Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34210 Brassica napus
A03p41840 Brassica napus
Aa31LG8G7400 Aethionema arabicum
Aa31LG8G7410 Aethionema arabicum
Actinidia05537 Actinidia chinensis
Actinidia09932 Actinidia chinensis
Actinidia25406 Actinidia chinensis
Actinidia26952 Actinidia chinensis
Actinidia33713 Actinidia chinensis
AL3G34450 Arabidopsis lyrata
AL3G34460 Arabidopsis lyrata
AL3G34470 Arabidopsis lyrata
Aqoxy4G00179 Aquilegia oxysepala
Aqoxy4G00180 Aquilegia oxysepala
Aqoxy4G02006 Aquilegia oxysepala
Aqoxy4G02007 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.TAH91K Arachis hypogaea
AT3G20590 Arabidopsis thaliana
AT3G20600 Arabidopsis thaliana
AT3G20610 Arabidopsis thaliana
ATR0794G057 Amborella trichopoda
ATR0794G125 Amborella trichopoda
Atru.chr10.2137 Acer truncatum
Atru.chr2.3214 Acer truncatum
AUR62012636 Chenopodium quinoa
AUR62015648 Chenopodium quinoa
AUR62015649 Chenopodium quinoa
AUR62015650 Chenopodium quinoa
AUR62015651 Chenopodium quinoa
AUR62015652 Chenopodium quinoa
AUR62020549 Chenopodium quinoa
AUR62020550 Chenopodium quinoa
AUR62020551 Chenopodium quinoa
AUR62020552 Chenopodium quinoa
BcaB04g19117 Brassica carinata
BcaB04g20643 Brassica carinata
BcaB06g26124 Brassica carinata
BcaB06g26125 Brassica carinata
BcaB06g26126 Brassica carinata
BcaC01g03546 Brassica carinata
BcaC05g28307 Brassica carinata
BcaC05g28309 Brassica carinata
BcaC05g28310 Brassica carinata
BcaC09g49003 Brassica carinata
BolC1t04321H Brassica oleracea
BolC3t17412H Brassica oleracea
BolC5t33084H Brassica oleracea
BolC5t33085H Brassica oleracea
BraA01t03521Z Brassica rapa
BraA03t13337Z Brassica rapa
BraA05t21707Z Brassica rapa
C01p43600 Brassica napus
C03p51220 Brassica napus
C05p43700 Brassica napus
C05p43710 Brassica napus
C05p43720 Brassica napus
CAN.G140.6 Capsicum annuum
CAN.G140.7 Capsicum annuum
CANSAT64G1415 Cannabis sativa
CARHR096380 Cardamine hirsuta
CARHR096390 Cardamine hirsuta
Carub.0003s2057 Capsella rubella
Carub.0003s2058 Capsella rubella
Ca_01751_v3 Cicer arietinum L.
Cc05_g13270 Coffea canephora
Cfa020411 Carpinus fangiana
Cfa020412 Carpinus fangiana
Cfa021640 Carpinus fangiana
Cfa021641 Carpinus fangiana
Cfa021642 Carpinus fangiana
Ciclev10009510m.g Citrus clementina
Ciclev10016810m.g Citrus clementina
Ciclev10017718m.g Citrus clementina
CiPaw.09G085400 Carya illinoinensis
CiPaw.09G086400 Carya illinoinensis
CiPaw.09G086500 Carya illinoinensis
CiPaw.10G067700 Carya illinoinensis
CiPaw.11G184100 Carya illinoinensis
CiPaw.11G184300 Carya illinoinensis
ClCG03G005020 Citrullus lanatus
ClCG05G014750 Citrullus lanatus
COL.COLO4_09575 Corchorus olitorius
Cpa.g.c26548.3 Carica papaya
Cpa.g.sc81.25 Carica papaya
CsaV3_3G023120 Cucumis sativus L.
