Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p32190 Brassica napus
A04p01130 Brassica napus
A04p34120 Brassica napus
A05p05870 Brassica napus
A09p00480 Brassica napus
A09p53430 Brassica napus
Aa31LG10G15550 Aethionema arabicum
Aa31LG1G11040 Aethionema arabicum
Aa31LG1G27340 Aethionema arabicum
Aa31LG5G540 Aethionema arabicum
Actinidia10009 Actinidia chinensis
Actinidia12703 Actinidia chinensis
Actinidia20902 Actinidia chinensis
Actinidia33419 Actinidia chinensis
Actinidia33420 Actinidia chinensis
Ah.05g180600 Amaranthus hybridus
AL1G10670 Arabidopsis lyrata
AL4G45110 Arabidopsis lyrata
AL5G43660 Arabidopsis lyrata
AL6G53020 Arabidopsis lyrata
Aqoxy7G00305 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7UV203 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H5386A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q9SV2L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5HRAC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XE9T79 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XVC037 Arachis hypogaea
AT1G01695 Arabidopsis thaliana
AT2G45900 Arabidopsis thaliana
AT3G61380 Arabidopsis thaliana
AT4G00440 Arabidopsis thaliana
ATR0680G229 Amborella trichopoda
Atru.chr5.499 Acer truncatum
Atru.chr9.2180 Acer truncatum
AUR62004359 Chenopodium quinoa
AUR62022567 Chenopodium quinoa
BcaB01g02165 Brassica carinata
BcaB01g02250 Brassica carinata
BcaC01g06880 Brassica carinata
BcaC02g07066 Brassica carinata
BcaC02g10221 Brassica carinata
BcaC02g12169 Brassica carinata
BcaC04g24170 Brassica carinata
BcaC04g24174 Brassica carinata
BcaC07g40635 Brassica carinata
BcaC09g52247 Brassica carinata
BcaC09g52248 Brassica carinata
BcaNung04553 Brassica carinata
BcaNung07022 Brassica carinata
BolC3t16193H Brassica oleracea
BolC4t22303H Brassica oleracea
BolC4t24685H Brassica oleracea
BolC4t28690H Brassica oleracea
BolC8t51206H Brassica oleracea
BolC8t52896H Brassica oleracea
BolC9t52973H Brassica oleracea
BraA03t12389Z Brassica rapa
BraA04t15829Z Brassica rapa
BraA04t18873Z Brassica rapa
BraA05t19551Z Brassica rapa
BraA09t35712Z Brassica rapa
BraA09t40769Z Brassica rapa
BraA09t42259Z Brassica rapa
C03p39220 Brassica napus
C04p06810 Brassica napus
C04p31360 Brassica napus
C04p71920 Brassica napus
C08p36240 Brassica napus
C08p53820 Brassica napus
C09p00380 Brassica napus
CANSAT21G1957 Cannabis sativa
CANSAT56G1625 Cannabis sativa
CANSAT56G4299 Cannabis sativa
CARHR141180 Cardamine hirsuta
CARHR148180 Cardamine hirsuta
CARHR171720 Cardamine hirsuta
CARHR248540 Cardamine hirsuta
Carub.0001s0052 Capsella rubella
Carub.0004s2860 Capsella rubella
Carub.0005s2805 Capsella rubella
Carub.0006s3682 Capsella rubella
Ca_07921_v3 Cicer arietinum L.
Ca_17526_v3 Cicer arietinum L.
Ca_23632_v3 Cicer arietinum L.
Cc02_g38040 Coffea canephora
Cc08_g14810 Coffea canephora
Cfa003924 Carpinus fangiana
Cfa012223 Carpinus fangiana
Ciclev10018716m.g Citrus clementina
Ciclev10018878m.g Citrus clementina
CiPaw.01G061400 Carya illinoinensis
CiPaw.02G031000 Carya illinoinensis
CiPaw.11G134400 Carya illinoinensis
ClCG01G002640 Citrullus lanatus
ClCG05G001520 Citrullus lanatus
COL.COLO4_20185 Corchorus olitorius
COL.COLO4_34473 Corchorus olitorius
Cpa.g.sc11.4 Carica papaya
Cpa.g.sc11.5 Carica papaya
Cpa.g.sc74.55 Carica papaya
CsaV3_3G008900 Cucumis sativus L.
CsaV3_5G002760 Cucumis sativus L.
