Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p06300 Brassica napus
A06p06370 Brassica napus
A08p34410 Brassica napus
A08p34460 Brassica napus
A09p18840 Brassica napus
A09p65330 Brassica napus
Aa31LG1G5300 Aethionema arabicum
Aa31LG1G5420 Aethionema arabicum
Aa31LG2G11080 Aethionema arabicum
Aa31LG2G11250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.897 Anthoceros agrestis
Actinidia01169 Actinidia chinensis
Actinidia04304 Actinidia chinensis
Ah.04g152670 Amaranthus hybridus
Ah.13g075600 Amaranthus hybridus
AL1G20120 Arabidopsis lyrata
AL1G20240 Arabidopsis lyrata
AL1G67290 Arabidopsis lyrata
AL2G18590 Arabidopsis lyrata
AL5G39490 Arabidopsis lyrata
Aqoxy3G04251 Aquilegia oxysepala
Aqoxy5G02928 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.26JEDM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3CB71M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4286YA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6N2UFZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7AF3EL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7E980Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FVM0T0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I1N2IP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LE2Y29 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QDGG7S Arachis hypogaea
AT1G09590 Arabidopsis thaliana
AT1G09690 Arabidopsis thaliana
AT1G57660 Arabidopsis thaliana
AT1G57860 Arabidopsis thaliana
ATR0582G198 Amborella trichopoda
ATR0598G347 Amborella trichopoda
Atru.chr7.321 Acer truncatum
Atru.chr8.1178 Acer truncatum
Atru.chr9.391 Acer truncatum
Atru.chr9.392 Acer truncatum
AUR62012017 Chenopodium quinoa
AUR62015315 Chenopodium quinoa
BcaB03g13305 Brassica carinata
BcaB03g13314 Brassica carinata
BcaB04g20174 Brassica carinata
BcaB07g31147 Brassica carinata
BcaC04g22087 Brassica carinata
BcaC07g38521 Brassica carinata
BcaC07g41862 Brassica carinata
BcaC07g41865 Brassica carinata
BcaC07g41871 Brassica carinata
BolC5t29516H Brassica oleracea
BolC5t29528H Brassica oleracea
BolC8t48933H Brassica oleracea
BolC8t48940H Brassica oleracea
BolC8t52464H Brassica oleracea
BolC8t52469H Brassica oleracea
BolC9t55282H Brassica oleracea
BraA06t23840Z Brassica rapa
BraA06t23848Z Brassica rapa
BraA08t35353Z Brassica rapa
BraA08t35358Z Brassica rapa
BraA09t37505Z Brassica rapa
BraA09t41878Z Brassica rapa
C05p07640 Brassica napus
C05p07770 Brassica napus
C08p13030 Brassica napus
C08p13120 Brassica napus
C08p49290 Brassica napus
C08p49320 Brassica napus
C08p49380 Brassica napus
C09p23620 Brassica napus
CAN.G128.53 Capsicum annuum
CAN.G960.16 Capsicum annuum
CANSAT64G0417 Cannabis sativa
CANSAT64G1843 Cannabis sativa
CANSAT78G2072 Cannabis sativa
CARHR009570 Cardamine hirsuta
CARHR009660 Cardamine hirsuta
CARHR054330 Cardamine hirsuta
CARHR054520 Cardamine hirsuta
CARHR183900 Cardamine hirsuta
Carub.0001s0894 Capsella rubella
Carub.0001s0903 Capsella rubella
Carub.0002s0669 Capsella rubella
Carub.0002s0698 Capsella rubella
Ca_09102_v3 Cicer arietinum L.
Ca_28223_v3 Cicer arietinum L.
CBR_g3656 Chara braunii
Cc06_g15600 Coffea canephora
CDE04G3317 Ceratophyllum demersum
CDE06G1549 Ceratophyllum demersum
CDE07G0035 Ceratophyllum demersum
Cfa008676 Carpinus fangiana
Cfa008678 Carpinus fangiana
Cfa009478 Carpinus fangiana
Cfa024277 Carpinus fangiana
Ciclev10012788m.g Citrus clementina
CiPaw.01G110400 Carya illinoinensis
CiPaw.02G061600 Carya illinoinensis
CiPaw.08G056500 Carya illinoinensis
ClCG10G017740 Citrullus lanatus
COL.COLO4_16465 Corchorus olitorius
COL.COLO4_29386 Corchorus olitorius
COL.COLO4_37696 Corchorus olitorius
Cpa.g.sc113.10 Carica papaya
Cpa.g.sc113.11 Carica papaya
Cre06.g278135 Chlamydomonas reinhardtii
CsaV3_3G038560 Cucumis sativus L.
CsaV3_7G005620 Cucumis sativus L.
