Brassica napus
A08p25610 Brassica napus
A09p37650 Brassica napus
A09p58820 Brassica napus
Aa31LG6G10340 Aethionema arabicum
Aa31LG8G17490 Aethionema arabicum
Aa31LG9G13740 Aethionema arabicum
Actinidia16569 Actinidia chinensis
Actinidia26140 Actinidia chinensis
Actinidia39327 Actinidia chinensis
Ah.01g004050 Amaranthus hybridus
AL1G42020 Arabidopsis lyrata
AL3G53640 Arabidopsis lyrata
AL4G29640 Arabidopsis lyrata
Aqoxy1G02309 Aquilegia oxysepala
Aqoxy4G00647 Aquilegia oxysepala
Aqoxy4G00652 Aquilegia oxysepala
Aqoxy4G00667 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1N9QNC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.252E8Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2NH087 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.528IQ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.961YNL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DUMN8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G0WLQA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JHM90T Arachis hypogaea
AT1G28395 Arabidopsis thaliana
AT2G20585 Arabidopsis thaliana
AT2G33847 Arabidopsis thaliana
Atru.chr10.1805 Acer truncatum
Atru.chr6.2877 Acer truncatum
AUR62014863 Chenopodium quinoa
AUR62031069 Chenopodium quinoa
AUR62036051 Chenopodium quinoa
AUR62038983 Chenopodium quinoa
BcaB02g10600 Brassica carinata
BcaB03g12107 Brassica carinata
BcaB03g16855 Brassica carinata
BcaB07g32461 Brassica carinata
BcaB08g34918 Brassica carinata
BcaC01g00046 Brassica carinata
BcaC02g08757 Brassica carinata
BcaC02g11464 Brassica carinata
BcaC05g26858 Brassica carinata
BcaC06g36751 Brassica carinata
BcaC07g41205 Brassica carinata
BcaC08g43444 Brassica carinata
BolC3t19767H Brassica oleracea
BolC4t23091H Brassica oleracea
BolC5t31453H Brassica oleracea
BolC7t40488H Brassica oleracea
BolC8t51774H Brassica oleracea
BraA05t20116Z Brassica rapa
BraA07t27809Z Brassica rapa
BraA08t34511Z Brassica rapa
BraA09t39275Z Brassica rapa
BraA09t41268Z Brassica rapa
C03p75100 Brassica napus
C04p15160 Brassica napus
C07p00400 Brassica napus
C08p42140 Brassica napus
CAN.G209.7 Capsicum annuum
CANSAT64G3013 Cannabis sativa
CARHR027900 Cardamine hirsuta
CARHR111160 Cardamine hirsuta
CARHR127980 Cardamine hirsuta
Carub.0001s2687 Capsella rubella
Carub.0003s3507 Capsella rubella
Carub.0004s1554 Capsella rubella
Ca_00357_v3 Cicer arietinum L.
Ca_01484_v3 Cicer arietinum L.
Ca_18923_v3 Cicer arietinum L.
Ca_29530_v3 Cicer arietinum L.
Cc00_g19280 Coffea canephora
Cc02_g13750 Coffea canephora
Cc02_g13760 Coffea canephora
Cc02_g13770 Coffea canephora
Cc04_g09010 Coffea canephora
Cc05_g07650 Coffea canephora
Cc05_g07660 Coffea canephora
CDE10G1106 Ceratophyllum demersum
Cfa000522 Carpinus fangiana
Ciclev10017075m.g Citrus clementina
Ciclev10017238m.g Citrus clementina
CiPaw.09G063100 Carya illinoinensis
CiPaw.10G052200 Carya illinoinensis
ClCG01G023210 Citrullus lanatus
ClCG02G002380 Citrullus lanatus
ClCG02G009690 Citrullus lanatus
COL.COLO4_18048 Corchorus olitorius
COL.COLO4_31423 Corchorus olitorius
Cpa.g.sc27.10 Carica papaya
Cpa.g.sc83.86 Carica papaya
CsaV3_2G034370 Cucumis sativus L.
CsaV3_2G034390 Cucumis sativus L.
CsaV3_2G034400 Cucumis sativus L.
CsaV3_5G038050 Cucumis sativus L.
CsaV3_6G050360 Cucumis sativus L.