CSS0003251 Camellia sinensis var. sinensis
CSS0011549 Camellia sinensis var. sinensis
DCAR_000349 Daucus carota
DCAR_004631 Daucus carota
DCAR_006930 Daucus carota
DCAR_008398 Daucus carota
DCAR_015992 Daucus carota
Dinv32485 Davidia involucrata
Dinv37634 Davidia involucrata
Dinv43817 Davidia involucrata
Dinv43818 Davidia involucrata
Duzib068G0569 Durio zibethinus
Duzib084G0248 Durio zibethinus
Duzib205G1702 Durio zibethinus
Duzib212G0601 Durio zibethinus
Duzib268G0073 Durio zibethinus
ECA233G2710 Erigeron canadensis
ECA234G4153 Erigeron canadensis
ECA236G0021 Erigeron canadensis
EL10Ac1g00415 Beta vulgaris
Eucgr.D02291 Eucalyptus grandis
Eucgr.E00135 Eucalyptus grandis
Eucgr.E00627 Eucalyptus grandis
FAN01G1477 Fragaria x ananassa
FAN03G3385 Fragaria x ananassa
FAN04G2070 Fragaria x ananassa
FAN06G2330 Fragaria x ananassa
FAN06G4139 Fragaria x ananassa
FAN08G0625 Fragaria x ananassa
FAN10G2557 Fragaria x ananassa
FAN10G2676 Fragaria x ananassa
FAN13G1469 Fragaria x ananassa
FAN18G2062 Fragaria x ananassa
FvH4_5g02600 Fragaria vesca
FvH4_7g14290 Fragaria vesca
Glyma.03G009000 Glycine max
Glyma.05G208500 Glycine max
Glyma.07G070500 Glycine max
Glyma.08G015100 Glycine max
Glyma.09G259200 Glycine max
Glyma.14G155600 Glycine max
Glyma.18G233100 Glycine max
Gohir.A02G020600 Gossypium hirsutum
Gohir.A03G095500 Gossypium hirsutum
Gohir.A05G029601 Gossypium hirsutum
Gohir.A08G013780 Gossypium hirsutum
Gohir.A08G183050 Gossypium hirsutum
Gohir.A09G205900 Gossypium hirsutum
Gohir.A12G229800 Gossypium hirsutum
Gohir.D02G024600 Gossypium hirsutum
Gohir.D02G113800 Gossypium hirsutum
Gohir.D08G201600 Gossypium hirsutum
Gohir.D09G199500 Gossypium hirsutum
Gohir.D12G230900 Gossypium hirsutum
Gorai.004G212500 Gossypium raimondii
Gorai.005G030500 Gossypium raimondii
Gorai.005G129500 Gossypium raimondii
Gorai.006G223200 Gossypium raimondii
Gorai.008G247100 Gossypium raimondii
GSVIVG01019747001 Vitis vinifera
GSVIVG01026934001 Vitis vinifera
HanXRQChr02g0034491 Helianthus annuus
HanXRQChr04g0121091 Helianthus annuus
HanXRQChr06g0170011 Helianthus annuus
HanXRQChr13g0394501 Helianthus annuus
HanXRQChr16g0522751 Helianthus annuus
Haze_08787 Corylus avellana
Haze_15507 Corylus avellana
HPP92_005026 Vanilla planifolia
HPP92_014791 Vanilla planifolia
Hund16922 Selenicereus undatus
Hund27273 Selenicereus undatus
Lalb_Chr04g0256961 Lupinus albus
Lalb_Chr16g0390031 Lupinus albus
Lalb_Chr17g0339601 Lupinus albus
Lj1g0019851 Lotus japonicus
Lj3g0021962 Lotus japonicus
Lj7A512T28 Lonicera japonica
Lj9A583T65 Lonicera japonica
Lju41A47G15 Lonicera japonica
Lsat_1_v5_gn_3_137221 Lactuca sativa
Lsat_1_v5_gn_4_36100 Lactuca sativa
Lsat_1_v5_gn_6_6641 Lactuca sativa
Lsat_1_v5_gn_7_4721 Lactuca sativa
Manes.01G059400 Manihot esculenta
Manes.01G256600 Manihot esculenta
Manes.02G019700 Manihot esculenta
Manes.05G034100 Manihot esculenta
Manes.05G044766 Manihot esculenta
Manes.05G044799 Manihot esculenta
Manes.05G045900 Manihot esculenta
Manes.06G173066 Manihot esculenta
Manes.06G173132 Manihot esculenta
Manes.06G173198 Manihot esculenta
MBI17_g24689_MAGBIO Magnolia biondii
MBI18_g06450_MAGBIO Magnolia biondii
MD01G1060800 Malus domestica
MD01G1060900 Malus domestica
MD06G1085000 Malus domestica
MD07G1136900 Malus domestica
MD14G1105800 Malus domestica
Medtr7g076780 Medicago truncatula
Medtr7g077740 Medicago truncatula
Medtr7g078520 Medicago truncatula
Medtr8g030750 Medicago truncatula
Medtr8g098335 Medicago truncatula
MELO3C005681.2 Cucumis melo
MELO3C006109.2 Cucumis melo
Migut.A00735 Erythranthe guttata
Migut.B01756 Erythranthe guttata
MSTRG.11980 Avicennia marina
MSTRG.17269 Avicennia marina