CSS0011359 Camellia sinensis var. sinensis
CSS0011499 Camellia sinensis var. sinensis
CSS0043809 Camellia sinensis var. sinensis
DCAR_008380 Daucus carota
DCAR_008381 Daucus carota
DCAR_008382 Daucus carota
DCAR_008383 Daucus carota
DCAR_008384 Daucus carota
DCAR_008386 Daucus carota
DCAR_019578 Daucus carota
DCAR_019579 Daucus carota
DCAR_019582 Daucus carota
DCAR_020515 Daucus carota
DCAR_020516 Daucus carota
DCAR_022525 Daucus carota
DCAR_022526 Daucus carota
DCAR_022527 Daucus carota
Dinv18891 Davidia involucrata
Dinv20008 Davidia involucrata
Dinv22303 Davidia involucrata
Dinv40711 Davidia involucrata
Duzib170G0757 Durio zibethinus
Duzib192G0918 Durio zibethinus
Duzib213G0251 Durio zibethinus
Duzib213G0394 Durio zibethinus
Duzib235G0538 Durio zibethinus
Duzib235G0905 Durio zibethinus
ECA236G0028 Erigeron canadensis
EL10Ac4g07955 Beta vulgaris
EL10Ac4g07956 Beta vulgaris
EL10Ac4g07957 Beta vulgaris
Eucgr.B00837 Eucalyptus grandis
Eucgr.D00820 Eucalyptus grandis
Eucgr.F00979 Eucalyptus grandis
Eucgr.F00981 Eucalyptus grandis
FAN11G3928 Fragaria x ananassa
FAN16G0462 Fragaria x ananassa
FAN21G3193 Fragaria x ananassa
FAN21G3944 Fragaria x ananassa
FAN25G0723 Fragaria x ananassa
FvH4_3g02720 Fragaria vesca
FvH4_3g21890 Fragaria vesca
Glyma.06G269200 Glycine max
Glyma.10G129900 Glycine max
Glyma.11G003000 Glycine max
Glyma.12G214100 Glycine max
Glyma.13G287500 Glycine max
Gohir.A01G074800 Gossypium hirsutum
Gohir.A06G144950 Gossypium hirsutum
Gohir.A10G015700 Gossypium hirsutum
Gohir.A10G015750 Gossypium hirsutum
Gohir.A13G141050 Gossypium hirsutum
Gohir.D01G061300 Gossypium hirsutum
Gohir.D06G151332 Gossypium hirsutum
Gohir.D10G015700 Gossypium hirsutum
Gohir.D10G015750 Gossypium hirsutum
Gohir.D13G145801 Gossypium hirsutum
Gorai.002G082700 Gossypium raimondii
Gorai.010G176400 Gossypium raimondii
Gorai.011G017400 Gossypium raimondii
Gorai.011G017500 Gossypium raimondii
Gorai.013G163600 Gossypium raimondii
Haze_09616 Corylus avellana
Haze_09617 Corylus avellana
Hma1.2p1_0729F.1_g209600 Hydrangea macrophylla
Hma1.2p1_0729F.1_g209610 Hydrangea macrophylla
Hma1.2p1_1564F.1_g290830 Hydrangea macrophylla
Hma1.2p1_1564F.1_g290840 Hydrangea macrophylla
Hma1.2p1_1869F.1_g306050 Hydrangea macrophylla
Hma1.2p1_1869F.1_g306060 Hydrangea macrophylla
Lalb_Chr14g0366161 Lupinus albus
Lj1g0010741 Lotus japonicus
Lj3g0020040 Lotus japonicus
Lj8C77T4 Lonicera japonica
Lj8C77T5 Lonicera japonica
Lj8P166T75 Lonicera japonica
Lsat_1_v5_gn_3_120800 Lactuca sativa
Lsat_1_v5_gn_3_1981 Lactuca sativa
Lsat_1_v5_gn_5_5781 Lactuca sativa
Lsat_1_v5_gn_7_16941 Lactuca sativa
Manes.03G123200 Manihot esculenta
Manes.15G076400 Manihot esculenta
Manes.17G029300 Manihot esculenta
MBI02_g10994_MAGBIO Magnolia biondii
MBI18_g40467_MAGBIO Magnolia biondii
MBI18_g41997_MAGBIO Magnolia biondii
MBI18_g44236_MAGBIO Magnolia biondii
MBI18_g44237_MAGBIO Magnolia biondii
MBI18_g44238_MAGBIO Magnolia biondii
MD03G1210900 Malus domestica
MD03G1211000 Malus domestica
MD03G1211100 Malus domestica
MD05G1340600 Malus domestica
MD10G1314100 Malus domestica
MD11G1225800 Malus domestica
Medtr2g082990 Medicago truncatula
Medtr4g081200 Medicago truncatula
Medtr7g109260 Medicago truncatula
MELO3C018104.2 Cucumis melo
Migut.M00290 Erythranthe guttata
Migut.M00291 Erythranthe guttata
Migut.M00312 Erythranthe guttata
Migut.M00321 Erythranthe guttata
Migut.M00323 Erythranthe guttata
Migut.M00324 Erythranthe guttata
Migut.M00327 Erythranthe guttata
Migut.M00328 Erythranthe guttata
Migut.M01810 Erythranthe guttata
MSTRG.14416 Avicennia marina
Nitab4.5_0000092g0090 Nicotiana tabacum
Nitab4.5_0000397g0050 Nicotiana tabacum
Nitab4.5_0005041g0020 Nicotiana tabacum
Nitab4.5_0018891g0010 Nicotiana tabacum
Nn1g03650 Nelumbo nucifera
Nn1g03652 Nelumbo nucifera
Nn1g07007 Nelumbo nucifera
Nn1g07008 Nelumbo nucifera
Oeu007631.2 Olea europaea
Oeu007632.1 Olea europaea