CSS0015244 Camellia sinensis var. sinensis
CSS0017392 Camellia sinensis var. sinensis
DCAR_004050 Daucus carota
DCAR_008008 Daucus carota
DCAR_021261 Daucus carota
Dinv06863 Davidia involucrata
Dinv10163 Davidia involucrata
Dinv17349 Davidia involucrata
Duzib052G0085 Durio zibethinus
Duzib132G0588 Durio zibethinus
Duzib192G0619 Durio zibethinus
ECA234G0158 Erigeron canadensis
ECA238G3683 Erigeron canadensis
ECA246G5121 Erigeron canadensis
ECA248G0199 Erigeron canadensis
ECA248G2746 Erigeron canadensis
EL10Ac8g20431 Beta vulgaris
EL10Ac9g20809 Beta vulgaris
EL10Ac9g20810 Beta vulgaris
Eucgr.D00599 Eucalyptus grandis
Eucgr.K01049 Eucalyptus grandis
FAN08G0686 Fragaria x ananassa
FAN08G1636 Fragaria x ananassa
FAN11G0921 Fragaria x ananassa
FAN11G3081 Fragaria x ananassa
FAN11G3551 Fragaria x ananassa
FAN16G1464 Fragaria x ananassa
FAN16G2242 Fragaria x ananassa
FAN17G1588 Fragaria x ananassa
FAN18G2905 Fragaria x ananassa
FAN21G3816 Fragaria x ananassa
FvH4_3g02420 Fragaria vesca
FvH4_3g08700 Fragaria vesca
FvH4_3g43343 Fragaria vesca
FvH4_5g21460 Fragaria vesca
Glyma.06G289500 Glycine max
Glyma.12G117500 Glycine max
Glyma.12G206300 Glycine max
Glyma.13G236300 Glycine max
Glyma.13G294600 Glycine max
Glyma.15G077400 Glycine max
Glyma.15G167666 Glycine max
Gohir.A03G154900 Gossypium hirsutum
Gohir.A10G027700 Gossypium hirsutum
Gohir.D02G177900 Gossypium hirsutum
Gohir.D10G028100 Gossypium hirsutum
Gorai.005G199700 Gossypium raimondii
Gorai.011G029900 Gossypium raimondii
GSVIVG01020598001 Vitis vinifera
GSVIVG01021106001 Vitis vinifera
HanXRQChr01g0003851 Helianthus annuus
HanXRQChr01g0014411 Helianthus annuus
HanXRQChr01g0027921 Helianthus annuus
HanXRQChr02g0052161 Helianthus annuus
HanXRQChr03g0093701 Helianthus annuus
HanXRQChr08g0221051 Helianthus annuus
HanXRQChr13g0399871 Helianthus annuus
HanXRQChr17g0541751 Helianthus annuus
HanXRQChr17g0554581 Helianthus annuus
Haze_06388 Corylus avellana
Haze_13233 Corylus avellana
Haze_13234 Corylus avellana
Hma1.2p1_0558F.1_g178560 Hydrangea macrophylla
HPP92_020292 Vanilla planifolia
HPP92_021317 Vanilla planifolia
Hund01047 Selenicereus undatus
Hund07914 Selenicereus undatus
Hund23804 Selenicereus undatus
Lalb_Chr01g0005101 Lupinus albus
Lalb_Chr09g0327831 Lupinus albus
Lalb_Chr16g0383981 Lupinus albus
Lalb_Chr19g0135121 Lupinus albus
Lalb_Chr22g0356711 Lupinus albus
Lalb_Chr24g0399981 Lupinus albus
Lj3g0015483 Lotus japonicus
Lj3g0025541 Lotus japonicus
Lj6g0006336 Lotus japonicus
Lj8A108T63 Lonicera japonica
Lsat_1_v5_gn_1_121360 Lactuca sativa
Lsat_1_v5_gn_1_53200 Lactuca sativa
Lsat_1_v5_gn_3_38841 Lactuca sativa
Lsat_1_v5_gn_4_51900 Lactuca sativa
Lsat_1_v5_gn_6_31181 Lactuca sativa
Lsat_1_v5_gn_8_133740 Lactuca sativa
Manes.13G142700 Manihot esculenta
Manes.16G031200 Manihot esculenta
Manes.17G048800 Manihot esculenta
MBI07_g07814_MAGBIO Magnolia biondii
MBI07_g29115_MAGBIO Magnolia biondii
MD05G1310800 Malus domestica
MD10G1289900 Malus domestica
Medtr2g014370 Medicago truncatula
Medtr2g090650 Medicago truncatula
Medtr4g078770 Medicago truncatula
MELO3C021989.2 Cucumis melo
MELO3C032511.2 Cucumis melo
MELO3C032902.2 Cucumis melo
MELO3C034712.2 Cucumis melo
Migut.B01464 Erythranthe guttata
Migut.H01474 Erythranthe guttata
Migut.M01112 Erythranthe guttata
MSTRG.14328 Avicennia marina
Nitab4.5_0000516g0100 Nicotiana tabacum
Nitab4.5_0001375g0170 Nicotiana tabacum
Nitab4.5_0002773g0030 Nicotiana tabacum
Nitab4.5_0002813g0070 Nicotiana tabacum
Nitab4.5_0003076g0020 Nicotiana tabacum
Nitab4.5_0003219g0020 Nicotiana tabacum
Nitab4.5_0005260g0020 Nicotiana tabacum
Nitab4.5_0006815g0050 Nicotiana tabacum
Nitab4.5_0007893g0040 Nicotiana tabacum
Nitab4.5_0008993g0040 Nicotiana tabacum