CSS0003200 Camellia sinensis var. sinensis
CSS0003292 Camellia sinensis var. sinensis
CSS0012431 Camellia sinensis var. sinensis
CSS0027127 Camellia sinensis var. sinensis
CSS0027387 Camellia sinensis var. sinensis
CSS0038592 Camellia sinensis var. sinensis
CSS0046138 Camellia sinensis var. sinensis
DCAR_009692 Daucus carota
DCAR_013663 Daucus carota
Dinv16355 Davidia involucrata
Dinv24053 Davidia involucrata
Duzib093G0481 Durio zibethinus
Duzib106G0536 Durio zibethinus
Duzib128G0246 Durio zibethinus
ECA233G5597 Erigeron canadensis
ECA236G4301 Erigeron canadensis
EL10Ac3g06868 Beta vulgaris
Eucgr.A02495 Eucalyptus grandis
Eucgr.B03573 Eucalyptus grandis
FAN02G2032 Fragaria x ananassa
FAN05G2876 Fragaria x ananassa
FAN07G2962 Fragaria x ananassa
FAN09G0560 Fragaria x ananassa
FAN12G1557 Fragaria x ananassa
FAN14G2088 Fragaria x ananassa
FAN14G4412 Fragaria x ananassa
FAN17G3044 Fragaria x ananassa
FvH4_4g22080 Fragaria vesca
FvH4_6g21700 Fragaria vesca
Glyma.03G207500 Glycine max
Glyma.06G207400 Glycine max
Glyma.19G205000 Glycine max
Gohir.A01G198300 Gossypium hirsutum
Gohir.A09G129200 Gossypium hirsutum
Gohir.A09G129300 Gossypium hirsutum
Gohir.D01G188500 Gossypium hirsutum
Gohir.D04G090900 Gossypium hirsutum
Gohir.D09G125200 Gossypium hirsutum
Gohir.D09G125300 Gossypium hirsutum
Gorai.002G231800 Gossypium raimondii
Gorai.006G144200 Gossypium raimondii
Gorai.006G144300 Gossypium raimondii
Gorai.009G391900 Gossypium raimondii
GSVIVG01001130001 Vitis vinifera
GSVIVG01033444001 Vitis vinifera
GSVIVG01033455001 Vitis vinifera
HanXRQChr04g0123221 Helianthus annuus
HanXRQChr09g0238371 Helianthus annuus
HanXRQChr09g0252901 Helianthus annuus
HanXRQChr14g0438341 Helianthus annuus
Haze_11696 Corylus avellana
Haze_11707 Corylus avellana
Haze_12536 Corylus avellana
Haze_22473 Corylus avellana
Haze_27635 Corylus avellana
Hma1.2p1_0124F.1_g058250 Hydrangea macrophylla
HPP92_002780 Vanilla planifolia
HPP92_028237 Vanilla planifolia
Hund19216 Selenicereus undatus
Hund26542 Selenicereus undatus
Lalb_Chr01g0017601 Lupinus albus
Lalb_Chr20g0111021 Lupinus albus
Lalb_Chr25g0287591 Lupinus albus
Lj1g0017452 Lotus japonicus
Lj2A364T23 Lonicera japonica
Lju124A23G68 Lonicera japonica
Lsat_1_v5_gn_1_60041 Lactuca sativa
Lsat_1_v5_gn_2_118960 Lactuca sativa
Lsat_1_v5_gn_2_56521 Lactuca sativa
Lsat_1_v5_gn_6_37201 Lactuca sativa
Lsat_1_v5_gn_9_31161 Lactuca sativa
Manes.08G041300 Manihot esculenta
Manes.09G039200 Manihot esculenta
Mapoly0052s0065 Marchantia polymorpha
MBI11_g13141_MAGBIO Magnolia biondii
MBI13_g29630_MAGBIO Magnolia biondii
MBI19_g17435_MAGBIO Magnolia biondii
MCO08G285 Micromonas commoda
MD12G1053800 Malus domestica
MD14G1052100 Malus domestica
Medtr1g069905 Medicago truncatula
Medtr7g107420 Medicago truncatula
MELO3C009600.2 Cucumis melo
Migut.J01856 Erythranthe guttata
Migut.K00025 Erythranthe guttata
MSTRG.10852 Avicennia marina
MSTRG.183 Avicennia marina
MSTRG.19920 Avicennia marina
Nitab4.5_0000009g0100 Nicotiana tabacum
Nitab4.5_0000358g0030 Nicotiana tabacum
Nitab4.5_0000457g0280 Nicotiana tabacum
Nitab4.5_0000698g0060 Nicotiana tabacum
Nitab4.5_0000991g0050 Nicotiana tabacum
Nitab4.5_0001079g0080 Nicotiana tabacum
Nitab4.5_0001440g0040 Nicotiana tabacum
Nitab4.5_0002939g0030 Nicotiana tabacum
Nitab4.5_0004917g0070 Nicotiana tabacum
Nn2g15778 Nelumbo nucifera
Nn3g16185 Nelumbo nucifera
Nn7g35931 Nelumbo nucifera
Oeu035921.1 Olea europaea
Oeu038574.1 Olea europaea
Oeu038834.1 Olea europaea
Oeu046719.1 Olea europaea
Oeu057584.1 Olea europaea
Oeu063861.1 Olea europaea