Oeu025490.1 Olea europaea
Oeu025495.1 Olea europaea
Oeu025506.1 Olea europaea
Oeu025507.1 Olea europaea
Oeu037342.1 Olea europaea
Oeu037345.1 Olea europaea
Oeu042915.1 Olea europaea
Oeu051228.1 Olea europaea
Oeu062613.1 Olea europaea
Peaxi162Scf00192g00005 Petunia axillaris
Peaxi162Scf01086g00113 Petunia axillaris
Peaxi162Scf01086g00158 Petunia axillaris
PGR004G0337 Punica granatum
PGR083G2635 Punica granatum
PGSC0003DMG400002090 Solanum tuberosum
PGSC0003DMG400025621 Solanum tuberosum
PGSC0003DMG400032148 Solanum tuberosum
PGSC0003DMG400032231 Solanum tuberosum
Phvul.005G091900 Phaseolus vulgaris
Phvul.011G139900 Phaseolus vulgaris
Potri.001G418000 Populus trichocarpa
Potri.004G023400 Populus trichocarpa
Potri.011G133900 Populus trichocarpa
Prupe.4G026900 Prunus persica
Prupe.4G027000 Prunus persica
Prupe.4G204400 Prunus persica
Prupe.6G166500 Prunus persica
Psat3g020720 Pisum sativum
Psat5g251880 Pisum sativum
Psat7g161480 Pisum sativum
PSO017G0621 Papaver somniferum
PSO017G2212 Papaver somniferum
PSO017G7112 Papaver somniferum
PSO063G2330 Papaver somniferum
PSO063G4351 Papaver somniferum
PSO063G7368 Papaver somniferum
PSO170G3882 Papaver somniferum
PSO210G3167 Papaver somniferum
PSO302G0041 Papaver somniferum
PSO302G0191 Papaver somniferum
PSO349G0281 Papaver somniferum
PSO500G0109 Papaver somniferum
PSO541G2417 Papaver somniferum
PSO541G2674 Papaver somniferum
PSO541G3356 Papaver somniferum
PSO541G3516 Papaver somniferum
PSO541G5395 Papaver somniferum
PSO675G1570 Papaver somniferum
PSO675G3057 Papaver somniferum
PSO675G3505 Papaver somniferum
PSO675G4306 Papaver somniferum
PSO675G4486 Papaver somniferum
PSO675G4715 Papaver somniferum
PSO675G4979 Papaver somniferum
PSO675G5185 Papaver somniferum
PSO675G5459 Papaver somniferum
PSO675G5485 Papaver somniferum
PSO675G5832 Papaver somniferum
PSO675G6218 Papaver somniferum
PSO675G6910 Papaver somniferum
PSO675G9369 Papaver somniferum
PSO732G0449 Papaver somniferum
PSO832G1891 Papaver somniferum
PSO832G2469 Papaver somniferum
QL05p075311 Quercus lobata
QL05p075313 Quercus lobata
QL08p013247 Quercus lobata
RcHm_v2.0_Chr5g0004101 Rosa chinensis
RcHm_v2.0_Chr5g0004121 Rosa chinensis
RcHm_v2.0_Chr5g0037701 Rosa chinensis
Rhsim06G0028800 Rhododendron simsii
Rhsim13G0158000 Rhododendron simsii
Rhsim13G0158100 Rhododendron simsii
RhsimUnG0253100 Rhododendron simsii
Sabra11G0120300 Salix brachista
Sabra16G0283800 Salix brachista
SalBow7G1217 Salvia bowleyana
SalBow7G1417 Salvia bowleyana
SalBow7G3313 Salvia bowleyana
SalBow7G4713 Salvia bowleyana
SalBow8G3023 Salvia bowleyana
SalBow8G4741 Salvia bowleyana
Sc01g0007380 Simmondsia chinensis
Sed0007986 Sechium edule
Sed0026241 Sechium edule
SGA_v2.0_scaffold27G11640 Striga asiatica
SGA_v2.0_scaffold7G03888 Striga asiatica
Solyc01g006320.4 Solanum lycopersicum
Sopen01g002320 Solanum pennellii
Sopen02g024810 Solanum pennellii
Sopen12g001210 Solanum pennellii
Sp3g18610 Schrenkiella parvula
Sp3g18630 Schrenkiella parvula
Sp3g18640 Schrenkiella parvula
Sp3g18650 Schrenkiella parvula
TAR626G0982 Trochodendron aralioides
TAR626G1743 Trochodendron aralioides
TAR626G1859 Trochodendron aralioides
TAR629G2752 Trochodendron aralioides
TAR629G2849 Trochodendron aralioides
THA.LOC104817885 Tarenaya hassleriana
Thecc.06G213400 Theobroma cacao
Thecc.07G052100 Theobroma cacao
Thhalv10021500m.g Eutrema salsugineum
Thhalv10022399m.g Eutrema salsugineum
TPR.G20274 Trifolium pratense
TPR.G20296 Trifolium pratense
TPR.G25922 Trifolium pratense
TPR.G36815 Trifolium pratense
TWI38G0302 Tripterygium wilfordii
TWI38G0471 Tripterygium wilfordii
TWI38G1319 Tripterygium wilfordii
TWI38G1606 Tripterygium wilfordii
TWI39G0180 Tripterygium wilfordii
unitig_0.g2738 Utricularia gibba
VMungo1080G1659 Vigna mungo
VMungo1127G0373 Vigna mungo
VMungo1215G2268 Vigna mungo

User provided reference genes

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