Nn1g09648 Nelumbo nucifera
Nn3g18204 Nelumbo nucifera
Nn4g24122 Nelumbo nucifera
Oeu012150.1 Olea europaea
Oeu014776.1 Olea europaea
Oeu033606.1 Olea europaea
Oeu045604.1 Olea europaea
Os01g0238800 Oryza sativa ssp. japonica
Os01g0754000 Oryza sativa ssp. japonica
Peaxi162Scf00031g00822 Petunia axillaris
Peaxi162Scf00461g01118 Petunia axillaris
Peaxi162Scf00845g00232 Petunia axillaris
Peaxi162Scf00926g00514 Petunia axillaris
PGR042G3216 Punica granatum
PGSC0003DMG400009394 Solanum tuberosum
PGSC0003DMG400012829 Solanum tuberosum
PGSC0003DMG400022808 Solanum tuberosum
PGSC0003DMG400031762 Solanum tuberosum
Phvul.005G101000 Phaseolus vulgaris
Phvul.006G182900 Phaseolus vulgaris
Phvul.011G124500 Phaseolus vulgaris
Potri.004G048100 Populus trichocarpa
Potri.007G137500 Populus trichocarpa
Potri.011G057300 Populus trichocarpa
Potri.017G014500 Populus trichocarpa
Prupe.3G134600 Prunus persica
Prupe.4G051800 Prunus persica
Psat1g203200 Pisum sativum
Psat5g273560 Pisum sativum
Psat7g168080 Pisum sativum
PSO541G0554 Papaver somniferum
PSO832G1794 Papaver somniferum
QL05p042066 Quercus lobata
QL08p040000 Quercus lobata
RcHm_v2.0_Chr2g0127311 Rosa chinensis
RcHm_v2.0_Chr5g0009081 Rosa chinensis
RcHm_v2.0_Chr7g0223421 Rosa chinensis
RcHm_v2.0_Chr7g0223571 Rosa chinensis
Rhsim02G0133900 Rhododendron simsii
Rhsim04G0070900 Rhododendron simsii
Rhsim06G0138100 Rhododendron simsii
Sabra07G0110400 Salix brachista
Sabra11G0039200 Salix brachista
Sabra17G0011700 Salix brachista
SalBow2G1184 Salvia bowleyana
SalBow5G1784 Salvia bowleyana
SalBow6G7240 Salvia bowleyana
SalBow7G1714 Salvia bowleyana
SalBow7G2518 Salvia bowleyana
SalBow7G3336 Salvia bowleyana
SalBow7G3819 Salvia bowleyana
SalBow8G0028 Salvia bowleyana
SalBow8G3934 Salvia bowleyana
Sc05g0007470 Simmondsia chinensis
Sc07g0007130 Simmondsia chinensis
Sc17g0005970 Simmondsia chinensis
Sc21g0003160 Simmondsia chinensis
Sed0006600 Sechium edule
Sed0010495 Sechium edule
Sed0011525 Sechium edule
Sed0023730 Sechium edule
SGA_v2.0_scaffold100G29713 Striga asiatica
SGA_v2.0_scaffold22G09673 Striga asiatica
SGA_v2.0_scaffold34G13926 Striga asiatica
SGA_v2.0_scaffold70G23497 Striga asiatica
Solyc02g077730.3 Solanum lycopersicum
Solyc07g053670.3 Solanum lycopersicum
Solyc10g009130.4 Solanum lycopersicum
Sopen02g022620 Solanum pennellii
Sopen03g002320 Solanum pennellii
Sopen07g027640 Solanum pennellii
Sopen10g004910 Solanum pennellii
Sp1g24670 Schrenkiella parvula
Sp3g33830 Schrenkiella parvula
Sp4g16250 Schrenkiella parvula
TAR624G0411 Trochodendron aralioides
TAR624G0503 Trochodendron aralioides
TAR626G1951 Trochodendron aralioides
THA.LOC104814228 Tarenaya hassleriana
Thecc.02G185200 Theobroma cacao
Thecc.06G072900 Theobroma cacao
Thecc.06G181700 Theobroma cacao
Thhalv10002135m.g Eutrema salsugineum
Thhalv10009195m.g Eutrema salsugineum
Thhalv10017477m.g Eutrema salsugineum
TPR.G6482 Trifolium pratense
TWI23G0384 Tripterygium wilfordii
TWI56G0819 Tripterygium wilfordii
TWI59G0581 Tripterygium wilfordii
TWI59G0683 Tripterygium wilfordii
TWI59G1014 Tripterygium wilfordii
TWI59G1280 Tripterygium wilfordii
TWI59G1309 Tripterygium wilfordii
TWI59G1354 Tripterygium wilfordii
unitig_21.g20216 Utricularia gibba
unitig_22.g6220 Utricularia gibba
unitig_22.g6749 Utricularia gibba
unitig_61.g26089 Utricularia gibba
unitig_744.g24537 Utricularia gibba
unitig_746.g26675 Utricularia gibba
unitig_8.g3361 Utricularia gibba
unitig_899.g15319 Utricularia gibba
vmacro09248 Vaccinium macrocarpon
vmacro12339 Vaccinium macrocarpon
vmacro15927 Vaccinium macrocarpon
VMungo0540G0400 Vigna mungo
VMungo1080G1707 Vigna mungo
Zm00001eb118910 Zea mays

User provided reference genes

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