MSTRG.20834 Avicennia marina
MSTRG.25617 Avicennia marina
MSTRG.4854 Avicennia marina
Nitab4.5_0000583g0100 Nicotiana tabacum
Nitab4.5_0000678g0100 Nicotiana tabacum
Nitab4.5_0001615g0070 Nicotiana tabacum
Nitab4.5_0006762g0010 Nicotiana tabacum
Nn1g01537 Nelumbo nucifera
Nn6g33418 Nelumbo nucifera
Oeu009151.1 Olea europaea
Oeu010612.1 Olea europaea
Oeu011042.2 Olea europaea
Oeu052948.3 Olea europaea
Oeu053748.1 Olea europaea
Os03g0106200 Oryza sativa ssp. japonica
Os04g0559200 Oryza sativa ssp. japonica
Os10g0550000 Oryza sativa ssp. japonica
Peaxi162Scf00020g00328 Petunia axillaris
Peaxi162Scf00119g00948 Petunia axillaris
PGR031G0369 Punica granatum
PGR042G0971 Punica granatum
PGR042G2129 Punica granatum
PGSC0003DMG400000172 Solanum tuberosum
PGSC0003DMG400012204 Solanum tuberosum
Phvul.002G290200 Phaseolus vulgaris
Phvul.008G062300 Phaseolus vulgaris
Phvul.010G099200 Phaseolus vulgaris
Potri.001G103400 Populus trichocarpa
Potri.002G160000 Populus trichocarpa
Potri.014G084600 Populus trichocarpa
Prupe.2G170700 Prunus persica
Prupe.5G101000 Prunus persica
Psat3g108320 Pisum sativum
Psat4g155680 Pisum sativum
PSO478G2816 Papaver somniferum
PSO782G2744 Papaver somniferum
QL08p048793 Quercus lobata
QL12p032830 Quercus lobata
RcHm_v2.0_Chr1g0355281 Rosa chinensis
RcHm_v2.0_Chr7g0197501 Rosa chinensis
Rhsim07G0014800 Rhododendron simsii
Rhsim07G0090300 Rhododendron simsii
Sabra01G0078100 Salix brachista
Sabra02G0127000 Salix brachista
Sabra14G0061400 Salix brachista
SalBow1G3955 Salvia bowleyana
SalBow1G5168 Salvia bowleyana
SalBow1G8374 Salvia bowleyana
SalBow3G1736 Salvia bowleyana
Sc23g0002880 Simmondsia chinensis
Sc23g0002890 Simmondsia chinensis
Sc26g0000910 Simmondsia chinensis
Sed0019968 Sechium edule
Sed0022826 Sechium edule
Sed0023491 Sechium edule
SGA_v2.0_scaffold144G35938 Striga asiatica
SGA_v2.0_scaffold144G35940 Striga asiatica
SGA_v2.0_scaffold173G39174 Striga asiatica
SGA_v2.0_scaffold479G52240 Striga asiatica
SGA_v2.0_scaffold4G02315 Striga asiatica
SGA_v2.0_scaffold95G28833 Striga asiatica
Solyc01g094640.4 Solanum lycopersicum
Solyc08g081160.3 Solanum lycopersicum
Sopen01g038450 Solanum pennellii
Sopen08g029460 Solanum pennellii
Sp1g00610 Schrenkiella parvula
Sp4g27970 Schrenkiella parvula
Sp5g02020 Schrenkiella parvula
Sp6g00480 Schrenkiella parvula
TAR375G0315 Trochodendron aralioides
TAR629G0527 Trochodendron aralioides
TAR636G0944 Trochodendron aralioides
THA.LOC104801437 Tarenaya hassleriana
THA.LOC104802034 Tarenaya hassleriana
THA.LOC104825840 Tarenaya hassleriana
Thecc.03G279700 Theobroma cacao
Thecc.04G199500 Theobroma cacao
Thhalv10001338m.g Eutrema salsugineum
Thhalv10005809m.g Eutrema salsugineum
Thhalv10009599m.g Eutrema salsugineum
Thhalv10028418m.g Eutrema salsugineum
TPR.G10305 Trifolium pratense
TPR.G12877 Trifolium pratense
TPR.G37805 Trifolium pratense
TWI14G1346 Tripterygium wilfordii
TWI23G1246 Tripterygium wilfordii
unitig_0.g2857 Utricularia gibba
unitig_22.g5354 Utricularia gibba
unitig_26.g9306 Utricularia gibba
unitig_26.g9737 Utricularia gibba
unitig_46.g18549 Utricularia gibba
unitig_749.g14352 Utricularia gibba
unitig_749.g14353 Utricularia gibba
unitig_8.g3801 Utricularia gibba
vmacro13276 Vaccinium macrocarpon
vmacro13960 Vaccinium macrocarpon
vmacro20942 Vaccinium macrocarpon
VMungo0251G2745 Vigna mungo
VMungo0331G0247 Vigna mungo
VMungo0540G1977 Vigna mungo
VMungo1127G0642 Vigna mungo
VMungo1383G1285 Vigna mungo
Zm00001eb022940 Zea mays
Zm00001eb074270 Zea mays
Zm00001eb391740 Zea mays
Zm00001eb404360 Zea mays

User provided reference genes

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