Os03g0141000 Oryza sativa ssp. japonica
Os10g0465800 Oryza sativa ssp. japonica
Peaxi162Scf00003g04620 Petunia axillaris
Peaxi162Scf00249g01214 Petunia axillaris
PGR004G0342 Punica granatum
PGR102G1417 Punica granatum
PGR119G0917 Punica granatum
PGSC0003DMG400011449 Solanum tuberosum
PGSC0003DMG400023667 Solanum tuberosum
Phvul.001G200900 Phaseolus vulgaris
Phvul.001G201000 Phaseolus vulgaris
Potri.001G071100 Populus trichocarpa
Potri.003G159500 Populus trichocarpa
Potri.006G195400 Populus trichocarpa
Potri.016G061100 Populus trichocarpa
Pp3c12_9320 Physcomitrium patens
Pp3c13_2360 Physcomitrium patens
Pp3c3_5550 Physcomitrium patens
Pp3c4_21520 Physcomitrium patens
Prupe.1G210800 Prunus persica
Prupe.7G083200 Prunus persica
Prupe.7G095700 Prunus persica
Psat5g226880 Pisum sativum
Psat5g280560 Pisum sativum
Psat6g041840 Pisum sativum
Psat7g139320 Pisum sativum
PSO017G5025 Papaver somniferum
PSO339G0405 Papaver somniferum
PSO384G2399 Papaver somniferum
PSO478G4530 Papaver somniferum
PSO601G0019 Papaver somniferum
PSO724G0880 Papaver somniferum
PSO729G0132 Papaver somniferum
QL03p047996 Quercus lobata
QL06p028085 Quercus lobata
RcHm_v2.0_Chr2g0157681 Rosa chinensis
RcHm_v2.0_Chr3g0478971 Rosa chinensis
RcHm_v2.0_Chr4g0428341 Rosa chinensis
Rhsim01G0275700 Rhododendron simsii
Rhsim12G0127600 Rhododendron simsii
Sabra01G0050000 Salix brachista
Sabra03G0115900 Salix brachista
Sabra06G0150200 Salix brachista
Sabra16G0063700 Salix brachista
SalBow1G5281 Salvia bowleyana
SalBow1G5798 Salvia bowleyana
SalBow1G8124 Salvia bowleyana
SalBow6G4753 Salvia bowleyana
Sc01g0003390 Simmondsia chinensis
Sc19g0006110 Simmondsia chinensis
Sc25g0005060 Simmondsia chinensis
Sed0001343 Sechium edule
Sed0026567 Sechium edule
SEGI_40312 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10286 Striga asiatica
SGA_v2.0_scaffold359G49846 Striga asiatica
SGA_v2.0_scaffold69G23050 Striga asiatica
SHI30051 Sapria himalayana
SMO117G0025 Selaginella moellendorffii
Solyc10g078960.2 Solanum lycopersicum
Solyc10g080590.2 Solanum lycopersicum
Sopen10g029590 Solanum pennellii
Sopen10g031130 Solanum pennellii
Sp1g08200 Schrenkiella parvula
Sp1g08280 Schrenkiella parvula
Sp2g05630 Schrenkiella parvula
Sp2g05830 Schrenkiella parvula
TAR369G0657 Trochodendron aralioides
TAR622G0601 Trochodendron aralioides
TAR623G1313 Trochodendron aralioides
THA.LOC104799826 Tarenaya hassleriana
THA.LOC104806702 Tarenaya hassleriana
THA.LOC104816832 Tarenaya hassleriana
THA.LOC104820368 Tarenaya hassleriana
THA.LOC104823707 Tarenaya hassleriana
Thecc.05G023400 Theobroma cacao
Thecc.05G177200 Theobroma cacao
Thecc.05G177500 Theobroma cacao
Thhalv10008951m.g Eutrema salsugineum
Thhalv10008955m.g Eutrema salsugineum
Thhalv10023727m.g Eutrema salsugineum
Thhalv10023728m.g Eutrema salsugineum
TPR.G30725 Trifolium pratense
TPR.G32277 Trifolium pratense
TPR.G36895 Trifolium pratense
TWI32G0785 Tripterygium wilfordii
TWI53G0522 Tripterygium wilfordii
TWI60G0322 Tripterygium wilfordii
TWI74G0261 Tripterygium wilfordii
TWI74G0658 Tripterygium wilfordii
TWI74G1050 Tripterygium wilfordii
TWI77G0615 Tripterygium wilfordii
unitig_0.g258 Utricularia gibba
unitig_0.g527 Utricularia gibba
unitig_60.g25518 Utricularia gibba
unitig_62.g23847 Utricularia gibba
unitig_64.g29786 Utricularia gibba
vmacro16307 Vaccinium macrocarpon
vmacro22114 Vaccinium macrocarpon
VMungo1127G0655 Vigna mungo
Zm00001eb003420 Zea mays
Zm00001eb046340 Zea mays
Zm00001eb222240 Zea mays
Zm00001eb402880 Zea mays

User provided reference genes

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